RNA–Protein interactions for RNA: ENST00000557511.5

PSEN1-223, Transcript of presenilin 1, humanhuman

TSL 5 BASIC

Gene PSEN1, Length 1,230 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-223ENST00000557511 THNSL1Q8IYQ7 743 aa9.17□□□□□ -0.94
PSEN1-223ENST00000557511 SLC17A8Q8NDX2 589 aa9.17□□□□□ -0.94
PSEN1-223ENST00000557511 PPM1EQ8WY54 764 aa9.17□□□□□ -0.94
PSEN1-223ENST00000557511 CPB2Q96IY4 423 aa9.17□□□□□ -0.94
PSEN1-223ENST00000557511 EPSTI1Q96J88 318 aa9.17□□□□□ -0.94
PSEN1-223ENST00000557511 SPATA32Q96LK8 384 aa9.17□□□□□ -0.94
PSEN1-223ENST00000557511 CLIC6Q96NY7 704 aa9.17□□□□□ -0.94
PSEN1-223ENST00000557511 C17orf80Q9BSJ5 609 aa9.17□□□□□ -0.94
PSEN1-223ENST00000557511 TCHPQ9BT92 498 aa9.17□□□□□ -0.94
PSEN1-223ENST00000557511 RUSC1Q9BVN2 902 aa9.17□□□□□ -0.94
PSEN1-223ENST00000557511 TMUB1Q9BVT8 246 aa9.17□□□□□ -0.94
PSEN1-223ENST00000557511 LMAN2LQ9H0V9 348 aa9.17□□□□□ -0.94
PSEN1-223ENST00000557511 MINDY3Q9H8M7 445 aa9.17□□□□□ -0.94
PSEN1-223ENST00000557511 KANSL3Q9P2N6 904 aa9.17□□□□□ -0.94
PSEN1-223ENST00000557511 PCDHB2Q9Y5E7 798 aa9.17□□□□□ -0.94
PSEN1-223ENST00000557511 EVPLQ92817 2033 aa9.16□□□□□ -0.94
PSEN1-223ENST00000557511 RANBP2P49792 3224 aaKnown RBP9.16□□□□□ -0.94
PSEN1-223ENST00000557511 H3BNC9 293 aa9.16□□□□□ -0.94
PSEN1-223ENST00000557511 ACKR2O00590 384 aa9.16□□□□□ -0.94
PSEN1-223ENST00000557511 BRD1O95696 1058 aa9.16□□□□□ -0.94
PSEN1-223ENST00000557511 ARF4P18085 180 aaPredicted RBP9.16□□□□□ -0.94
PSEN1-223ENST00000557511 GGCXP38435 758 aa9.16□□□□□ -0.94
PSEN1-223ENST00000557511 MATR3P43243 847 aaKnown RBP eCLIP9.16□□□□□ -0.94
PSEN1-223ENST00000557511 NPTX2P47972 431 aa9.16□□□□□ -0.94
PSEN1-223ENST00000557511 ALDH7A1P49419 539 aaKnown RBP9.16□□□□□ -0.94
PSEN1-223ENST00000557511 SLC12A3P55017 1021 aa9.16□□□□□ -0.94
PSEN1-223ENST00000557511 KRT17Q04695 432 aa9.16□□□□□ -0.94
PSEN1-223ENST00000557511 DNM1Q05193 864 aaKnown RBP9.16□□□□□ -0.94
PSEN1-223ENST00000557511 GRIN1Q05586 938 aa9.16□□□□□ -0.94
PSEN1-223ENST00000557511 MCM6Q14566 821 aa9.16□□□□□ -0.94
PSEN1-223ENST00000557511 FAM187BQ17R55 369 aa9.16□□□□□ -0.94
PSEN1-223ENST00000557511 DCAF4L1Q3SXM0 396 aa9.16□□□□□ -0.94
PSEN1-223ENST00000557511 LONRF3Q496Y0 759 aa9.16□□□□□ -0.94
PSEN1-223ENST00000557511 TIGD5Q53EQ6 642 aa9.16□□□□□ -0.94
PSEN1-223ENST00000557511 NOMO2Q5JPE7 1267 aa9.16□□□□□ -0.94
PSEN1-223ENST00000557511 KCNK18Q7Z418 384 aa9.16□□□□□ -0.94
PSEN1-223ENST00000557511 MYCT1Q8N699 235 aa9.16□□□□□ -0.94
PSEN1-223ENST00000557511 IQUBQ8NA54 791 aa9.16□□□□□ -0.94
PSEN1-223ENST00000557511 TMEM87AQ8NBN3 555 aa9.16□□□□□ -0.94
PSEN1-223ENST00000557511 HELQQ8TDG4 1101 aa9.16□□□□□ -0.94
PSEN1-223ENST00000557511 GDPD5Q8WTR4 605 aa9.16□□□□□ -0.94
PSEN1-223ENST00000557511 BICD1Q96G01 975 aa9.16□□□□□ -0.94
PSEN1-223ENST00000557511 CCDC34Q96HJ3 373 aa9.16□□□□□ -0.94
PSEN1-223ENST00000557511 ZNF558Q96NG5 402 aa9.16□□□□□ -0.94
PSEN1-223ENST00000557511 RPS6KC1Q96S38 1066 aa9.16□□□□□ -0.94
PSEN1-223ENST00000557511 APOL6Q9BWW8 343 aa9.16□□□□□ -0.94
PSEN1-223ENST00000557511 MRPL4Q9BYD3 311 aaKnown RBP9.16□□□□□ -0.94
PSEN1-223ENST00000557511 SCAND2PQ9GZW5 306 aaPredicted RBP9.16□□□□□ -0.94
PSEN1-223ENST00000557511 FZD8Q9H461 694 aa9.16□□□□□ -0.94
PSEN1-223ENST00000557511 CUEDC2Q9H467 287 aa9.16□□□□□ -0.94
PSEN1-223ENST00000557511 RSAD1Q9HA92 442 aa9.16□□□□□ -0.94
PSEN1-223ENST00000557511 PARVGQ9HBI0 331 aa9.16□□□□□ -0.94
PSEN1-223ENST00000557511 TYW1Q9NV66 732 aaKnown RBP9.16□□□□□ -0.94
PSEN1-223ENST00000557511 PARP2Q9UGN5 583 aa9.16□□□□□ -0.94
PSEN1-223ENST00000557511 INPP5FQ9Y2H2 1132 aa9.16□□□□□ -0.94
PSEN1-223ENST00000557511 MRPL42Q9Y6G3 142 aaKnown RBP9.16□□□□□ -0.94
PSEN1-223ENST00000557511 MICAL3Q7RTP6 2002 aa9.15□□□□□ -0.94
PSEN1-223ENST00000557511 GOLGA6L4A6NEF3 574 aa9.15□□□□□ -0.94
PSEN1-223ENST00000557511 SFI1A8K8P3 1242 aa9.15□□□□□ -0.94
PSEN1-223ENST00000557511 RFXAPO00287 272 aa9.15□□□□□ -0.94
PSEN1-223ENST00000557511 SLC16A4O15374 487 aa9.15□□□□□ -0.94
PSEN1-223ENST00000557511 NPTXRO95502 500 aa9.15□□□□□ -0.94
PSEN1-223ENST00000557511 HOXA11P31270 313 aaPredicted RBP9.15□□□□□ -0.94
PSEN1-223ENST00000557511 YARSP54577 528 aaKnown RBP9.15□□□□□ -0.94
PSEN1-223ENST00000557511 CCDC85BQ15834 202 aaPredicted RBP9.15□□□□□ -0.94
PSEN1-223ENST00000557511 ATF7IP2Q5U623 682 aa9.15□□□□□ -0.94
PSEN1-223ENST00000557511 PARP9Q8IXQ6 854 aa9.15□□□□□ -0.94
PSEN1-223ENST00000557511 CEP57L1Q8IYX8 460 aa9.15□□□□□ -0.94
PSEN1-223ENST00000557511 PDILTQ8N807 584 aa9.15□□□□□ -0.94
PSEN1-223ENST00000557511 MICAL1Q8TDZ2 1067 aa9.15□□□□□ -0.94
PSEN1-223ENST00000557511 SPIRE2Q8WWL2 714 aa9.15□□□□□ -0.94
PSEN1-223ENST00000557511 BSNDQ8WZ55 320 aa9.15□□□□□ -0.94
PSEN1-223ENST00000557511 CLP1Q92989 425 aaKnown RBP9.15□□□□□ -0.94
PSEN1-223ENST00000557511 P2RX5Q93086 422 aa9.15□□□□□ -0.94
PSEN1-223ENST00000557511 MRPL38Q96DV4 380 aaKnown RBP9.15□□□□□ -0.94
PSEN1-223ENST00000557511 CASD1Q96PB1 797 aa9.15□□□□□ -0.94
PSEN1-223ENST00000557511 PANK2Q9BZ23 570 aa9.15□□□□□ -0.94
PSEN1-223ENST00000557511 GBP3Q9H0R5 595 aa9.15□□□□□ -0.94
PSEN1-223ENST00000557511 POLD4Q9HCU8 107 aa9.15□□□□□ -0.94
PSEN1-223ENST00000557511 STK39Q9UEW8 545 aa9.15□□□□□ -0.94
PSEN1-223ENST00000557511 GIT1Q9Y2X7 761 aa9.15□□□□□ -0.94
PSEN1-223ENST00000557511 IPPQ9Y573 584 aa9.15□□□□□ -0.94
PSEN1-223ENST00000557511 WDR81Q562E7 1941 aa9.14□□□□□ -0.95
PSEN1-223ENST00000557511 A0A1B0GUA9 196 aa9.14□□□□□ -0.95
PSEN1-223ENST00000557511 C5orf67F2Z3F1 127 aa9.14□□□□□ -0.95
PSEN1-223ENST00000557511 K7ENM7 598 aa9.14□□□□□ -0.95
PSEN1-223ENST00000557511 B4GALT5O43286 388 aa9.14□□□□□ -0.95
PSEN1-223ENST00000557511 TRAK2O60296 914 aa9.14□□□□□ -0.95
PSEN1-223ENST00000557511 ZC3H11AO75152 810 aaKnown RBP eCLIP9.14□□□□□ -0.95
PSEN1-223ENST00000557511 ARHGEF15O94989 841 aa9.14□□□□□ -0.95
PSEN1-223ENST00000557511 IDEP14735 1019 aa9.14□□□□□ -0.95
PSEN1-223ENST00000557511 GAP43P17677 238 aa9.14□□□□□ -0.95
PSEN1-223ENST00000557511 CA8P35219 290 aa9.14□□□□□ -0.95
PSEN1-223ENST00000557511 GATMP50440 423 aa9.14□□□□□ -0.95
PSEN1-223ENST00000557511 USP46P62068 366 aa9.14□□□□□ -0.95
PSEN1-223ENST00000557511 UBE3AQ05086 875 aa9.14□□□□□ -0.95
PSEN1-223ENST00000557511 PKP1Q13835 747 aa9.14□□□□□ -0.95
PSEN1-223ENST00000557511 ADGRE1Q14246 886 aa9.14□□□□□ -0.95
PSEN1-223ENST00000557511 ZNF568Q3ZCX4 644 aa9.14□□□□□ -0.95
PSEN1-223ENST00000557511 TPRNQ4KMQ1 711 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms