RNA–Protein interactions for RNA: ENST00000557948.1

TRPM1-204, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 2

Gene TRPM1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-204ENST00000557948 DPP7Q9UHL4 492 aa6.65□□□□□ -1.34
TRPM1-204ENST00000557948 NDRG2Q9UN36 371 aaKnown RBP6.65□□□□□ -1.34
TRPM1-204ENST00000557948 PCDHB11Q9Y5F2 797 aa6.65□□□□□ -1.34
TRPM1-204ENST00000557948 PCDHGA5Q9Y5G8 931 aa6.65□□□□□ -1.34
TRPM1-204ENST00000557948 TRPV2Q9Y5S1 764 aa6.65□□□□□ -1.34
TRPM1-204ENST00000557948 ZFP37Q9Y6Q3 630 aaPredicted RBP6.65□□□□□ -1.34
TRPM1-204ENST00000557948 IGSF9BQ9UPX0 1349 aa6.65□□□□□ -1.35
TRPM1-204ENST00000557948 F5P12259 2224 aa6.64□□□□□ -1.35
TRPM1-204ENST00000557948 ASCC3Q8N3C0 2202 aaKnown RBP6.64□□□□□ -1.35
TRPM1-204ENST00000557948 PNMA6EA0A0J9YXQ4 647 aa6.64□□□□□ -1.35
TRPM1-204ENST00000557948 FAM221BA6H8Z2 402 aa6.64□□□□□ -1.35
TRPM1-204ENST00000557948 CAPN8A6NHC0 703 aa6.64□□□□□ -1.35
TRPM1-204ENST00000557948 SHISA7A6NL88 538 aa6.64□□□□□ -1.35
TRPM1-204ENST00000557948 C9IYK1 514 aa6.64□□□□□ -1.35
TRPM1-204ENST00000557948 NT5C1B-RDH14C9J2C7 533 aa6.64□□□□□ -1.35
TRPM1-204ENST00000557948 H0Y626 953 aa6.64□□□□□ -1.35
TRPM1-204ENST00000557948 GOLIM4O00461 696 aa6.64□□□□□ -1.35
TRPM1-204ENST00000557948 CAPN9O14815 690 aa6.64□□□□□ -1.35
TRPM1-204ENST00000557948 ZBTB24O43167 697 aaPredicted RBP6.64□□□□□ -1.35
TRPM1-204ENST00000557948 MGEA5O60502 916 aa6.64□□□□□ -1.35
TRPM1-204ENST00000557948 DKK1O94907 266 aa6.64□□□□□ -1.35
TRPM1-204ENST00000557948 TRIM16O95361 564 aa6.64□□□□□ -1.35
TRPM1-204ENST00000557948 MBD3O95983 291 aa6.64□□□□□ -1.35
TRPM1-204ENST00000557948 IGHDP01880 384 aa6.64□□□□□ -1.35
TRPM1-204ENST00000557948 TGFB3P10600 412 aa6.64□□□□□ -1.35
TRPM1-204ENST00000557948 MYCLP12524 364 aaPredicted RBP6.64□□□□□ -1.35
TRPM1-204ENST00000557948 CBX1P83916 185 aa6.64□□□□□ -1.35
TRPM1-204ENST00000557948 SP2Q02086 613 aa6.64□□□□□ -1.35
TRPM1-204ENST00000557948 PPFIA1Q13136 1202 aa6.64□□□□□ -1.35
TRPM1-204ENST00000557948 SBK1Q52WX2 424 aa6.64□□□□□ -1.35
TRPM1-204ENST00000557948 BTNL9Q6UXG8 535 aa6.64□□□□□ -1.35
TRPM1-204ENST00000557948 MTSS1LQ765P7 747 aa6.64□□□□□ -1.35
TRPM1-204ENST00000557948 CACNA2D4Q7Z3S7 1137 aa6.64□□□□□ -1.35
TRPM1-204ENST00000557948 NEDD1Q8NHV4 660 aa6.64□□□□□ -1.35
TRPM1-204ENST00000557948 SYTL5Q8TDW5 730 aaPredicted RBP6.64□□□□□ -1.35
TRPM1-204ENST00000557948 DCAF4Q8WV16 495 aa6.64□□□□□ -1.35
TRPM1-204ENST00000557948 EAF2Q96CJ1 260 aaPredicted RBP6.64□□□□□ -1.35
TRPM1-204ENST00000557948 CASD1Q96PB1 797 aa6.64□□□□□ -1.35
TRPM1-204ENST00000557948 RHOBTB2Q9BYZ6 727 aa6.64□□□□□ -1.35
TRPM1-204ENST00000557948 MAF1Q9H063 256 aa6.64□□□□□ -1.35
TRPM1-204ENST00000557948 SLC32A1Q9H598 525 aa6.64□□□□□ -1.35
TRPM1-204ENST00000557948 COL20A1Q9P218 1284 aa6.64□□□□□ -1.35
TRPM1-204ENST00000557948 CGNQ9P2M7 1197 aaKnown RBP6.64□□□□□ -1.35
TRPM1-204ENST00000557948 WDR19Q8NEZ3 1342 aa6.64□□□□□ -1.35
TRPM1-204ENST00000557948 PLIN4Q96Q06 1357 aa6.64□□□□□ -1.35
TRPM1-204ENST00000557948 COL12A1Q99715 3063 aa6.64□□□□□ -1.35
TRPM1-204ENST00000557948 MYH6P13533 1939 aa6.64□□□□□ -1.35
TRPM1-204ENST00000557948 MTCL1Q9Y4B5 1905 aaKnown RBP6.64□□□□□ -1.35
TRPM1-204ENST00000557948 PATL2C9JE40 543 aaKnown RBP6.63□□□□□ -1.35
TRPM1-204ENST00000557948 MAN2B1O00754 1011 aa6.63□□□□□ -1.35
TRPM1-204ENST00000557948 SURF6O75683 361 aaKnown RBP6.63□□□□□ -1.35
TRPM1-204ENST00000557948 ADD2P35612 726 aa6.63□□□□□ -1.35
TRPM1-204ENST00000557948 RAP1GAPP47736 663 aa6.63□□□□□ -1.35
TRPM1-204ENST00000557948 BCAR1P56945 870 aa6.63□□□□□ -1.35
TRPM1-204ENST00000557948 SIM1P81133 766 aaPredicted RBP6.63□□□□□ -1.35
TRPM1-204ENST00000557948 TFAP4Q01664 338 aa6.63□□□□□ -1.35
TRPM1-204ENST00000557948 GRIK4Q16099 956 aa6.63□□□□□ -1.35
TRPM1-204ENST00000557948 ZSCAN23Q3MJ62 389 aa6.63□□□□□ -1.35
TRPM1-204ENST00000557948 ODR4Q5SWX8 454 aa6.63□□□□□ -1.35
TRPM1-204ENST00000557948 DDX53Q86TM3 631 aaKnown RBP6.63□□□□□ -1.35
TRPM1-204ENST00000557948 CHCHD4Q8N4Q1 142 aa6.63□□□□□ -1.35
TRPM1-204ENST00000557948 LSM14AQ8ND56 463 aaKnown RBP6.63□□□□□ -1.35
TRPM1-204ENST00000557948 TBC1D5Q92609 795 aa6.63□□□□□ -1.35
TRPM1-204ENST00000557948 CRELD1Q96HD1 420 aa6.63□□□□□ -1.35
TRPM1-204ENST00000557948 DOCK6Q96HP0 2047 aa6.63□□□□□ -1.35
TRPM1-204ENST00000557948 CELF4Q9BZC1 486 aaKnown RBP6.63□□□□□ -1.35
TRPM1-204ENST00000557948 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.63□□□□□ -1.35
TRPM1-204ENST00000557948 ELAC1Q9H777 363 aaKnown RBP6.63□□□□□ -1.35
TRPM1-204ENST00000557948 LMAN1LQ9HAT1 526 aa6.63□□□□□ -1.35
TRPM1-204ENST00000557948 TMEM9BQ9NQ34 198 aa6.63□□□□□ -1.35
TRPM1-204ENST00000557948 PXMP2Q9NR77 195 aa6.63□□□□□ -1.35
TRPM1-204ENST00000557948 HEBP1Q9NRV9 189 aa6.63□□□□□ -1.35
TRPM1-204ENST00000557948 SRPK3Q9UPE1 567 aa6.63□□□□□ -1.35
TRPM1-204ENST00000557948 CACNA1EQ15878 2313 aa6.62□□□□□ -1.35
TRPM1-204ENST00000557948 NUP205Q92621 2012 aa6.62□□□□□ -1.35
TRPM1-204ENST00000557948 MBLAC1A4D2B0 266 aaPredicted RBP6.62□□□□□ -1.35
TRPM1-204ENST00000557948 SFI1A8K8P3 1242 aa6.62□□□□□ -1.35
TRPM1-204ENST00000557948 K7ELQ4 463 aaPredicted RBP6.62□□□□□ -1.35
TRPM1-204ENST00000557948 RPS6KA5O75582 802 aa6.62□□□□□ -1.35
TRPM1-204ENST00000557948 RFPL2O75678 378 aa6.62□□□□□ -1.35
TRPM1-204ENST00000557948 RPP40O75818 363 aaKnown RBP6.62□□□□□ -1.35
TRPM1-204ENST00000557948 BAG4O95429 457 aaKnown RBP6.62□□□□□ -1.35
TRPM1-204ENST00000557948 GNAI2P04899 355 aa6.62□□□□□ -1.35
TRPM1-204ENST00000557948 CNPP09543 421 aaKnown RBP6.62□□□□□ -1.35
TRPM1-204ENST00000557948 CCDC192P0DO97 292 aa6.62□□□□□ -1.35
TRPM1-204ENST00000557948 MYBP10242 640 aa6.62□□□□□ -1.35
TRPM1-204ENST00000557948 HSPD1P10809 573 aaKnown RBP6.62□□□□□ -1.35
TRPM1-204ENST00000557948 FSHRP23945 695 aa6.62□□□□□ -1.35
TRPM1-204ENST00000557948 ATP1A2P50993 1020 aa6.62□□□□□ -1.35
TRPM1-204ENST00000557948 IGBP1P78318 339 aa6.62□□□□□ -1.35
TRPM1-204ENST00000557948 NOLC1Q14978 699 aaKnown RBP eCLIP6.62□□□□□ -1.35
TRPM1-204ENST00000557948 UAP1L1Q3KQV9 507 aa6.62□□□□□ -1.35
TRPM1-204ENST00000557948 RNF20Q5VTR2 975 aa6.62□□□□□ -1.35
TRPM1-204ENST00000557948 PPP1R18Q6NYC8 613 aa6.62□□□□□ -1.35
TRPM1-204ENST00000557948 KBTBD6Q86V97 674 aa6.62□□□□□ -1.35
TRPM1-204ENST00000557948 MCF2L2Q86YR7 1114 aa6.62□□□□□ -1.35
TRPM1-204ENST00000557948 SPEM1Q8N4L4 309 aa6.62□□□□□ -1.35
TRPM1-204ENST00000557948 CEP120Q8N960 986 aa6.62□□□□□ -1.35
TRPM1-204ENST00000557948 MDM1Q8TC05 714 aa6.62□□□□□ -1.35
TRPM1-204ENST00000557948 SYAP1Q96A49 352 aaPredicted RBP6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms