RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 SKOR2Q2VWA4 1001 aaPredicted RBP6.07□□□□□ -1.44
SRP54-211ENST00000556445 TRIM61Q5EBN2 209 aa6.07□□□□□ -1.44
SRP54-211ENST00000556445 CT47A1Q5JQC4 288 aaPredicted RBP6.07□□□□□ -1.44
SRP54-211ENST00000556445 L1TD1Q5T7N2 865 aaKnown RBP6.07□□□□□ -1.44
SRP54-211ENST00000556445 MCTP2Q6DN12 878 aa6.07□□□□□ -1.44
SRP54-211ENST00000556445 RPAP2Q8IXW5 612 aaPredicted RBP6.07□□□□□ -1.44
SRP54-211ENST00000556445 ZSWIM2Q8NEG5 633 aa6.07□□□□□ -1.44
SRP54-211ENST00000556445 SLC7A14Q8TBB6 771 aa6.07□□□□□ -1.44
SRP54-211ENST00000556445 DDX1Q92499 740 aaKnown RBP6.07□□□□□ -1.44
SRP54-211ENST00000556445 UPF2Q9HAU5 1272 aaKnown RBP6.07□□□□□ -1.44
SRP54-211ENST00000556445 AS3MTQ9HBK9 375 aa6.07□□□□□ -1.44
SRP54-211ENST00000556445 CROTQ9UKG9 612 aa6.07□□□□□ -1.44
SRP54-211ENST00000556445 CBLCQ9ULV8 474 aa6.07□□□□□ -1.44
SRP54-211ENST00000556445 SRPK3Q9UPE1 567 aa6.07□□□□□ -1.44
SRP54-211ENST00000556445 TNNQ9UQP3 1299 aa6.07□□□□□ -1.44
SRP54-211ENST00000556445 RGPD2P0DJD1 1756 aa6.06□□□□□ -1.44
SRP54-211ENST00000556445 COL18A1P39060 1754 aa6.06□□□□□ -1.44
SRP54-211ENST00000556445 ZNF335Q9H4Z2 1342 aaPredicted RBP6.06□□□□□ -1.44
SRP54-211ENST00000556445 CRYBG1Q9Y4K1 1723 aa6.06□□□□□ -1.44
SRP54-211ENST00000556445 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.06□□□□□ -1.44
SRP54-211ENST00000556445 MAN2B1O00754 1011 aa6.06□□□□□ -1.44
SRP54-211ENST00000556445 KATNA1O75449 491 aa6.06□□□□□ -1.44
SRP54-211ENST00000556445 F2P00734 622 aa6.06□□□□□ -1.44
SRP54-211ENST00000556445 MYL3P08590 195 aa6.06□□□□□ -1.44
SRP54-211ENST00000556445 GNAI3P08754 354 aa6.06□□□□□ -1.44
SRP54-211ENST00000556445 PYGMP11217 842 aa6.06□□□□□ -1.44
SRP54-211ENST00000556445 NAT1P18440 290 aa6.06□□□□□ -1.44
SRP54-211ENST00000556445 CNR2P34972 360 aa6.06□□□□□ -1.44
SRP54-211ENST00000556445 BUD31P41223 144 aaPredicted RBP6.06□□□□□ -1.44
SRP54-211ENST00000556445 PIN1Q13526 163 aaPredicted RBP6.06□□□□□ -1.44
SRP54-211ENST00000556445 MLC1Q15049 377 aa6.06□□□□□ -1.44
SRP54-211ENST00000556445 FAM83BQ5T0W9 1011 aa6.06□□□□□ -1.44
SRP54-211ENST00000556445 FAM102BQ5T8I3 360 aa6.06□□□□□ -1.44
SRP54-211ENST00000556445 PRAMEF18Q5VWM3 479 aa6.06□□□□□ -1.44
SRP54-211ENST00000556445 CD276Q5ZPR3 534 aa6.06□□□□□ -1.44
SRP54-211ENST00000556445 VASNQ6EMK4 673 aa6.06□□□□□ -1.44
SRP54-211ENST00000556445 ARHGAP36Q6ZRI8 547 aa6.06□□□□□ -1.44
SRP54-211ENST00000556445 C16orf59Q7L2K0 433 aa6.06□□□□□ -1.44
SRP54-211ENST00000556445 DGKHQ86XP1 1220 aa6.06□□□□□ -1.44
SRP54-211ENST00000556445 IFNL2Q8IZJ0 200 aa6.06□□□□□ -1.44
SRP54-211ENST00000556445 AFAP1L2Q8N4X5 818 aa6.06□□□□□ -1.44
SRP54-211ENST00000556445 UBR7Q8N806 425 aa6.06□□□□□ -1.44
SRP54-211ENST00000556445 LRRC59Q96AG4 307 aaKnown RBP6.06□□□□□ -1.44
SRP54-211ENST00000556445 WRNIP1Q96S55 665 aa6.06□□□□□ -1.44
SRP54-211ENST00000556445 RTFDC1Q9BY42 306 aaPredicted RBP6.06□□□□□ -1.44
SRP54-211ENST00000556445 DLL4Q9NR61 685 aa6.06□□□□□ -1.44
SRP54-211ENST00000556445 NDOR1Q9UHB4 597 aa6.06□□□□□ -1.44
SRP54-211ENST00000556445 PXDNLA1KZ92 1463 aa6.06□□□□□ -1.44
SRP54-211ENST00000556445 RGPD5Q99666 1765 aa6.06□□□□□ -1.44
SRP54-211ENST00000556445 VIRMAQ69YN4 1812 aaKnown RBP6.05□□□□□ -1.44
SRP54-211ENST00000556445 E2F8A0AVK6 867 aa6.05□□□□□ -1.44
SRP54-211ENST00000556445 MROH6A6NGR9 719 aa6.05□□□□□ -1.44
SRP54-211ENST00000556445 C9orf118A6NHY6 69 aa6.05□□□□□ -1.44
SRP54-211ENST00000556445 ZNF561-AS1K7EIQ3 104 aa6.05□□□□□ -1.44
SRP54-211ENST00000556445 PDE8AO60658 829 aa6.05□□□□□ -1.44
SRP54-211ENST00000556445 CKMP06732 381 aa6.05□□□□□ -1.44
SRP54-211ENST00000556445 SRGAP2CP0DJJ0 459 aa6.05□□□□□ -1.44
SRP54-211ENST00000556445 PDE6AP16499 860 aa6.05□□□□□ -1.44
SRP54-211ENST00000556445 EIF4A1P60842 406 aaKnown RBP6.05□□□□□ -1.44
SRP54-211ENST00000556445 PURAQ00577 322 aaKnown RBP6.05□□□□□ -1.44
SRP54-211ENST00000556445 UBXN11Q5T124 520 aa6.05□□□□□ -1.44
SRP54-211ENST00000556445 PHF19Q5T6S3 580 aa6.05□□□□□ -1.44
SRP54-211ENST00000556445 OSTM1Q86WC4 334 aa6.05□□□□□ -1.44
SRP54-211ENST00000556445 DRC7Q8IY82 874 aa6.05□□□□□ -1.44
SRP54-211ENST00000556445 MBD6Q96DN6 1003 aa6.05□□□□□ -1.44
SRP54-211ENST00000556445 SCLYQ96I15 445 aa6.05□□□□□ -1.44
SRP54-211ENST00000556445 CAMKK2Q96RR4 588 aa6.05□□□□□ -1.44
SRP54-211ENST00000556445 PRDM11Q9NQV5 511 aa6.05□□□□□ -1.44
SRP54-211ENST00000556445 CATSPERZQ9NTU4 200 aa6.05□□□□□ -1.44
SRP54-211ENST00000556445 NHSL1Q5SYE7 1610 aa6.05□□□□□ -1.44
SRP54-211ENST00000556445 KDM3BQ7LBC6 1761 aa6.05□□□□□ -1.44
SRP54-211ENST00000556445 ADAMTS7Q9UKP4 1686 aa6.04□□□□□ -1.44
SRP54-211ENST00000556445 WDR17Q8IZU2 1322 aa6.04□□□□□ -1.44
SRP54-211ENST00000556445 GOLGA6CA6NDK9 693 aa6.04□□□□□ -1.44
SRP54-211ENST00000556445 GOLGA6BA6NDN3 693 aa6.04□□□□□ -1.44
SRP54-211ENST00000556445 FAM90A27PA6NNH2 459 aa6.04□□□□□ -1.44
SRP54-211ENST00000556445 ZNF839A8K0R7 811 aa6.04□□□□□ -1.44
SRP54-211ENST00000556445 PRPF3O43395 683 aaKnown RBP6.04□□□□□ -1.44
SRP54-211ENST00000556445 EFCAB14O75071 495 aa6.04□□□□□ -1.44
SRP54-211ENST00000556445 CYP7B1O75881 506 aa6.04□□□□□ -1.44
SRP54-211ENST00000556445 IFIT2P09913 472 aaKnown RBP6.04□□□□□ -1.44
SRP54-211ENST00000556445 GOLGA6DP0CG33 693 aa6.04□□□□□ -1.44
SRP54-211ENST00000556445 SRGNP10124 158 aa6.04□□□□□ -1.44
SRP54-211ENST00000556445 CALRP27797 417 aaKnown RBP6.04□□□□□ -1.44
SRP54-211ENST00000556445 HTR3AP46098 478 aa6.04□□□□□ -1.44
SRP54-211ENST00000556445 JAM2P57087 298 aa6.04□□□□□ -1.44
SRP54-211ENST00000556445 PFKPQ01813 784 aa6.04□□□□□ -1.44
SRP54-211ENST00000556445 NUCB1Q02818 461 aa6.04□□□□□ -1.44
SRP54-211ENST00000556445 SKIDA1Q1XH10 827 aa6.04□□□□□ -1.44
SRP54-211ENST00000556445 FIGNQ5HY92 759 aa6.04□□□□□ -1.44
SRP54-211ENST00000556445 CCDC70Q6NSX1 233 aa6.04□□□□□ -1.44
SRP54-211ENST00000556445 PTRH1Q86Y79 214 aaKnown RBP6.04□□□□□ -1.44
SRP54-211ENST00000556445 NLGN4XQ8N0W4 816 aa6.04□□□□□ -1.44
SRP54-211ENST00000556445 MAGEB6Q8N7X4 407 aa6.04□□□□□ -1.44
SRP54-211ENST00000556445 ANKRD44Q8N8A2 993 aa6.04□□□□□ -1.44
SRP54-211ENST00000556445 ATL2Q8NHH9 583 aa6.04□□□□□ -1.44
SRP54-211ENST00000556445 BDH2Q9BUT1 245 aa6.04□□□□□ -1.44
SRP54-211ENST00000556445 MRPL4Q9BYD3 311 aaKnown RBP6.04□□□□□ -1.44
SRP54-211ENST00000556445 L2HGDHQ9H9P8 463 aa6.04□□□□□ -1.44
SRP54-211ENST00000556445 SMURF1Q9HCE7 757 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms