RNA–Protein interactions for RNA: ENST00000556412.4

VIPAS39-208, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-208ENST00000556412 PCDHB7Q9Y5E2 793 aa15.35■□□□□ 0.05
VIPAS39-208ENST00000556412 SIP14410 1827 aa15.35■□□□□ 0.05
VIPAS39-208ENST00000556412 LTBP2Q14767 1821 aa15.35■□□□□ 0.05
VIPAS39-208ENST00000556412 SYCE3A1L190 88 aa15.34■□□□□ 0.05
VIPAS39-208ENST00000556412 PSMA7O14818 248 aa15.34■□□□□ 0.05
VIPAS39-208ENST00000556412 MCF2P10911 925 aa15.34■□□□□ 0.05
VIPAS39-208ENST00000556412 AKAP5P24588 427 aa15.34■□□□□ 0.05
VIPAS39-208ENST00000556412 CYP2J2P51589 502 aa15.34■□□□□ 0.05
VIPAS39-208ENST00000556412 NLRP12P59046 1061 aa15.34■□□□□ 0.05
VIPAS39-208ENST00000556412 MCL1Q07820 350 aa15.34■□□□□ 0.05
VIPAS39-208ENST00000556412 HACE1Q8IYU2 909 aa15.34■□□□□ 0.05
VIPAS39-208ENST00000556412 SMG8Q8ND04 991 aaKnown RBP15.34■□□□□ 0.05
VIPAS39-208ENST00000556412 SAAL1Q96ER3 474 aa15.34■□□□□ 0.05
VIPAS39-208ENST00000556412 HAPLN2Q9GZV7 340 aa15.34■□□□□ 0.05
VIPAS39-208ENST00000556412 GZF1Q9H116 711 aaPredicted RBP15.34■□□□□ 0.05
VIPAS39-208ENST00000556412 KCTD10Q9H3F6 313 aa15.34■□□□□ 0.05
VIPAS39-208ENST00000556412 TYW1Q9NV66 732 aaKnown RBP15.34■□□□□ 0.05
VIPAS39-208ENST00000556412 PARP2Q9UGN5 583 aa15.34■□□□□ 0.05
VIPAS39-208ENST00000556412 A0A0B4J269 797 aa15.33■□□□□ 0.05
VIPAS39-208ENST00000556412 ABLIM1O14639 778 aa15.33■□□□□ 0.05
VIPAS39-208ENST00000556412 CALUO43852 315 aaPredicted RBP15.33■□□□□ 0.05
VIPAS39-208ENST00000556412 STAG3L1P0CL83 205 aa15.33■□□□□ 0.05
VIPAS39-208ENST00000556412 FGFR1P11362 822 aa15.33■□□□□ 0.05
VIPAS39-208ENST00000556412 ITGA4P13612 1032 aa15.33■□□□□ 0.05
VIPAS39-208ENST00000556412 ATP2A2P16615 1042 aaKnown RBP15.33■□□□□ 0.05
VIPAS39-208ENST00000556412 ADSSP30520 456 aa15.33■□□□□ 0.05
VIPAS39-208ENST00000556412 FAM43BQ6ZT52 329 aaPredicted RBP15.33■□□□□ 0.05
VIPAS39-208ENST00000556412 NPAS4Q8IUM7 802 aa15.33■□□□□ 0.05
VIPAS39-208ENST00000556412 GOLGA5Q8TBA6 731 aa15.33■□□□□ 0.05
VIPAS39-208ENST00000556412 PGBD4Q96DM1 585 aa15.33■□□□□ 0.05
VIPAS39-208ENST00000556412 ZBED2Q9BTP6 218 aa15.33■□□□□ 0.05
VIPAS39-208ENST00000556412 TRAIPQ9BWF2 469 aa15.33■□□□□ 0.05
VIPAS39-208ENST00000556412 RNF39Q9H2S5 420 aa15.33■□□□□ 0.05
VIPAS39-208ENST00000556412 TMEM161AQ9NX61 479 aa15.33■□□□□ 0.05
VIPAS39-208ENST00000556412 SNTG2Q9NY99 539 aa15.33■□□□□ 0.05
VIPAS39-208ENST00000556412 AGO2Q9UKV8 859 aaKnown RBP15.33■□□□□ 0.05
VIPAS39-208ENST00000556412 GOLGA8IPA6NC78 632 aa15.33■□□□□ 0.04
VIPAS39-208ENST00000556412 GOLGA8JA6NMD2 632 aa15.33■□□□□ 0.04
VIPAS39-208ENST00000556412 MEIS3P2A8K0S8 358 aa15.33■□□□□ 0.04
VIPAS39-208ENST00000556412 PPP1R3GB7ZBB8 358 aa15.33■□□□□ 0.04
VIPAS39-208ENST00000556412 PDXKO00764 312 aa15.33■□□□□ 0.04
VIPAS39-208ENST00000556412 LETM1O95202 739 aaPredicted RBP15.33■□□□□ 0.04
VIPAS39-208ENST00000556412 PPP1R2P41236 205 aa15.33■□□□□ 0.04
VIPAS39-208ENST00000556412 STX17P56962 302 aa15.33■□□□□ 0.04
VIPAS39-208ENST00000556412 ZBTB41Q5SVQ8 909 aa15.33■□□□□ 0.04
VIPAS39-208ENST00000556412 MLKLQ8NB16 471 aa15.33■□□□□ 0.04
VIPAS39-208ENST00000556412 NELFBQ8WX92 580 aa15.33■□□□□ 0.04
VIPAS39-208ENST00000556412 TSG101Q99816 390 aa15.33■□□□□ 0.04
VIPAS39-208ENST00000556412 FAM213AQ9BRX8 229 aa15.33■□□□□ 0.04
VIPAS39-208ENST00000556412 CCDC94Q9BW85 323 aaPredicted RBP15.33■□□□□ 0.04
VIPAS39-208ENST00000556412 SEMA6BQ9H3T3 888 aa15.33■□□□□ 0.04
VIPAS39-208ENST00000556412 KLK14Q9P0G3 267 aa15.33■□□□□ 0.04
VIPAS39-208ENST00000556412 SCN5AQ14524 2016 aa15.33■□□□□ 0.04
VIPAS39-208ENST00000556412 TRIM49BA6NDI0 452 aa15.32■□□□□ 0.04
VIPAS39-208ENST00000556412 OGTO15294 1046 aa15.32■□□□□ 0.04
VIPAS39-208ENST00000556412 ATF7P17544 494 aaPredicted RBP15.32■□□□□ 0.04
VIPAS39-208ENST00000556412 GARTP22102 1010 aa15.32■□□□□ 0.04
VIPAS39-208ENST00000556412 ACOT2P49753 483 aa15.32■□□□□ 0.04
VIPAS39-208ENST00000556412 FAM189BP81408 668 aa15.32■□□□□ 0.04
VIPAS39-208ENST00000556412 PAK1Q13153 545 aa15.32■□□□□ 0.04
VIPAS39-208ENST00000556412 STX1AQ16623 288 aa15.32■□□□□ 0.04
VIPAS39-208ENST00000556412 ZSCAN23Q3MJ62 389 aa15.32■□□□□ 0.04
VIPAS39-208ENST00000556412 COBLL1Q53SF7 1204 aa15.32■□□□□ 0.04
VIPAS39-208ENST00000556412 TMEM192Q8IY95 271 aa15.32■□□□□ 0.04
VIPAS39-208ENST00000556412 ABI1Q8IZP0 508 aa15.32■□□□□ 0.04
VIPAS39-208ENST00000556412 P2RX5Q93086 422 aa15.32■□□□□ 0.04
VIPAS39-208ENST00000556412 TOP1MTQ969P6 601 aa15.32■□□□□ 0.04
VIPAS39-208ENST00000556412 DHTKD1Q96HY7 919 aaPredicted RBP15.32■□□□□ 0.04
VIPAS39-208ENST00000556412 SLC9A7Q96T83 725 aa15.32■□□□□ 0.04
VIPAS39-208ENST00000556412 RNF216Q9NWF9 866 aaPredicted RBP15.32■□□□□ 0.04
VIPAS39-208ENST00000556412 HSPBP1Q9NZL4 362 aa15.32■□□□□ 0.04
VIPAS39-208ENST00000556412 DACH1Q9UI36 760 aa15.32■□□□□ 0.04
VIPAS39-208ENST00000556412 INPP5FQ9Y2H2 1132 aa15.32■□□□□ 0.04
VIPAS39-208ENST00000556412 STYXL1Q9Y6J8 313 aa15.32■□□□□ 0.04
VIPAS39-208ENST00000556412 EXOC3O60645 756 aa15.31■□□□□ 0.04
VIPAS39-208ENST00000556412 ZNF623O75123 536 aa15.31■□□□□ 0.04
VIPAS39-208ENST00000556412 RECQL4O94761 1208 aa15.31■□□□□ 0.04
VIPAS39-208ENST00000556412 EOMESO95936 686 aa15.31■□□□□ 0.04
VIPAS39-208ENST00000556412 NR3C1P04150 777 aa15.31■□□□□ 0.04
VIPAS39-208ENST00000556412 BMP8BP34820 402 aa15.31■□□□□ 0.04
VIPAS39-208ENST00000556412 TNFSF9P41273 254 aa15.31■□□□□ 0.04
VIPAS39-208ENST00000556412 GRM5P41594 1212 aa15.31■□□□□ 0.04
VIPAS39-208ENST00000556412 GATMP50440 423 aa15.31■□□□□ 0.04
VIPAS39-208ENST00000556412 PMS1P54277 932 aaKnown RBP15.31■□□□□ 0.04
VIPAS39-208ENST00000556412 YARSP54577 528 aaKnown RBP15.31■□□□□ 0.04
VIPAS39-208ENST00000556412 TYRO3Q06418 890 aa15.31■□□□□ 0.04
VIPAS39-208ENST00000556412 TDHQ8IZJ6 230 aa15.31■□□□□ 0.04
VIPAS39-208ENST00000556412 RDH13Q8NBN7 331 aa15.31■□□□□ 0.04
VIPAS39-208ENST00000556412 ZSWIM2Q8NEG5 633 aa15.31■□□□□ 0.04
VIPAS39-208ENST00000556412 HELQQ8TDG4 1101 aa15.31■□□□□ 0.04
VIPAS39-208ENST00000556412 FAM212AQ96EL1 285 aa15.31■□□□□ 0.04
VIPAS39-208ENST00000556412 EEF2KMTQ96G04 330 aa15.31■□□□□ 0.04
VIPAS39-208ENST00000556412 ACAP3Q96P50 834 aa15.31■□□□□ 0.04
VIPAS39-208ENST00000556412 ELAC1Q9H777 363 aaKnown RBP15.31■□□□□ 0.04
VIPAS39-208ENST00000556412 RSAD1Q9HA92 442 aa15.31■□□□□ 0.04
VIPAS39-208ENST00000556412 RNF19AQ9NV58 838 aa15.31■□□□□ 0.04
VIPAS39-208ENST00000556412 ANO10Q9NW15 660 aa15.31■□□□□ 0.04
VIPAS39-208ENST00000556412 TNRC18O15417 2968 aaPredicted RBP15.31■□□□□ 0.04
VIPAS39-208ENST00000556412 NR2F2P24468 414 aa15.31■□□□□ 0.04
VIPAS39-208ENST00000556412 CCNE1P24864 410 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms