RNA–Protein interactions for RNA: ENST00000556671.5

ATXN3-243, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 921 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-243ENST00000556671 PSMD14O00487 310 aa5.73□□□□□ -1.49
ATXN3-243ENST00000556671 SLC27A2O14975 620 aa5.73□□□□□ -1.49
ATXN3-243ENST00000556671 LAMTOR5O43504 91 aa5.73□□□□□ -1.49
ATXN3-243ENST00000556671 IGSF3O75054 1194 aa5.73□□□□□ -1.49
ATXN3-243ENST00000556671 TOMM70O94826 608 aa5.73□□□□□ -1.49
ATXN3-243ENST00000556671 GRK2P25098 689 aa5.73□□□□□ -1.49
ATXN3-243ENST00000556671 EPHX2P34913 555 aa5.73□□□□□ -1.49
ATXN3-243ENST00000556671 GRK3P35626 688 aa5.73□□□□□ -1.49
ATXN3-243ENST00000556671 EPS15P42566 896 aa5.73□□□□□ -1.49
ATXN3-243ENST00000556671 GYG1P46976 350 aa5.73□□□□□ -1.49
ATXN3-243ENST00000556671 GMPSP49915 693 aaPredicted RBP5.73□□□□□ -1.49
ATXN3-243ENST00000556671 RBM5P52756 815 aaKnown RBP eCLIP5.73□□□□□ -1.49
ATXN3-243ENST00000556671 NTRK3Q16288 839 aa5.73□□□□□ -1.49
ATXN3-243ENST00000556671 GORABQ5T7V8 394 aa5.73□□□□□ -1.49
ATXN3-243ENST00000556671 TTLL5Q6EMB2 1281 aa5.73□□□□□ -1.49
ATXN3-243ENST00000556671 TMC5Q6UXY8 1006 aa5.73□□□□□ -1.49
ATXN3-243ENST00000556671 LBX2Q6XYB7 198 aa5.73□□□□□ -1.49
ATXN3-243ENST00000556671 OTOP3Q7RTS5 596 aa5.73□□□□□ -1.49
ATXN3-243ENST00000556671 ZNF804AQ7Z570 1209 aa5.73□□□□□ -1.49
ATXN3-243ENST00000556671 ANKRD44Q8N8A2 993 aa5.73□□□□□ -1.49
ATXN3-243ENST00000556671 ST13P5Q8NFI4 369 aaPredicted RBP5.73□□□□□ -1.49
ATXN3-243ENST00000556671 CLEC4DQ8WXI8 215 aa5.73□□□□□ -1.49
ATXN3-243ENST00000556671 C8orf49Q96NF6 230 aa5.73□□□□□ -1.49
ATXN3-243ENST00000556671 ZFYVE21Q9BQ24 234 aa5.73□□□□□ -1.49
ATXN3-243ENST00000556671 MXD3Q9BW11 206 aa5.73□□□□□ -1.49
ATXN3-243ENST00000556671 RTFDC1Q9BY42 306 aaPredicted RBP5.73□□□□□ -1.49
ATXN3-243ENST00000556671 RBPJLQ9UBG7 517 aa5.73□□□□□ -1.49
ATXN3-243ENST00000556671 ECM29Q5VYK3 1845 aa5.73□□□□□ -1.49
ATXN3-243ENST00000556671 UTYO14607 1347 aa5.73□□□□□ -1.49
ATXN3-243ENST00000556671 MROH5Q6ZUA9 1318 aa5.73□□□□□ -1.49
ATXN3-243ENST00000556671 RTL9Q8NET4 1388 aa5.72□□□□□ -1.49
ATXN3-243ENST00000556671 SHTN1A0MZ66 631 aa5.72□□□□□ -1.49
ATXN3-243ENST00000556671 YDJCA8MPS7 323 aa5.72□□□□□ -1.49
ATXN3-243ENST00000556671 C1QTNF3-AMACRE9PGA6 284 aa5.72□□□□□ -1.49
ATXN3-243ENST00000556671 EYA2O00167 538 aa5.72□□□□□ -1.49
ATXN3-243ENST00000556671 PRODHO43272 600 aa5.72□□□□□ -1.49
ATXN3-243ENST00000556671 SURF6O75683 361 aaKnown RBP5.72□□□□□ -1.49
ATXN3-243ENST00000556671 IFIT1P09914 478 aaKnown RBP5.72□□□□□ -1.49
ATXN3-243ENST00000556671 PABPC1P11940 636 aaKnown RBP5.72□□□□□ -1.49
ATXN3-243ENST00000556671 COL6A1P12109 1028 aa5.72□□□□□ -1.49
ATXN3-243ENST00000556671 ZNF20P17024 532 aa5.72□□□□□ -1.49
ATXN3-243ENST00000556671 KLRK1P26718 216 aa5.72□□□□□ -1.49
ATXN3-243ENST00000556671 HIBADHP31937 336 aaKnown RBP5.72□□□□□ -1.49
ATXN3-243ENST00000556671 ATP8B2P98198 1209 aa5.72□□□□□ -1.49
ATXN3-243ENST00000556671 CHAF1AQ13111 956 aaPredicted RBP5.72□□□□□ -1.49
ATXN3-243ENST00000556671 KIZQ2M2Z5 673 aa5.72□□□□□ -1.49
ATXN3-243ENST00000556671 CAVIN4Q5BKX8 364 aa5.72□□□□□ -1.49
ATXN3-243ENST00000556671 HABP4Q5JVS0 413 aaKnown RBP5.72□□□□□ -1.49
ATXN3-243ENST00000556671 KCNT2Q6UVM3 1135 aa5.72□□□□□ -1.49
ATXN3-243ENST00000556671 GLB1LQ6UWU2 654 aa5.72□□□□□ -1.49
ATXN3-243ENST00000556671 LIMS2Q7Z4I7 341 aa5.72□□□□□ -1.49
ATXN3-243ENST00000556671 SMC1BQ8NDV3 1235 aa5.72□□□□□ -1.49
ATXN3-243ENST00000556671 UHMK1Q8TAS1 419 aaKnown RBP5.72□□□□□ -1.49
ATXN3-243ENST00000556671 OSBP2Q969R2 916 aa5.72□□□□□ -1.49
ATXN3-243ENST00000556671 PPP4R1LQ9P1A2 415 aa5.72□□□□□ -1.49
ATXN3-243ENST00000556671 FTSJ1Q9UET6 329 aa5.72□□□□□ -1.49
ATXN3-243ENST00000556671 RIPOR2Q9Y4F9 1068 aa5.72□□□□□ -1.49
ATXN3-243ENST00000556671 COL4A5P29400 1685 aa5.72□□□□□ -1.49
ATXN3-243ENST00000556671 LTBP1Q14766 1721 aa5.71□□□□□ -1.49
ATXN3-243ENST00000556671 PDE8BO95263 885 aa5.71□□□□□ -1.5
ATXN3-243ENST00000556671 SLC5A1P13866 664 aa5.71□□□□□ -1.5
ATXN3-243ENST00000556671 TIMM10P62072 90 aa5.71□□□□□ -1.5
ATXN3-243ENST00000556671 GRIN1Q05586 938 aa5.71□□□□□ -1.5
ATXN3-243ENST00000556671 TFCP2Q12800 502 aa5.71□□□□□ -1.5
ATXN3-243ENST00000556671 RAB33AQ14088 237 aa5.71□□□□□ -1.5
ATXN3-243ENST00000556671 UBE4AQ14139 1066 aa5.71□□□□□ -1.5
ATXN3-243ENST00000556671 C20orf194Q5TEA3 1177 aa5.71□□□□□ -1.5
ATXN3-243ENST00000556671 VASNQ6EMK4 673 aa5.71□□□□□ -1.5
ATXN3-243ENST00000556671 TRMT10BQ6PF06 316 aaKnown RBP5.71□□□□□ -1.5
ATXN3-243ENST00000556671 NSMFQ6X4W1 530 aa5.71□□□□□ -1.5
ATXN3-243ENST00000556671 PNMA8AQ86V59 439 aaPredicted RBP5.71□□□□□ -1.5
ATXN3-243ENST00000556671 KLHL36Q8N4N3 616 aa5.71□□□□□ -1.5
ATXN3-243ENST00000556671 DTX3Q8N9I9 347 aa5.71□□□□□ -1.5
ATXN3-243ENST00000556671 COA1Q9GZY4 146 aa5.71□□□□□ -1.5
ATXN3-243ENST00000556671 CHMP4BQ9H444 224 aaKnown RBP5.71□□□□□ -1.5
ATXN3-243ENST00000556671 TAF1DQ9H5J8 278 aaPredicted RBP5.71□□□□□ -1.5
ATXN3-243ENST00000556671 CD209Q9NNX6 404 aa5.71□□□□□ -1.5
ATXN3-243ENST00000556671 DLL4Q9NR61 685 aa5.71□□□□□ -1.5
ATXN3-243ENST00000556671 GPRC5DQ9NZD1 345 aa5.71□□□□□ -1.5
ATXN3-243ENST00000556671 DDX19BQ9UMR2 479 aa5.71□□□□□ -1.5
ATXN3-243ENST00000556671 AKAP11Q9UKA4 1901 aa5.71□□□□□ -1.5
ATXN3-243ENST00000556671 DUOX1Q9NRD9 1551 aa5.71□□□□□ -1.5
ATXN3-243ENST00000556671 CDK5RAP2Q96SN8 1893 aa5.71□□□□□ -1.5
ATXN3-243ENST00000556671 TRAV20A0A0B4J274 112 aa5.7□□□□□ -1.5
ATXN3-243ENST00000556671 PNMA6EA0A0J9YXQ4 647 aa5.7□□□□□ -1.5
ATXN3-243ENST00000556671 VIL1P09327 827 aaKnown RBP5.7□□□□□ -1.5
ATXN3-243ENST00000556671 GNAT1P11488 350 aa5.7□□□□□ -1.5
ATXN3-243ENST00000556671 FAHP16930 419 aa5.7□□□□□ -1.5
ATXN3-243ENST00000556671 TNFRSF1AP19438 455 aa5.7□□□□□ -1.5
ATXN3-243ENST00000556671 IL15P40933 162 aaPredicted RBP5.7□□□□□ -1.5
ATXN3-243ENST00000556671 RFX5P48382 616 aaPredicted RBP5.7□□□□□ -1.5
ATXN3-243ENST00000556671 EPHB4P54760 987 aa5.7□□□□□ -1.5
ATXN3-243ENST00000556671 GPR85P60893 370 aa5.7□□□□□ -1.5
ATXN3-243ENST00000556671 IRX6P78412 446 aaPredicted RBP5.7□□□□□ -1.5
ATXN3-243ENST00000556671 SPIRE1Q08AE8 756 aa5.7□□□□□ -1.5
ATXN3-243ENST00000556671 NFATC3Q12968 1075 aa5.7□□□□□ -1.5
ATXN3-243ENST00000556671 GRM1Q13255 1194 aa5.7□□□□□ -1.5
ATXN3-243ENST00000556671 TUSC3Q13454 348 aa5.7□□□□□ -1.5
ATXN3-243ENST00000556671 MVPQ14764 893 aaKnown RBP5.7□□□□□ -1.5
ATXN3-243ENST00000556671 ATP2B3Q16720 1220 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms