RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 ARIH2O95376 493 aa2.78□□□□□ -1.96
GABPB1-209ENST00000559100 MPIG6BO95866 241 aa2.78□□□□□ -1.96
GABPB1-209ENST00000559100 PRNPP04156 253 aa2.78□□□□□ -1.96
GABPB1-209ENST00000559100 CYP2C8P10632 490 aa2.78□□□□□ -1.96
GABPB1-209ENST00000559100 KITP10721 976 aa2.78□□□□□ -1.96
GABPB1-209ENST00000559100 MYF5P13349 255 aa2.78□□□□□ -1.96
GABPB1-209ENST00000559100 CD53P19397 219 aa2.78□□□□□ -1.96
GABPB1-209ENST00000559100 PPM1AP35813 382 aa2.78□□□□□ -1.96
GABPB1-209ENST00000559100 TECP42680 631 aa2.78□□□□□ -1.96
GABPB1-209ENST00000559100 AFMP43652 599 aa2.78□□□□□ -1.96
GABPB1-209ENST00000559100 TM4SF4P48230 202 aa2.78□□□□□ -1.96
GABPB1-209ENST00000559100 RENBPP51606 427 aa2.78□□□□□ -1.96
GABPB1-209ENST00000559100 IL13RA1P78552 427 aa2.78□□□□□ -1.96
GABPB1-209ENST00000559100 TNFAIP2Q03169 654 aa2.78□□□□□ -1.96
GABPB1-209ENST00000559100 PLS1Q14651 629 aa2.78□□□□□ -1.96
GABPB1-209ENST00000559100 STARD3Q14849 445 aa2.78□□□□□ -1.96
GABPB1-209ENST00000559100 MAN2A1Q16706 1144 aa2.78□□□□□ -1.96
GABPB1-209ENST00000559100 CR1LQ2VPA4 569 aa2.78□□□□□ -1.96
GABPB1-209ENST00000559100 TMEM95Q3KNT9 176 aa2.78□□□□□ -1.96
GABPB1-209ENST00000559100 KHDC1Q4VXA5 237 aaKnown RBP2.78□□□□□ -1.96
GABPB1-209ENST00000559100 ALFQ53S48 1182 aa2.78□□□□□ -1.96
GABPB1-209ENST00000559100 KHDC1LQ5JSQ8 128 aa2.78□□□□□ -1.96
GABPB1-209ENST00000559100 ZNF648Q5T619 568 aaPredicted RBP2.78□□□□□ -1.96
GABPB1-209ENST00000559100 GRAMD4Q6IC98 578 aa2.78□□□□□ -1.96
GABPB1-209ENST00000559100 CCDC70Q6NSX1 233 aa2.78□□□□□ -1.96
GABPB1-209ENST00000559100 SWSAP1Q6NVH7 229 aa2.78□□□□□ -1.96
GABPB1-209ENST00000559100 STK32CQ86UX6 486 aa2.78□□□□□ -1.96
GABPB1-209ENST00000559100 MIB1Q86YT6 1006 aa2.78□□□□□ -1.96
GABPB1-209ENST00000559100 SLC41A1Q8IVJ1 513 aa2.78□□□□□ -1.96
GABPB1-209ENST00000559100 PQLC1Q8N2U9 271 aa2.78□□□□□ -1.96
GABPB1-209ENST00000559100 MYCT1Q8N699 235 aa2.78□□□□□ -1.96
GABPB1-209ENST00000559100 SPATA5Q8NB90 893 aa2.78□□□□□ -1.96
GABPB1-209ENST00000559100 AGBL5Q8NDL9 886 aa2.78□□□□□ -1.96
GABPB1-209ENST00000559100 GPR156Q8NFN8 814 aa2.78□□□□□ -1.96
GABPB1-209ENST00000559100 OR2I1PQ8NGU4 316 aa2.78□□□□□ -1.96
GABPB1-209ENST00000559100 PHKBQ93100 1093 aa2.78□□□□□ -1.96
GABPB1-209ENST00000559100 KIAA1191Q96A73 305 aa2.78□□□□□ -1.96
GABPB1-209ENST00000559100 SHISA4Q96DD7 197 aa2.78□□□□□ -1.96
GABPB1-209ENST00000559100 APIPQ96GX9 242 aa2.78□□□□□ -1.96
GABPB1-209ENST00000559100 INTS4Q96HW7 963 aaKnown RBP2.78□□□□□ -1.96
GABPB1-209ENST00000559100 KIRREL1Q96J84 757 aa2.78□□□□□ -1.96
GABPB1-209ENST00000559100 TMX3Q96JJ7 454 aa2.78□□□□□ -1.96
GABPB1-209ENST00000559100 WDR92Q96MX6 357 aa2.78□□□□□ -1.96
GABPB1-209ENST00000559100 CLIC6Q96NY7 704 aa2.78□□□□□ -1.96
GABPB1-209ENST00000559100 UIMC1Q96RL1 719 aa2.78□□□□□ -1.96
GABPB1-209ENST00000559100 TMEM209Q96SK2 561 aa2.78□□□□□ -1.96
GABPB1-209ENST00000559100 PDGFDQ9GZP0 370 aaPredicted RBP2.78□□□□□ -1.96
GABPB1-209ENST00000559100 PITHD1Q9GZP4 211 aaPredicted RBP2.78□□□□□ -1.96
GABPB1-209ENST00000559100 SENP6Q9GZR1 1112 aaPredicted RBP2.78□□□□□ -1.96
GABPB1-209ENST00000559100 BTBD1Q9H0C5 482 aa2.78□□□□□ -1.96
GABPB1-209ENST00000559100 TMX4Q9H1E5 349 aaPredicted RBP2.78□□□□□ -1.96
GABPB1-209ENST00000559100 LDAHQ9H6V9 325 aa2.78□□□□□ -1.96
GABPB1-209ENST00000559100 ZMAT3Q9HA38 289 aaKnown RBP2.78□□□□□ -1.96
GABPB1-209ENST00000559100 DCP1AQ9NPI6 582 aaPredicted RBP2.78□□□□□ -1.96
GABPB1-209ENST00000559100 PAK6Q9NQU5 681 aaPredicted RBP2.78□□□□□ -1.96
GABPB1-209ENST00000559100 STARD7Q9NQZ5 370 aa2.78□□□□□ -1.96
GABPB1-209ENST00000559100 DLL4Q9NR61 685 aa2.78□□□□□ -1.96
GABPB1-209ENST00000559100 SLTMQ9NWH9 1034 aaKnown RBP eCLIP2.78□□□□□ -1.96
GABPB1-209ENST00000559100 FEZ2Q9UHY8 353 aaPredicted RBP2.78□□□□□ -1.96
GABPB1-209ENST00000559100 CDC42EP3Q9UKI2 254 aa2.78□□□□□ -1.96
GABPB1-209ENST00000559100 ADAMTS6Q9UKP5 1117 aa2.78□□□□□ -1.96
GABPB1-209ENST00000559100 PCDHA6Q9UN73 950 aa2.78□□□□□ -1.96
GABPB1-209ENST00000559100 CTNND2Q9UQB3 1225 aa2.78□□□□□ -1.96
GABPB1-209ENST00000559100 LZTS1Q9Y250 596 aa2.78□□□□□ -1.96
GABPB1-209ENST00000559100 A0A088AWK7 358 aa2.77□□□□□ -1.97
GABPB1-209ENST00000559100 FOXN3O00409 490 aaPredicted RBP2.77□□□□□ -1.97
GABPB1-209ENST00000559100 DDX3XO00571 662 aaKnown RBP eCLIP2.77□□□□□ -1.97
GABPB1-209ENST00000559100 SUV39H1O43463 412 aa2.77□□□□□ -1.97
GABPB1-209ENST00000559100 SLC26A4O43511 780 aa2.77□□□□□ -1.97
GABPB1-209ENST00000559100 NCK2O43639 380 aa2.77□□□□□ -1.97
GABPB1-209ENST00000559100 PHF2O75151 1096 aa2.77□□□□□ -1.97
GABPB1-209ENST00000559100 RNASE1P07998 156 aaKnown RBP2.77□□□□□ -1.97
GABPB1-209ENST00000559100 PARP1P09874 1014 aaKnown RBP2.77□□□□□ -1.97
GABPB1-209ENST00000559100 LTA4HP09960 611 aaKnown RBP2.77□□□□□ -1.97
GABPB1-209ENST00000559100 HNRNPLP14866 589 aaKnown RBP eCLIP2.77□□□□□ -1.97
GABPB1-209ENST00000559100 RPL17P18621 184 aaKnown RBP2.77□□□□□ -1.97
GABPB1-209ENST00000559100 CTSSP25774 331 aa2.77□□□□□ -1.97
GABPB1-209ENST00000559100 WASP42768 502 aa2.77□□□□□ -1.97
GABPB1-209ENST00000559100 MAPK9P45984 424 aa2.77□□□□□ -1.97
GABPB1-209ENST00000559100 KCNJ5P48544 419 aa2.77□□□□□ -1.97
GABPB1-209ENST00000559100 CCT5P48643 541 aa2.77□□□□□ -1.97
GABPB1-209ENST00000559100 KCNQ1P51787 676 aa2.77□□□□□ -1.97
GABPB1-209ENST00000559100 HK3P52790 923 aa2.77□□□□□ -1.97
GABPB1-209ENST00000559100 CDC42EP1Q00587 391 aa2.77□□□□□ -1.97
GABPB1-209ENST00000559100 MEF2AQ02078 507 aaPredicted RBP2.77□□□□□ -1.97
GABPB1-209ENST00000559100 DSC2Q02487 901 aa2.77□□□□□ -1.97
GABPB1-209ENST00000559100 CD69Q07108 199 aa2.77□□□□□ -1.97
GABPB1-209ENST00000559100 PPP3CAQ08209 521 aa2.77□□□□□ -1.97
GABPB1-209ENST00000559100 CACNB2Q08289 660 aaPredicted RBP2.77□□□□□ -1.97
GABPB1-209ENST00000559100 KRT72Q14CN4 511 aa2.77□□□□□ -1.97
GABPB1-209ENST00000559100 SEPT2Q15019 361 aa2.77□□□□□ -1.97
GABPB1-209ENST00000559100 CNGA2Q16280 664 aa2.77□□□□□ -1.97
GABPB1-209ENST00000559100 SLC4A8Q2Y0W8 1093 aa2.77□□□□□ -1.97
GABPB1-209ENST00000559100 KRTAP19-4Q3LI73 84 aa2.77□□□□□ -1.97
GABPB1-209ENST00000559100 CCDC38Q502W7 563 aa2.77□□□□□ -1.97
GABPB1-209ENST00000559100 GJC2Q5T442 439 aaPredicted RBP2.77□□□□□ -1.97
GABPB1-209ENST00000559100 IZUMO3Q5VZ72 239 aa2.77□□□□□ -1.97
GABPB1-209ENST00000559100 PGBD2Q6P3X8 592 aa2.77□□□□□ -1.97
GABPB1-209ENST00000559100 DBX2Q6ZNG2 339 aa2.77□□□□□ -1.97
GABPB1-209ENST00000559100 SYTL1Q8IYJ3 562 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms