RNA–Protein interactions for RNA: ENST00000556315.5

ATXN3-239, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-239ENST00000556315 TNNQ9UQP3 1299 aa5.71□□□□□ -1.5
ATXN3-239ENST00000556315 INSL6Q9Y581 213 aa5.71□□□□□ -1.5
ATXN3-239ENST00000556315 RAD50Q92878 1312 aa5.71□□□□□ -1.5
ATXN3-239ENST00000556315 XIRP2A4UGR9 3374 aa5.7□□□□□ -1.5
ATXN3-239ENST00000556315 FAM221AA4D161 298 aa5.7□□□□□ -1.5
ATXN3-239ENST00000556315 CILPO75339 1184 aa5.7□□□□□ -1.5
ATXN3-239ENST00000556315 F13A1P00488 732 aa5.7□□□□□ -1.5
ATXN3-239ENST00000556315 CXCL10P02778 98 aa5.7□□□□□ -1.5
ATXN3-239ENST00000556315 IFIT2P09913 472 aaKnown RBP5.7□□□□□ -1.5
ATXN3-239ENST00000556315 ITIH2P19823 946 aa5.7□□□□□ -1.5
ATXN3-239ENST00000556315 STAT2P52630 851 aa5.7□□□□□ -1.5
ATXN3-239ENST00000556315 MESP2Q0VG99 397 aa5.7□□□□□ -1.5
ATXN3-239ENST00000556315 TIGD5Q53EQ6 642 aa5.7□□□□□ -1.5
ATXN3-239ENST00000556315 HERC4Q5GLZ8 1057 aaPredicted RBP5.7□□□□□ -1.5
ATXN3-239ENST00000556315 ZKSCAN2Q63HK3 967 aa5.7□□□□□ -1.5
ATXN3-239ENST00000556315 ZSCAN25Q6NSZ9 544 aa5.7□□□□□ -1.5
ATXN3-239ENST00000556315 NSMFQ6X4W1 530 aa5.7□□□□□ -1.5
ATXN3-239ENST00000556315 BNC2Q6ZN30 1099 aaPredicted RBP5.7□□□□□ -1.5
ATXN3-239ENST00000556315 TMCO2Q7Z6W1 182 aaPredicted RBP5.7□□□□□ -1.5
ATXN3-239ENST00000556315 SPACA3Q8IXA5 215 aa5.7□□□□□ -1.5
ATXN3-239ENST00000556315 OR6J1Q8NGC5 347 aa5.7□□□□□ -1.5
ATXN3-239ENST00000556315 ASB11Q8WXH4 323 aa5.7□□□□□ -1.5
ATXN3-239ENST00000556315 EDAQ92838 391 aa5.7□□□□□ -1.5
ATXN3-239ENST00000556315 CEP95Q96GE4 821 aa5.7□□□□□ -1.5
ATXN3-239ENST00000556315 SAMD11Q96NU1 681 aa5.7□□□□□ -1.5
ATXN3-239ENST00000556315 MPHOSPH6Q99547 160 aaKnown RBP5.7□□□□□ -1.5
ATXN3-239ENST00000556315 LRRC3Q9BY71 257 aa5.7□□□□□ -1.5
ATXN3-239ENST00000556315 IRF2BPLQ9H1B7 796 aa5.7□□□□□ -1.5
ATXN3-239ENST00000556315 ACBD3Q9H3P7 528 aa5.7□□□□□ -1.5
ATXN3-239ENST00000556315 IL1RAPL2Q9NP60 686 aa5.7□□□□□ -1.5
ATXN3-239ENST00000556315 GTF2IRD1Q9UHL9 959 aa5.7□□□□□ -1.5
ATXN3-239ENST00000556315 EXOC6BQ9Y2D4 811 aa5.7□□□□□ -1.5
ATXN3-239ENST00000556315 INPP5FQ9Y2H2 1132 aa5.7□□□□□ -1.5
ATXN3-239ENST00000556315 DDX49Q9Y6V7 483 aaKnown RBP5.7□□□□□ -1.5
ATXN3-239ENST00000556315 ZBED9Q6R2W3 1325 aa5.7□□□□□ -1.5
ATXN3-239ENST00000556315 A0A0G2JMZ2 1700 aa5.69□□□□□ -1.5
ATXN3-239ENST00000556315 H3BNC9 293 aa5.69□□□□□ -1.5
ATXN3-239ENST00000556315 NBNO60934 754 aa5.69□□□□□ -1.5
ATXN3-239ENST00000556315 ATP5JP18859 108 aa5.69□□□□□ -1.5
ATXN3-239ENST00000556315 MCCP23508 829 aa5.69□□□□□ -1.5
ATXN3-239ENST00000556315 SLC1A4P43007 532 aa5.69□□□□□ -1.5
ATXN3-239ENST00000556315 ALDH5A1P51649 535 aaPredicted RBP5.69□□□□□ -1.5
ATXN3-239ENST00000556315 DEFB103AP81534 67 aa5.69□□□□□ -1.5
ATXN3-239ENST00000556315 RBL2Q08999 1139 aa5.69□□□□□ -1.5
ATXN3-239ENST00000556315 APOBRQ0VD83 1088 aa5.69□□□□□ -1.5
ATXN3-239ENST00000556315 IKQ13123 557 aaPredicted RBP5.69□□□□□ -1.5
ATXN3-239ENST00000556315 PAK2Q13177 524 aa5.69□□□□□ -1.5
ATXN3-239ENST00000556315 GPM6BQ13491 265 aa5.69□□□□□ -1.5
ATXN3-239ENST00000556315 BAATQ14032 418 aaPredicted RBP5.69□□□□□ -1.5
ATXN3-239ENST00000556315 NKPD1Q17RQ9 610 aa5.69□□□□□ -1.5
ATXN3-239ENST00000556315 EPC2Q52LR7 807 aa5.69□□□□□ -1.5
ATXN3-239ENST00000556315 MUM1L1Q5H9M0 696 aa5.69□□□□□ -1.5
ATXN3-239ENST00000556315 PPM1JQ5JR12 505 aa5.69□□□□□ -1.5
ATXN3-239ENST00000556315 WIPI1Q5MNZ9 446 aaPredicted RBP5.69□□□□□ -1.5
ATXN3-239ENST00000556315 LCE4AQ5TA78 99 aa5.69□□□□□ -1.5
ATXN3-239ENST00000556315 RCSD1Q6JBY9 416 aa5.69□□□□□ -1.5
ATXN3-239ENST00000556315 CEP85Q6P2H3 762 aa5.69□□□□□ -1.5
ATXN3-239ENST00000556315 EP400NLQ6ZTU2 488 aa5.69□□□□□ -1.5
ATXN3-239ENST00000556315 LRRC8DQ7L1W4 858 aa5.69□□□□□ -1.5
ATXN3-239ENST00000556315 SESTD1Q86VW0 696 aa5.69□□□□□ -1.5
ATXN3-239ENST00000556315 PRSS33Q8NF86 280 aa5.69□□□□□ -1.5
ATXN3-239ENST00000556315 SCFD2Q8WU76 684 aa5.69□□□□□ -1.5
ATXN3-239ENST00000556315 ANKS1AQ92625 1134 aa5.69□□□□□ -1.5
ATXN3-239ENST00000556315 KIF1BPQ96EK5 621 aa5.69□□□□□ -1.5
ATXN3-239ENST00000556315 STRBPQ96SI9 672 aaKnown RBP5.69□□□□□ -1.5
ATXN3-239ENST00000556315 C17orf80Q9BSJ5 609 aa5.69□□□□□ -1.5
ATXN3-239ENST00000556315 KRTAP4-9Q9BYQ8 210 aa5.69□□□□□ -1.5
ATXN3-239ENST00000556315 PUS7LQ9H0K6 701 aaKnown RBP5.69□□□□□ -1.5
ATXN3-239ENST00000556315 BOLA2Q9H3K6 86 aa5.69□□□□□ -1.5
ATXN3-239ENST00000556315 NSUN3Q9H649 340 aaKnown RBP5.69□□□□□ -1.5
ATXN3-239ENST00000556315 ISY1Q9ULR0 285 aaKnown RBP5.69□□□□□ -1.5
ATXN3-239ENST00000556315 CHD9Q3L8U1 2897 aa5.69□□□□□ -1.5
ATXN3-239ENST00000556315 TMEM221A6NGB7 291 aa5.68□□□□□ -1.5
ATXN3-239ENST00000556315 GSG1L2A8MUP6 293 aa5.68□□□□□ -1.5
ATXN3-239ENST00000556315 B4DLN1 442 aa5.68□□□□□ -1.5
ATXN3-239ENST00000556315 M0R296 226 aa5.68□□□□□ -1.5
ATXN3-239ENST00000556315 FANCGO15287 622 aa5.68□□□□□ -1.5
ATXN3-239ENST00000556315 PRDM1O75626 825 aa5.68□□□□□ -1.5
ATXN3-239ENST00000556315 EOMESO95936 686 aa5.68□□□□□ -1.5
ATXN3-239ENST00000556315 AMHP03971 560 aa5.68□□□□□ -1.5
ATXN3-239ENST00000556315 ICAM1P05362 532 aa5.68□□□□□ -1.5
ATXN3-239ENST00000556315 TSPY3P0CV98 308 aa5.68□□□□□ -1.5
ATXN3-239ENST00000556315 TSPY8P0CW00 308 aa5.68□□□□□ -1.5
ATXN3-239ENST00000556315 TXNP10599 105 aaKnown RBP5.68□□□□□ -1.5
ATXN3-239ENST00000556315 CKBP12277 381 aa5.68□□□□□ -1.5
ATXN3-239ENST00000556315 CASTP20810 708 aaKnown RBP5.68□□□□□ -1.5
ATXN3-239ENST00000556315 LTBRP36941 435 aa5.68□□□□□ -1.5
ATXN3-239ENST00000556315 MRPL12P52815 198 aaKnown RBP5.68□□□□□ -1.5
ATXN3-239ENST00000556315 CHMP4BP1P59074 171 aa5.68□□□□□ -1.5
ATXN3-239ENST00000556315 HTRA4P83105 476 aaPredicted RBP5.68□□□□□ -1.5
ATXN3-239ENST00000556315 TFAP4Q01664 338 aa5.68□□□□□ -1.5
ATXN3-239ENST00000556315 TCF15Q12870 199 aa5.68□□□□□ -1.5
ATXN3-239ENST00000556315 INPP5AQ14642 412 aa5.68□□□□□ -1.5
ATXN3-239ENST00000556315 PPP2R5BQ15173 497 aa5.68□□□□□ -1.5
ATXN3-239ENST00000556315 SMAD2Q15796 467 aaKnown RBP5.68□□□□□ -1.5
ATXN3-239ENST00000556315 FBLN7Q53RD9 439 aa5.68□□□□□ -1.5
ATXN3-239ENST00000556315 TCEAL5Q5H9L2 206 aa5.68□□□□□ -1.5
ATXN3-239ENST00000556315 LRFN4Q6PJG9 635 aa5.68□□□□□ -1.5
ATXN3-239ENST00000556315 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.68□□□□□ -1.5
ATXN3-239ENST00000556315 SPOCD1Q6ZMY3 1216 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms