RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 MATR3P43243 847 aaKnown RBP eCLIP10.8□□□□□ -0.68
PSEN1-213ENST00000555386 GATMP50440 423 aa10.8□□□□□ -0.68
PSEN1-213ENST00000555386 EFNA5P52803 228 aa10.8□□□□□ -0.68
PSEN1-213ENST00000555386 STRN3Q13033 797 aa10.8□□□□□ -0.68
PSEN1-213ENST00000555386 MORC3Q14149 939 aa10.8□□□□□ -0.68
PSEN1-213ENST00000555386 AMHR2Q16671 573 aa10.8□□□□□ -0.68
PSEN1-213ENST00000555386 TPD52L1Q16890 204 aaPredicted RBP10.8□□□□□ -0.68
PSEN1-213ENST00000555386 HAUS6Q7Z4H7 955 aa10.8□□□□□ -0.68
PSEN1-213ENST00000555386 FILIP1Q7Z7B0 1213 aa10.8□□□□□ -0.68
PSEN1-213ENST00000555386 ZBTB33Q86T24 672 aa10.8□□□□□ -0.68
PSEN1-213ENST00000555386 HERC6Q8IVU3 1022 aa10.8□□□□□ -0.68
PSEN1-213ENST00000555386 TMEM161BQ8NDZ6 487 aa10.8□□□□□ -0.68
PSEN1-213ENST00000555386 CCDC112Q8NEF3 446 aa10.8□□□□□ -0.68
PSEN1-213ENST00000555386 ENOX1Q8TC92 643 aaKnown RBP10.8□□□□□ -0.68
PSEN1-213ENST00000555386 LPPQ93052 612 aa10.8□□□□□ -0.68
PSEN1-213ENST00000555386 YME1L1Q96TA2 773 aa10.8□□□□□ -0.68
PSEN1-213ENST00000555386 EIF2AQ9BY44 585 aaKnown RBP10.8□□□□□ -0.68
PSEN1-213ENST00000555386 TRIM9Q9C026 710 aa10.8□□□□□ -0.68
PSEN1-213ENST00000555386 TRIM6Q9C030 488 aaPredicted RBP10.8□□□□□ -0.68
PSEN1-213ENST00000555386 HSD3B7Q9H2F3 369 aa10.8□□□□□ -0.68
PSEN1-213ENST00000555386 TSPYL2Q9H2G4 693 aaPredicted RBP10.8□□□□□ -0.68
PSEN1-213ENST00000555386 RGS18Q9NS28 235 aa10.8□□□□□ -0.68
PSEN1-213ENST00000555386 WDR70Q9NW82 654 aa10.8□□□□□ -0.68
PSEN1-213ENST00000555386 MAN1B1Q9UKM7 699 aa10.8□□□□□ -0.68
PSEN1-213ENST00000555386 PCDHB7Q9Y5E2 793 aa10.8□□□□□ -0.68
PSEN1-213ENST00000555386 PHLPP2Q6ZVD8 1323 aa10.79□□□□□ -0.68
PSEN1-213ENST00000555386 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.79□□□□□ -0.68
PSEN1-213ENST00000555386 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.79□□□□□ -0.68
PSEN1-213ENST00000555386 SOX1O00570 391 aaPredicted RBP10.79□□□□□ -0.68
PSEN1-213ENST00000555386 CCP110O43303 1012 aa10.79□□□□□ -0.68
PSEN1-213ENST00000555386 MYBP10242 640 aa10.79□□□□□ -0.68
PSEN1-213ENST00000555386 MAPTP10636 758 aaKnown RBP10.79□□□□□ -0.68
PSEN1-213ENST00000555386 FGFR1P11362 822 aa10.79□□□□□ -0.68
PSEN1-213ENST00000555386 TNNT1P13805 278 aa10.79□□□□□ -0.68
PSEN1-213ENST00000555386 GAP43P17677 238 aa10.79□□□□□ -0.68
PSEN1-213ENST00000555386 HOXA11P31270 313 aaPredicted RBP10.79□□□□□ -0.68
PSEN1-213ENST00000555386 POU5F1BQ06416 359 aa10.79□□□□□ -0.68
PSEN1-213ENST00000555386 COASYQ13057 564 aa10.79□□□□□ -0.68
PSEN1-213ENST00000555386 DSC3Q14574 896 aa10.79□□□□□ -0.68
PSEN1-213ENST00000555386 SYCP1Q15431 976 aa10.79□□□□□ -0.68
PSEN1-213ENST00000555386 RASIP1Q5U651 963 aa10.79□□□□□ -0.68
PSEN1-213ENST00000555386 NOTUMQ6P988 496 aa10.79□□□□□ -0.68
PSEN1-213ENST00000555386 SLC24A5Q71RS6 500 aa10.79□□□□□ -0.68
PSEN1-213ENST00000555386 TAS1R3Q7RTX0 852 aa10.79□□□□□ -0.68
PSEN1-213ENST00000555386 TMC6Q7Z403 805 aa10.79□□□□□ -0.68
PSEN1-213ENST00000555386 SPIRE2Q8WWL2 714 aa10.79□□□□□ -0.68
PSEN1-213ENST00000555386 LRCH3Q96II8 777 aa10.79□□□□□ -0.68
PSEN1-213ENST00000555386 SLC9A7Q96T83 725 aa10.79□□□□□ -0.68
PSEN1-213ENST00000555386 C7orf25Q9BPX7 421 aa10.79□□□□□ -0.68
PSEN1-213ENST00000555386 TCHPQ9BT92 498 aa10.79□□□□□ -0.68
PSEN1-213ENST00000555386 TARS2Q9BW92 718 aaKnown RBP10.79□□□□□ -0.68
PSEN1-213ENST00000555386 NFKBIZQ9BYH8 718 aa10.79□□□□□ -0.68
PSEN1-213ENST00000555386 FGFBP2Q9BYJ0 223 aa10.79□□□□□ -0.68
PSEN1-213ENST00000555386 CCDC113Q9H0I3 377 aa10.79□□□□□ -0.68
PSEN1-213ENST00000555386 NKX2-4Q9H2Z4 354 aa10.79□□□□□ -0.68
PSEN1-213ENST00000555386 FZD8Q9H461 694 aa10.79□□□□□ -0.68
PSEN1-213ENST00000555386 C17orf75Q9HAS0 396 aa10.79□□□□□ -0.68
PSEN1-213ENST00000555386 MAGEF1Q9HAY2 307 aa10.79□□□□□ -0.68
PSEN1-213ENST00000555386 CHD7Q9P2D1 2997 aa10.79□□□□□ -0.68
PSEN1-213ENST00000555386 ARHGAP28Q9P2N2 729 aa10.79□□□□□ -0.68
PSEN1-213ENST00000555386 ANKFY1Q9P2R3 1169 aa10.79□□□□□ -0.68
PSEN1-213ENST00000555386 HES2Q9Y543 173 aa10.79□□□□□ -0.68
PSEN1-213ENST00000555386 FNDC1Q4ZHG4 1894 aaPredicted RBP10.78□□□□□ -0.68
PSEN1-213ENST00000555386 LCHNA4D1U4 455 aa10.78□□□□□ -0.68
PSEN1-213ENST00000555386 C9IYK1 514 aa10.78□□□□□ -0.68
PSEN1-213ENST00000555386 ACKR2O00590 384 aa10.78□□□□□ -0.68
PSEN1-213ENST00000555386 CTIFO43310 598 aaKnown RBP10.78□□□□□ -0.68
PSEN1-213ENST00000555386 SERPINC1P01008 464 aa10.78□□□□□ -0.68
PSEN1-213ENST00000555386 CASP5P51878 434 aa10.78□□□□□ -0.68
PSEN1-213ENST00000555386 ZNF131P52739 623 aa10.78□□□□□ -0.68
PSEN1-213ENST00000555386 NCKAP1LP55160 1127 aa10.78□□□□□ -0.68
PSEN1-213ENST00000555386 UBASH3AP57075 661 aa10.78□□□□□ -0.68
PSEN1-213ENST00000555386 HABP4Q5JVS0 413 aaKnown RBP10.78□□□□□ -0.68
PSEN1-213ENST00000555386 ATF7IP2Q5U623 682 aa10.78□□□□□ -0.68
PSEN1-213ENST00000555386 EEF1DP3Q658K8 133 aa10.78□□□□□ -0.68
PSEN1-213ENST00000555386 NYAP1Q6ZVC0 841 aa10.78□□□□□ -0.68
PSEN1-213ENST00000555386 ECHDC2Q86YB7 292 aa10.78□□□□□ -0.68
PSEN1-213ENST00000555386 CCAR2Q8N163 923 aaKnown RBP10.78□□□□□ -0.68
PSEN1-213ENST00000555386 GLIS3Q8NEA6 775 aa10.78□□□□□ -0.68
PSEN1-213ENST00000555386 TOP1MTQ969P6 601 aa10.78□□□□□ -0.68
PSEN1-213ENST00000555386 ZBTB45Q96K62 511 aaPredicted RBP10.78□□□□□ -0.68
PSEN1-213ENST00000555386 FAM161BQ96MY7 647 aa10.78□□□□□ -0.68
PSEN1-213ENST00000555386 GSDMAQ96QA5 445 aa10.78□□□□□ -0.68
PSEN1-213ENST00000555386 PBX4Q9BYU1 374 aa10.78□□□□□ -0.68
PSEN1-213ENST00000555386 IKZF4Q9H2S9 585 aa10.78□□□□□ -0.68
PSEN1-213ENST00000555386 CERS4Q9HA82 394 aa10.78□□□□□ -0.68
PSEN1-213ENST00000555386 SLC39A2Q9NP94 309 aa10.78□□□□□ -0.68
PSEN1-213ENST00000555386 CHST12Q9NRB3 414 aa10.78□□□□□ -0.68
PSEN1-213ENST00000555386 C1orf112Q9NSG2 853 aa10.78□□□□□ -0.68
PSEN1-213ENST00000555386 FAM105AQ9NUU6 356 aa10.78□□□□□ -0.68
PSEN1-213ENST00000555386 RNF19AQ9NV58 838 aa10.78□□□□□ -0.68
PSEN1-213ENST00000555386 EXOC1Q9NV70 894 aa10.78□□□□□ -0.68
PSEN1-213ENST00000555386 MTUS1Q9ULD2 1270 aa10.78□□□□□ -0.68
PSEN1-213ENST00000555386 TBX20Q9UMR3 447 aa10.78□□□□□ -0.68
PSEN1-213ENST00000555386 INPP5FQ9Y2H2 1132 aa10.78□□□□□ -0.68
PSEN1-213ENST00000555386 PCDHB2Q9Y5E7 798 aa10.78□□□□□ -0.68
PSEN1-213ENST00000555386 CNTNAP2Q9UHC6 1331 aa10.77□□□□□ -0.69
PSEN1-213ENST00000555386 CITO14578 2027 aa10.77□□□□□ -0.69
PSEN1-213ENST00000555386 TBKBP1A7MCY6 615 aa10.77□□□□□ -0.69
PSEN1-213ENST00000555386 MEIS3P2A8K0S8 358 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms