RNA–Protein interactions for RNA: ENST00000556356.1

LRP1-211, Transcript of LDL receptor related protein 1, humanhuman

TSL 2

Gene LRP1, Length 5,114 nt, Biotype retained intron, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-211ENST00000556356 CLCN3P51790 818 aa16.31■□□□□ 0.2
LRP1-211ENST00000556356 RIOX2Q8IUF8 465 aa16.31■□□□□ 0.2
LRP1-211ENST00000556356 PPM1EQ8WY54 764 aa16.31■□□□□ 0.2
LRP1-211ENST00000556356 MAGED2Q9UNF1 606 aaPredicted RBP16.31■□□□□ 0.2
LRP1-211ENST00000556356 KLRC1P26715 233 aa16.31■□□□□ 0.2
LRP1-211ENST00000556356 MUM1L1Q5H9M0 696 aa16.31■□□□□ 0.2
LRP1-211ENST00000556356 GANCQ8TET4 914 aa16.31■□□□□ 0.2
LRP1-211ENST00000556356 MKNK1Q9BUB5 465 aa16.31■□□□□ 0.2
LRP1-211ENST00000556356 RANBP17Q9H2T7 1088 aaKnown RBP16.31■□□□□ 0.2
LRP1-211ENST00000556356 HMX1Q9NP08 348 aaPredicted RBP16.31■□□□□ 0.2
LRP1-211ENST00000556356 TBX20Q9UMR3 447 aa16.31■□□□□ 0.2
LRP1-211ENST00000556356 H3BRB1 525 aa16.31■□□□□ 0.2
LRP1-211ENST00000556356 MED24O75448 989 aa16.31■□□□□ 0.2
LRP1-211ENST00000556356 HOXC6P09630 235 aa16.31■□□□□ 0.2
LRP1-211ENST00000556356 NAMPTP43490 491 aa16.31■□□□□ 0.2
LRP1-211ENST00000556356 PKN1Q16512 942 aa16.31■□□□□ 0.2
LRP1-211ENST00000556356 ZNF449Q6P9G9 518 aa16.31■□□□□ 0.2
LRP1-211ENST00000556356 TUT1Q9H6E5 874 aaKnown RBP16.31■□□□□ 0.2
LRP1-211ENST00000556356 FMO5P49326 533 aa16.31■□□□□ 0.2
LRP1-211ENST00000556356 GUCY2DQ02846 1103 aa16.31■□□□□ 0.2
LRP1-211ENST00000556356 GRB10Q13322 594 aa16.31■□□□□ 0.2
LRP1-211ENST00000556356 DCP1BQ8IZD4 617 aaKnown RBP16.31■□□□□ 0.2
LRP1-211ENST00000556356 AFAP1L1Q8TED9 768 aa16.31■□□□□ 0.2
LRP1-211ENST00000556356 UPF1Q92900 1129 aaKnown RBP eCLIP16.31■□□□□ 0.22e-7■■■■□ 21.1
LRP1-211ENST00000556356 ZNF541Q9H0D2 1346 aa16.3■□□□□ 0.2
LRP1-211ENST00000556356 ATN1P54259 1190 aaPredicted RBP16.3■□□□□ 0.2
LRP1-211ENST00000556356 TADA2BQ86TJ2 420 aa16.3■□□□□ 0.2
LRP1-211ENST00000556356 PRPF31Q8WWY3 499 aaKnown RBP16.3■□□□□ 0.2
LRP1-211ENST00000556356 TJP3O95049 919 aa16.3■□□□□ 0.2
LRP1-211ENST00000556356 BASP1P80723 227 aaKnown RBP16.3■□□□□ 0.2
LRP1-211ENST00000556356 FAM102AQ5T9C2 384 aaPredicted RBP16.3■□□□□ 0.2
LRP1-211ENST00000556356 NIPA1Q7RTP0 329 aa16.3■□□□□ 0.2
LRP1-211ENST00000556356 C4orf19Q8IY42 314 aa16.3■□□□□ 0.2
LRP1-211ENST00000556356 RUSC1Q9BVN2 902 aa16.3■□□□□ 0.2
LRP1-211ENST00000556356 LMCD1Q9NZU5 365 aa16.3■□□□□ 0.2
LRP1-211ENST00000556356 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.3■□□□□ 0.2
LRP1-211ENST00000556356 HOXA2O43364 376 aa16.3■□□□□ 0.2
LRP1-211ENST00000556356 CPP00450 1065 aa16.3■□□□□ 0.2
LRP1-211ENST00000556356 ERCC6LQ2NKX8 1250 aa16.3■□□□□ 0.2
LRP1-211ENST00000556356 VPS52Q8N1B4 723 aa16.3■□□□□ 0.2
LRP1-211ENST00000556356 SEPT8Q92599 483 aa16.3■□□□□ 0.2
LRP1-211ENST00000556356 XPNPEP3Q9NQH7 507 aa16.3■□□□□ 0.2
LRP1-211ENST00000556356 HPCAL4Q9UM19 191 aa16.3■□□□□ 0.2
LRP1-211ENST00000556356 LMO7Q8WWI1 1683 aa16.3■□□□□ 0.2
LRP1-211ENST00000556356 PCSK1P29120 753 aa16.3■□□□□ 0.2
LRP1-211ENST00000556356 A1CFQ9NQ94 594 aaKnown RBP16.3■□□□□ 0.2
LRP1-211ENST00000556356 PRDM10Q9NQV6 1147 aa16.3■□□□□ 0.2
LRP1-211ENST00000556356 IP6K2Q9UHH9 426 aa16.3■□□□□ 0.2
LRP1-211ENST00000556356 ATP11BQ9Y2G3 1177 aa16.3■□□□□ 0.2
LRP1-211ENST00000556356 PPME1Q9Y570 386 aa16.3■□□□□ 0.2
LRP1-211ENST00000556356 ZNF142P52746 1687 aaPredicted RBP16.29■□□□□ 0.2
LRP1-211ENST00000556356 KRT17Q04695 432 aa16.29■□□□□ 0.2
LRP1-211ENST00000556356 LY6KQ17RY6 165 aa16.29■□□□□ 0.2
LRP1-211ENST00000556356 MYRIPQ8NFW9 859 aa16.29■□□□□ 0.2
LRP1-211ENST00000556356 SKA2Q8WVK7 121 aaPredicted RBP16.29■□□□□ 0.2
LRP1-211ENST00000556356 EHD2Q9NZN4 543 aa16.29■□□□□ 0.2
LRP1-211ENST00000556356 LIMA1Q9UHB6 759 aaKnown RBP16.29■□□□□ 0.2
LRP1-211ENST00000556356 DIS3Q9Y2L1 958 aaKnown RBP16.29■□□□□ 0.2
LRP1-211ENST00000556356 ZRANB2O95218 330 aaKnown RBP eCLIP16.29■□□□□ 0.2
LRP1-211ENST00000556356 TAL1P17542 331 aaPredicted RBP16.29■□□□□ 0.2
LRP1-211ENST00000556356 ACVR2BQ13705 512 aa16.29■□□□□ 0.2
LRP1-211ENST00000556356 UBQLN1Q9UMX0 589 aaKnown RBP16.29■□□□□ 0.2
LRP1-211ENST00000556356 SLC4A1P02730 911 aa16.29■□□□□ 0.2
LRP1-211ENST00000556356 FTLP02792 175 aaPredicted RBP16.29■□□□□ 0.2
LRP1-211ENST00000556356 NNMTP40261 264 aa16.29■□□□□ 0.2
LRP1-211ENST00000556356 PNPLA4P41247 253 aa16.29■□□□□ 0.2
LRP1-211ENST00000556356 EFHC2Q5JST6 749 aa16.29■□□□□ 0.2
LRP1-211ENST00000556356 CCDC121Q6ZUS5 278 aa16.29■□□□□ 0.2
LRP1-211ENST00000556356 TLK2Q86UE8 772 aa16.29■□□□□ 0.2
LRP1-211ENST00000556356 ZNF564Q8TBZ8 553 aaPredicted RBP16.29■□□□□ 0.2
LRP1-211ENST00000556356 ATP8B4Q8TF62 1192 aa16.29■□□□□ 0.2
LRP1-211ENST00000556356 GDAP1L1Q96MZ0 367 aa16.29■□□□□ 0.2
LRP1-211ENST00000556356 APEX2Q9UBZ4 518 aa16.29■□□□□ 0.2
LRP1-211ENST00000556356 CDK17Q00537 523 aa16.29■□□□□ 0.2
LRP1-211ENST00000556356 TAP1Q03518 808 aa16.29■□□□□ 0.2
LRP1-211ENST00000556356 PDXDC1Q6P996 788 aa16.29■□□□□ 0.2
LRP1-211ENST00000556356 RASGRP2Q7LDG7 609 aa16.29■□□□□ 0.2
LRP1-211ENST00000556356 NUP85Q9BW27 656 aa16.29■□□□□ 0.2
LRP1-211ENST00000556356 TAF1DQ9H5J8 278 aaPredicted RBP16.29■□□□□ 0.2
LRP1-211ENST00000556356 A6NNZ2 444 aa16.28■□□□□ 0.2
LRP1-211ENST00000556356 TEX33O43247 280 aa16.28■□□□□ 0.2
LRP1-211ENST00000556356 TUBB8Q3ZCM7 444 aa16.28■□□□□ 0.2
LRP1-211ENST00000556356 CC2D1AQ6P1N0 951 aaPredicted RBP16.28■□□□□ 0.2
LRP1-211ENST00000556356 DHX40Q8IX18 779 aaKnown RBP16.28■□□□□ 0.2
LRP1-211ENST00000556356 YAF2Q8IY57 180 aa16.28■□□□□ 0.2
LRP1-211ENST00000556356 TTC13Q8NBP0 860 aa16.28■□□□□ 0.2
LRP1-211ENST00000556356 KIFC3Q9BVG8 833 aa16.28■□□□□ 0.2
LRP1-211ENST00000556356 COLEC11Q9BWP8 271 aa16.28■□□□□ 0.2
LRP1-211ENST00000556356 TMEM8AQ9HCN3 771 aa16.28■□□□□ 0.2
LRP1-211ENST00000556356 SHPRHQ149N8 1683 aa16.28■□□□□ 0.2
LRP1-211ENST00000556356 TTC26A0AVF1 554 aa16.28■□□□□ 0.2
LRP1-211ENST00000556356 TMEM88BA6NKF7 163 aa16.28■□□□□ 0.2
LRP1-211ENST00000556356 GMNNO75496 209 aa16.28■□□□□ 0.2
LRP1-211ENST00000556356 ZNF286BP0CG31 522 aa16.28■□□□□ 0.2
LRP1-211ENST00000556356 CNTN2Q02246 1040 aa16.28■□□□□ 0.2
LRP1-211ENST00000556356 CCDC6Q16204 474 aa16.28■□□□□ 0.2
LRP1-211ENST00000556356 IQSEC1Q6DN90 963 aa16.28■□□□□ 0.2
LRP1-211ENST00000556356 MOB2Q70IA6 237 aa16.28■□□□□ 0.2
LRP1-211ENST00000556356 CYP26A1O43174 497 aa16.28■□□□□ 0.2
LRP1-211ENST00000556356 LCP1P13796 627 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms