RNA–Protein interactions for RNA: ENST00000557517.1

PSMC6-215, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

TSL 3

Gene PSMC6, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-215ENST00000557517 IPPQ9Y573 584 aa11.74□□□□□ -0.53
PSMC6-215ENST00000557517 HCFC2Q9Y5Z7 792 aa11.74□□□□□ -0.53
PSMC6-215ENST00000557517 ARL5CA6NH57 179 aa11.73□□□□□ -0.53
PSMC6-215ENST00000557517 NRP1O14786 923 aa11.73□□□□□ -0.53
PSMC6-215ENST00000557517 CLASP2O75122 1294 aaKnown RBP11.73□□□□□ -0.53
PSMC6-215ENST00000557517 POMCP01189 267 aa11.73□□□□□ -0.53
PSMC6-215ENST00000557517 SRGAP2BP0DMP2 458 aa11.73□□□□□ -0.53
PSMC6-215ENST00000557517 ITGA4P13612 1032 aa11.73□□□□□ -0.53
PSMC6-215ENST00000557517 RNASELQ05823 741 aaKnown RBP11.73□□□□□ -0.53
PSMC6-215ENST00000557517 DSC1Q08554 894 aa11.73□□□□□ -0.53
PSMC6-215ENST00000557517 ECM1Q16610 540 aa11.73□□□□□ -0.53
PSMC6-215ENST00000557517 FAM187BQ17R55 369 aa11.73□□□□□ -0.53
PSMC6-215ENST00000557517 CDCA2Q69YH5 1023 aaPredicted RBP11.73□□□□□ -0.53
PSMC6-215ENST00000557517 ADGRD1Q6QNK2 874 aa11.73□□□□□ -0.53
PSMC6-215ENST00000557517 PADI6Q6TGC4 694 aa11.73□□□□□ -0.53
PSMC6-215ENST00000557517 BMP8AQ7Z5Y6 402 aa11.73□□□□□ -0.53
PSMC6-215ENST00000557517 COLGALT2Q8IYK4 626 aa11.73□□□□□ -0.53
PSMC6-215ENST00000557517 PRSS33Q8NF86 280 aa11.73□□□□□ -0.53
PSMC6-215ENST00000557517 URGCPQ8TCY9 931 aa11.73□□□□□ -0.53
PSMC6-215ENST00000557517 CASP10Q92851 521 aa11.73□□□□□ -0.53
PSMC6-215ENST00000557517 PRIMPOLQ96LW4 560 aa11.73□□□□□ -0.53
PSMC6-215ENST00000557517 VN1R3Q9BXE9 311 aa11.73□□□□□ -0.53
PSMC6-215ENST00000557517 POLR3FQ9H1D9 316 aaPredicted RBP11.73□□□□□ -0.53
PSMC6-215ENST00000557517 ADAM7Q9H2U9 754 aa11.73□□□□□ -0.53
PSMC6-215ENST00000557517 GPRC5CQ9NQ84 441 aa11.73□□□□□ -0.53
PSMC6-215ENST00000557517 MIOSQ9NXC5 875 aa11.73□□□□□ -0.53
PSMC6-215ENST00000557517 NOL7Q9UMY1 257 aaKnown RBP11.73□□□□□ -0.53
PSMC6-215ENST00000557517 FAN1Q9Y2M0 1017 aa11.73□□□□□ -0.53
PSMC6-215ENST00000557517 GIT1Q9Y2X7 761 aa11.73□□□□□ -0.53
PSMC6-215ENST00000557517 C5orf42Q9H799 3197 aa11.73□□□□□ -0.53
PSMC6-215ENST00000557517 LAD1O00515 517 aa11.72□□□□□ -0.53
PSMC6-215ENST00000557517 B4GALT5O43286 388 aa11.72□□□□□ -0.53
PSMC6-215ENST00000557517 USO1O60763 962 aaKnown RBP11.72□□□□□ -0.53
PSMC6-215ENST00000557517 FOXK1P85037 733 aa11.72□□□□□ -0.53
PSMC6-215ENST00000557517 ITIH3Q06033 890 aa11.72□□□□□ -0.53
PSMC6-215ENST00000557517 PTGDRQ13258 359 aa11.72□□□□□ -0.53
PSMC6-215ENST00000557517 SLC27A1Q6PCB7 646 aa11.72□□□□□ -0.53
PSMC6-215ENST00000557517 MAEAQ7L5Y9 396 aa11.72□□□□□ -0.53
PSMC6-215ENST00000557517 PLPP6Q8IY26 295 aa11.72□□□□□ -0.53
PSMC6-215ENST00000557517 RNF168Q8IYW5 571 aaPredicted RBP11.72□□□□□ -0.53
PSMC6-215ENST00000557517 SLC22A17Q8WUG5 538 aa11.72□□□□□ -0.53
PSMC6-215ENST00000557517 CPB2Q96IY4 423 aa11.72□□□□□ -0.53
PSMC6-215ENST00000557517 TMX3Q96JJ7 454 aa11.72□□□□□ -0.53
PSMC6-215ENST00000557517 CCDC43Q96MW1 224 aaKnown RBP11.72□□□□□ -0.53
PSMC6-215ENST00000557517 GAD1Q99259 594 aa11.72□□□□□ -0.53
PSMC6-215ENST00000557517 LRWD1Q9UFC0 647 aa11.72□□□□□ -0.53
PSMC6-215ENST00000557517 MUTYHQ9UIF7 546 aa11.72□□□□□ -0.53
PSMC6-215ENST00000557517 HES2Q9Y543 173 aa11.72□□□□□ -0.53
PSMC6-215ENST00000557517 PCDHB6Q9Y5E3 794 aa11.72□□□□□ -0.53
PSMC6-215ENST00000557517 GVINP1Q7Z2Y8 2422 aa11.72□□□□□ -0.53
PSMC6-215ENST00000557517 KMT2EQ8IZD2 1858 aa11.72□□□□□ -0.53
PSMC6-215ENST00000557517 PRPHP41219 470 aa11.71□□□□□ -0.53
PSMC6-215ENST00000557517 PTPN5P54829 565 aa11.71□□□□□ -0.53
PSMC6-215ENST00000557517 GNL2Q13823 731 aaKnown RBP11.71□□□□□ -0.53
PSMC6-215ENST00000557517 NBR1Q14596 966 aa11.71□□□□□ -0.53
PSMC6-215ENST00000557517 PTPN14Q15678 1187 aa11.71□□□□□ -0.53
PSMC6-215ENST00000557517 IL17AQ16552 155 aa11.71□□□□□ -0.53
PSMC6-215ENST00000557517 TPRNQ4KMQ1 711 aa11.71□□□□□ -0.53
PSMC6-215ENST00000557517 HAUS3Q68CZ6 603 aa11.71□□□□□ -0.53
PSMC6-215ENST00000557517 KCTD17Q8N5Z5 321 aa11.71□□□□□ -0.53
PSMC6-215ENST00000557517 EDAQ92838 391 aa11.71□□□□□ -0.53
PSMC6-215ENST00000557517 ZFP42Q96MM3 310 aa11.71□□□□□ -0.53
PSMC6-215ENST00000557517 FAM193BQ96PV7 902 aaPredicted RBP11.71□□□□□ -0.53
PSMC6-215ENST00000557517 GBP3Q9H0R5 595 aa11.71□□□□□ -0.53
PSMC6-215ENST00000557517 C2orf40Q9H1Z8 148 aa11.71□□□□□ -0.53
PSMC6-215ENST00000557517 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.71□□□□□ -0.53
PSMC6-215ENST00000557517 CHST7Q9NS84 486 aa11.71□□□□□ -0.53
PSMC6-215ENST00000557517 PRMT7Q9NVM4 692 aaPredicted RBP11.71□□□□□ -0.53
PSMC6-215ENST00000557517 KIAA1024Q9UPX6 916 aa11.71□□□□□ -0.53
PSMC6-215ENST00000557517 KIF3AQ9Y496 699 aa11.71□□□□□ -0.53
PSMC6-215ENST00000557517 ARHGEF35A5YM69 484 aa11.7□□□□□ -0.54
PSMC6-215ENST00000557517 LRRIQ4A6NIV6 560 aa11.7□□□□□ -0.54
PSMC6-215ENST00000557517 ACKR2O00590 384 aa11.7□□□□□ -0.54
PSMC6-215ENST00000557517 CD2BP2O95400 341 aaKnown RBP11.7□□□□□ -0.54
PSMC6-215ENST00000557517 C1RP00736 705 aa11.7□□□□□ -0.54
PSMC6-215ENST00000557517 SOD2P04179 222 aa11.7□□□□□ -0.54
PSMC6-215ENST00000557517 CNPP09543 421 aaKnown RBP11.7□□□□□ -0.54
PSMC6-215ENST00000557517 CCT6AP40227 531 aaKnown RBP11.7□□□□□ -0.54
PSMC6-215ENST00000557517 MLH1P40692 756 aa11.7□□□□□ -0.54
PSMC6-215ENST00000557517 NAMPTP43490 491 aa11.7□□□□□ -0.54
PSMC6-215ENST00000557517 MCM2P49736 904 aa11.7□□□□□ -0.54
PSMC6-215ENST00000557517 RILPL1Q5EBL4 403 aa11.7□□□□□ -0.54
PSMC6-215ENST00000557517 KIAA0319Q5VV43 1072 aa11.7□□□□□ -0.54
PSMC6-215ENST00000557517 LLGL2Q6P1M3 1020 aa11.7□□□□□ -0.54
PSMC6-215ENST00000557517 TAS1R1Q7RTX1 841 aa11.7□□□□□ -0.54
PSMC6-215ENST00000557517 PPFIBP1Q86W92 1011 aa11.7□□□□□ -0.54
PSMC6-215ENST00000557517 GPR65Q8IYL9 337 aa11.7□□□□□ -0.54
PSMC6-215ENST00000557517 HACE1Q8IYU2 909 aa11.7□□□□□ -0.54
PSMC6-215ENST00000557517 HS6ST3Q8IZP7 471 aa11.7□□□□□ -0.54
PSMC6-215ENST00000557517 AUTS2Q8WXX7 1259 aa11.7□□□□□ -0.54
PSMC6-215ENST00000557517 BSNDQ8WZ55 320 aa11.7□□□□□ -0.54
PSMC6-215ENST00000557517 RPGRIP1Q96KN7 1286 aa11.7□□□□□ -0.54
PSMC6-215ENST00000557517 KLHL5Q96PQ7 755 aa11.7□□□□□ -0.54
PSMC6-215ENST00000557517 NTPCRQ9BSD7 190 aaKnown RBP11.7□□□□□ -0.54
PSMC6-215ENST00000557517 RAB34Q9BZG1 259 aa11.7□□□□□ -0.54
PSMC6-215ENST00000557517 TRIM6Q9C030 488 aaPredicted RBP11.7□□□□□ -0.54
PSMC6-215ENST00000557517 CCDC113Q9H0I3 377 aa11.7□□□□□ -0.54
PSMC6-215ENST00000557517 BHMT2Q9H2M3 363 aa11.7□□□□□ -0.54
PSMC6-215ENST00000557517 NXF3Q9H4D5 531 aaKnown RBP11.7□□□□□ -0.54
PSMC6-215ENST00000557517 MARCH5Q9NX47 278 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms