RNA–Protein interactions for RNA: ENST00000559037.1

CASC4-207, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 680 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-207ENST00000559037 ZSWIM4Q9H7M6 989 aa6.16□□□□□ -1.42
CASC4-207ENST00000559037 C9orf78Q9NZ63 289 aaPredicted RBP6.16□□□□□ -1.42
CASC4-207ENST00000559037 PTPRCP08575 1304 aa6.16□□□□□ -1.42
CASC4-207ENST00000559037 MYH2Q9UKX2 1941 aa6.15□□□□□ -1.42
CASC4-207ENST00000559037 THSD7BQ9C0I4 1608 aa6.15□□□□□ -1.42
CASC4-207ENST00000559037 SNAP23O00161 211 aa6.15□□□□□ -1.42
CASC4-207ENST00000559037 TAF5LO75529 589 aa6.15□□□□□ -1.42
CASC4-207ENST00000559037 CT47B1P0C2W7 299 aaPredicted RBP6.15□□□□□ -1.42
CASC4-207ENST00000559037 HSPA1AP0DMV8 641 aaKnown RBP6.15□□□□□ -1.42
CASC4-207ENST00000559037 HSPA1BP0DMV9 641 aaKnown RBP6.15□□□□□ -1.42
CASC4-207ENST00000559037 KLRK1P26718 216 aa6.15□□□□□ -1.42
CASC4-207ENST00000559037 GJA4P35212 333 aa6.15□□□□□ -1.42
CASC4-207ENST00000559037 KCNC1P48547 511 aa6.15□□□□□ -1.42
CASC4-207ENST00000559037 SARSP49591 514 aaKnown RBP6.15□□□□□ -1.42
CASC4-207ENST00000559037 MMP14P50281 582 aa6.15□□□□□ -1.42
CASC4-207ENST00000559037 SLURP1P55000 103 aa6.15□□□□□ -1.42
CASC4-207ENST00000559037 GPR19Q15760 415 aa6.15□□□□□ -1.42
CASC4-207ENST00000559037 RABL6Q3YEC7 729 aaPredicted RBP6.15□□□□□ -1.42
CASC4-207ENST00000559037 FIGNQ5HY92 759 aa6.15□□□□□ -1.42
CASC4-207ENST00000559037 FAM26FQ5R3K3 315 aa6.15□□□□□ -1.42
CASC4-207ENST00000559037 TTLL5Q6EMB2 1281 aa6.15□□□□□ -1.42
CASC4-207ENST00000559037 CAPNS2Q96L46 248 aa6.15□□□□□ -1.42
CASC4-207ENST00000559037 MAGEB10Q96LZ2 347 aaPredicted RBP6.15□□□□□ -1.42
CASC4-207ENST00000559037 CLIC6Q96NY7 704 aa6.15□□□□□ -1.42
CASC4-207ENST00000559037 NOX5Q96PH1 765 aa6.15□□□□□ -1.42
CASC4-207ENST00000559037 KCNJ15Q99712 375 aa6.15□□□□□ -1.42
CASC4-207ENST00000559037 CD209Q9NNX6 404 aa6.15□□□□□ -1.42
CASC4-207ENST00000559037 RIPOR2Q9Y4F9 1068 aa6.15□□□□□ -1.42
CASC4-207ENST00000559037 ASTN2O75129 1339 aaPredicted RBP6.15□□□□□ -1.43
CASC4-207ENST00000559037 WDR33Q9C0J8 1336 aaKnown RBP6.15□□□□□ -1.43
CASC4-207ENST00000559037 MYO5AQ9Y4I1 1855 aaKnown RBP6.15□□□□□ -1.43
CASC4-207ENST00000559037 LAMB1P07942 1786 aa6.14□□□□□ -1.43
CASC4-207ENST00000559037 PLD2O14939 933 aa6.14□□□□□ -1.43
CASC4-207ENST00000559037 SLC27A2O14975 620 aa6.14□□□□□ -1.43
CASC4-207ENST00000559037 CELF2O95319 508 aaKnown RBP6.14□□□□□ -1.43
CASC4-207ENST00000559037 LRG1P02750 347 aa6.14□□□□□ -1.43
CASC4-207ENST00000559037 CHGBP05060 677 aa6.14□□□□□ -1.43
CASC4-207ENST00000559037 IL1R1P14778 569 aa6.14□□□□□ -1.43
CASC4-207ENST00000559037 FAHP16930 419 aa6.14□□□□□ -1.43
CASC4-207ENST00000559037 MAP2K2P36507 400 aa6.14□□□□□ -1.43
CASC4-207ENST00000559037 STAT5AP42229 794 aa6.14□□□□□ -1.43
CASC4-207ENST00000559037 TUSC3Q13454 348 aa6.14□□□□□ -1.43
CASC4-207ENST00000559037 CCDC57Q2TAC2 916 aa6.14□□□□□ -1.43
CASC4-207ENST00000559037 LDHAL6AQ6ZMR3 332 aa6.14□□□□□ -1.43
CASC4-207ENST00000559037 KRT26Q7Z3Y9 468 aa6.14□□□□□ -1.43
CASC4-207ENST00000559037 FRMD5Q7Z6J6 570 aa6.14□□□□□ -1.43
CASC4-207ENST00000559037 ZC3H7AQ8IWR0 971 aaKnown RBP6.14□□□□□ -1.43
CASC4-207ENST00000559037 FAM26EQ8N5C1 309 aa6.14□□□□□ -1.43
CASC4-207ENST00000559037 ANKRD44Q8N8A2 993 aa6.14□□□□□ -1.43
CASC4-207ENST00000559037 PCDH19Q8TAB3 1148 aa6.14□□□□□ -1.43
CASC4-207ENST00000559037 DCPSQ96C86 337 aaKnown RBP6.14□□□□□ -1.43
CASC4-207ENST00000559037 SUCLG2Q96I99 432 aa6.14□□□□□ -1.43
CASC4-207ENST00000559037 ZBED3Q96IU2 234 aaPredicted RBP6.14□□□□□ -1.43
CASC4-207ENST00000559037 MXD3Q9BW11 206 aa6.14□□□□□ -1.43
CASC4-207ENST00000559037 NCOA5Q9HCD5 579 aaKnown RBP6.14□□□□□ -1.43
CASC4-207ENST00000559037 SPATA6Q9NWH7 488 aaPredicted RBP6.14□□□□□ -1.43
CASC4-207ENST00000559037 RTEL1Q9NZ71 1219 aa6.14□□□□□ -1.43
CASC4-207ENST00000559037 NDOR1Q9UHB4 597 aa6.14□□□□□ -1.43
CASC4-207ENST00000559037 RCAN3Q9UKA8 241 aa6.14□□□□□ -1.43
CASC4-207ENST00000559037 ABT1Q9ULW3 272 aaKnown RBP6.14□□□□□ -1.43
CASC4-207ENST00000559037 PCDHA8Q9Y5H6 950 aa6.14□□□□□ -1.43
CASC4-207ENST00000559037 KIAA0100Q14667 2235 aaKnown RBP6.14□□□□□ -1.43
CASC4-207ENST00000559037 ARAP2Q8WZ64 1704 aa6.13□□□□□ -1.43
CASC4-207ENST00000559037 DOCK3Q8IZD9 2030 aa6.13□□□□□ -1.43
CASC4-207ENST00000559037 PDE4DIPQ5VU43 2346 aa6.13□□□□□ -1.43
CASC4-207ENST00000559037 FOXN1O15353 648 aa6.13□□□□□ -1.43
CASC4-207ENST00000559037 CRTAMO95727 393 aa6.13□□□□□ -1.43
CASC4-207ENST00000559037 ECE1P42892 770 aa6.13□□□□□ -1.43
CASC4-207ENST00000559037 GJA9P57773 515 aa6.13□□□□□ -1.43
CASC4-207ENST00000559037 UBE4AQ14139 1066 aa6.13□□□□□ -1.43
CASC4-207ENST00000559037 CRY1Q16526 586 aa6.13□□□□□ -1.43
CASC4-207ENST00000559037 CCDC144BQ3MJ40 725 aa6.13□□□□□ -1.43
CASC4-207ENST00000559037 PAN2Q504Q3 1202 aaKnown RBP6.13□□□□□ -1.43
CASC4-207ENST00000559037 FNDC3BQ53EP0 1204 aaKnown RBP6.13□□□□□ -1.43
CASC4-207ENST00000559037 VASNQ6EMK4 673 aa6.13□□□□□ -1.43
CASC4-207ENST00000559037 LILRB2Q8N423 598 aa6.13□□□□□ -1.43
CASC4-207ENST00000559037 CERS5Q8N5B7 392 aa6.13□□□□□ -1.43
CASC4-207ENST00000559037 TDRD7Q8NHU6 1098 aaKnown RBP6.13□□□□□ -1.43
CASC4-207ENST00000559037 FAM84BQ96KN1 310 aaPredicted RBP6.13□□□□□ -1.43
CASC4-207ENST00000559037 CELF4Q9BZC1 486 aaKnown RBP6.13□□□□□ -1.43
CASC4-207ENST00000559037 PUS3Q9BZE2 481 aaKnown RBP6.13□□□□□ -1.43
CASC4-207ENST00000559037 BICC1Q9H694 974 aaKnown RBP6.13□□□□□ -1.43
CASC4-207ENST00000559037 MYOZ2Q9NPC6 264 aa6.13□□□□□ -1.43
CASC4-207ENST00000559037 DLL4Q9NR61 685 aa6.13□□□□□ -1.43
CASC4-207ENST00000559037 CNNM1Q9NRU3 951 aa6.13□□□□□ -1.43
CASC4-207ENST00000559037 CATSPERZQ9NTU4 200 aa6.13□□□□□ -1.43
CASC4-207ENST00000559037 SRPK3Q9UPE1 567 aa6.13□□□□□ -1.43
CASC4-207ENST00000559037 MYO3BQ8WXR4 1341 aa6.13□□□□□ -1.43
CASC4-207ENST00000559037 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.12□□□□□ -1.43
CASC4-207ENST00000559037 B4E1Z4 1266 aa6.12□□□□□ -1.43
CASC4-207ENST00000559037 ADM5C9JUS6 153 aa6.12□□□□□ -1.43
CASC4-207ENST00000559037 WNT10BO00744 389 aa6.12□□□□□ -1.43
CASC4-207ENST00000559037 NKRFO15226 690 aaKnown RBP eCLIP6.12□□□□□ -1.43
CASC4-207ENST00000559037 COL6A2P12110 1019 aa6.12□□□□□ -1.43
CASC4-207ENST00000559037 KCNJ4P48050 445 aa6.12□□□□□ -1.43
CASC4-207ENST00000559037 RFX5P48382 616 aaPredicted RBP6.12□□□□□ -1.43
CASC4-207ENST00000559037 CTCFP49711 727 aaPredicted RBP6.12□□□□□ -1.43
CASC4-207ENST00000559037 RARSP54136 660 aaKnown RBP6.12□□□□□ -1.43
CASC4-207ENST00000559037 RRP1P56182 461 aaKnown RBP6.12□□□□□ -1.43
CASC4-207ENST00000559037 FKBP1AP62942 108 aaKnown RBP6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms