RNA–Protein interactions for RNA: ENST00000555259.5

SCFD1-215, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-215ENST00000555259 NCLP19338 710 aaKnown RBP10.82□□□□□ -0.68
SCFD1-215ENST00000555259 HOXA11P31270 313 aaPredicted RBP10.82□□□□□ -0.68
SCFD1-215ENST00000555259 SFNP31947 248 aa10.82□□□□□ -0.68
SCFD1-215ENST00000555259 CIITAP33076 1130 aa10.82□□□□□ -0.68
SCFD1-215ENST00000555259 NRLP54845 237 aa10.82□□□□□ -0.68
SCFD1-215ENST00000555259 ADCY1Q08828 1119 aa10.82□□□□□ -0.68
SCFD1-215ENST00000555259 XKR3Q5GH77 459 aa10.82□□□□□ -0.68
SCFD1-215ENST00000555259 ZNF852Q6ZMS4 543 aa10.82□□□□□ -0.68
SCFD1-215ENST00000555259 PRR23CQ6ZRP0 262 aa10.82□□□□□ -0.68
SCFD1-215ENST00000555259 ITFG1Q8TB96 612 aa10.82□□□□□ -0.68
SCFD1-215ENST00000555259 DDX1Q92499 740 aaKnown RBP10.82□□□□□ -0.68
SCFD1-215ENST00000555259 GPR62Q9BZJ7 368 aa10.82□□□□□ -0.68
SCFD1-215ENST00000555259 UBN1Q9NPG3 1134 aa10.82□□□□□ -0.68
SCFD1-215ENST00000555259 SH2B1Q9NRF2 756 aaPredicted RBP10.82□□□□□ -0.68
SCFD1-215ENST00000555259 FBXW11Q9UKB1 542 aa10.82□□□□□ -0.68
SCFD1-215ENST00000555259 MRPS17Q9Y2R5 130 aaKnown RBP10.82□□□□□ -0.68
SCFD1-215ENST00000555259 F5P12259 2224 aa10.81□□□□□ -0.68
SCFD1-215ENST00000555259 ARL5CA6NH57 179 aa10.81□□□□□ -0.68
SCFD1-215ENST00000555259 SHISA7A6NL88 538 aa10.81□□□□□ -0.68
SCFD1-215ENST00000555259 MSH4O15457 936 aa10.81□□□□□ -0.68
SCFD1-215ENST00000555259 MAFO75444 373 aaPredicted RBP10.81□□□□□ -0.68
SCFD1-215ENST00000555259 NR1I2O75469 434 aa10.81□□□□□ -0.68
SCFD1-215ENST00000555259 HNRNPA1P09651 372 aaKnown RBP eCLIP10.81□□□□□ -0.68
SCFD1-215ENST00000555259 HOXB3P14651 431 aaPredicted RBP10.81□□□□□ -0.68
SCFD1-215ENST00000555259 MLH1P40692 756 aa10.81□□□□□ -0.68
SCFD1-215ENST00000555259 JAK3P52333 1124 aa10.81□□□□□ -0.68
SCFD1-215ENST00000555259 SHC2P98077 582 aa10.81□□□□□ -0.68
SCFD1-215ENST00000555259 CREMQ03060 361 aa10.81□□□□□ -0.68
SCFD1-215ENST00000555259 CSRP2Q16527 193 aa10.81□□□□□ -0.68
SCFD1-215ENST00000555259 USP41Q3LFD5 358 aa10.81□□□□□ -0.68
SCFD1-215ENST00000555259 TTC22Q5TAA0 569 aa10.81□□□□□ -0.68
SCFD1-215ENST00000555259 FUT10Q6P4F1 479 aa10.81□□□□□ -0.68
SCFD1-215ENST00000555259 APOA5Q6Q788 366 aa10.81□□□□□ -0.68
SCFD1-215ENST00000555259 SYNE3Q6ZMZ3 975 aa10.81□□□□□ -0.68
SCFD1-215ENST00000555259 PRR23BQ6ZRT6 265 aa10.81□□□□□ -0.68
SCFD1-215ENST00000555259 SMG8Q8ND04 991 aaKnown RBP10.81□□□□□ -0.68
SCFD1-215ENST00000555259 EXOC6Q8TAG9 804 aa10.81□□□□□ -0.68
SCFD1-215ENST00000555259 GAD1Q99259 594 aa10.81□□□□□ -0.68
SCFD1-215ENST00000555259 RIT2Q99578 217 aa10.81□□□□□ -0.68
SCFD1-215ENST00000555259 COLEC11Q9BWP8 271 aa10.81□□□□□ -0.68
SCFD1-215ENST00000555259 UNC45AQ9H3U1 944 aa10.81□□□□□ -0.68
SCFD1-215ENST00000555259 MINDY3Q9H8M7 445 aa10.81□□□□□ -0.68
SCFD1-215ENST00000555259 HEBP1Q9NRV9 189 aa10.81□□□□□ -0.68
SCFD1-215ENST00000555259 GAS7O60861 476 aa10.8□□□□□ -0.68
SCFD1-215ENST00000555259 ITGA4P13612 1032 aa10.8□□□□□ -0.68
SCFD1-215ENST00000555259 SCNN1GP51170 649 aa10.8□□□□□ -0.68
SCFD1-215ENST00000555259 ACAP1Q15027 740 aa10.8□□□□□ -0.68
SCFD1-215ENST00000555259 RTN1Q16799 776 aa10.8□□□□□ -0.68
SCFD1-215ENST00000555259 N4BP2L1Q5TBK1 243 aaPredicted RBP10.8□□□□□ -0.68
SCFD1-215ENST00000555259 LIN9Q5TKA1 542 aa10.8□□□□□ -0.68
SCFD1-215ENST00000555259 MAMSTRQ6ZN01 415 aa10.8□□□□□ -0.68
SCFD1-215ENST00000555259 NPAS3Q8IXF0 933 aa10.8□□□□□ -0.68
SCFD1-215ENST00000555259 ZNF687Q8N1G0 1237 aa10.8□□□□□ -0.68
SCFD1-215ENST00000555259 REXO1Q8N1G1 1221 aaKnown RBP10.8□□□□□ -0.68
SCFD1-215ENST00000555259 CNNM3Q8NE01 707 aa10.8□□□□□ -0.68
SCFD1-215ENST00000555259 ZFP42Q96MM3 310 aa10.8□□□□□ -0.68
SCFD1-215ENST00000555259 ZMYND12Q9H0C1 365 aa10.8□□□□□ -0.68
SCFD1-215ENST00000555259 CHRDQ9H2X0 955 aa10.8□□□□□ -0.68
SCFD1-215ENST00000555259 MIOSQ9NXC5 875 aa10.8□□□□□ -0.68
SCFD1-215ENST00000555259 POLIQ9UNA4 740 aa10.8□□□□□ -0.68
SCFD1-215ENST00000555259 IPPQ9Y573 584 aa10.8□□□□□ -0.68
SCFD1-215ENST00000555259 COL4A3BPQ9Y5P4 624 aa10.8□□□□□ -0.68
SCFD1-215ENST00000555259 ESYT2A0FGR8 921 aa10.79□□□□□ -0.68
SCFD1-215ENST00000555259 CCL16O15467 120 aa10.79□□□□□ -0.68
SCFD1-215ENST00000555259 C8AP07357 584 aa10.79□□□□□ -0.68
SCFD1-215ENST00000555259 HOXA9P31269 272 aa10.79□□□□□ -0.68
SCFD1-215ENST00000555259 PPP2R5DQ14738 602 aa10.79□□□□□ -0.68
SCFD1-215ENST00000555259 RTP2Q5QGT7 225 aa10.79□□□□□ -0.68
SCFD1-215ENST00000555259 PPM1LQ5SGD2 360 aa10.79□□□□□ -0.68
SCFD1-215ENST00000555259 LRCH2Q5VUJ6 765 aa10.79□□□□□ -0.68
SCFD1-215ENST00000555259 PRSS55Q6UWB4 352 aaPredicted RBP10.79□□□□□ -0.68
SCFD1-215ENST00000555259 SRGAP1Q7Z6B7 1085 aa10.79□□□□□ -0.68
SCFD1-215ENST00000555259 SLC5A5Q92911 643 aa10.79□□□□□ -0.68
SCFD1-215ENST00000555259 GJA10Q969M2 543 aa10.79□□□□□ -0.68
SCFD1-215ENST00000555259 TEKT3Q9BXF9 490 aa10.79□□□□□ -0.68
SCFD1-215ENST00000555259 ADAM28Q9UKQ2 775 aa10.79□□□□□ -0.68
SCFD1-215ENST00000555259 HES2Q9Y543 173 aa10.79□□□□□ -0.68
SCFD1-215ENST00000555259 LAMA1P25391 3075 aa10.79□□□□□ -0.68
SCFD1-215ENST00000555259 ZBTB43O43298 467 aa10.78□□□□□ -0.68
SCFD1-215ENST00000555259 EDIL3O43854 480 aa10.78□□□□□ -0.68
SCFD1-215ENST00000555259 FOXD2O60548 495 aaPredicted RBP10.78□□□□□ -0.68
SCFD1-215ENST00000555259 XYLBO75191 536 aa10.78□□□□□ -0.68
SCFD1-215ENST00000555259 ECI2O75521 394 aa10.78□□□□□ -0.68
SCFD1-215ENST00000555259 PROS1P07225 676 aa10.78□□□□□ -0.68
SCFD1-215ENST00000555259 SRGAP2CP0DJJ0 459 aa10.78□□□□□ -0.68
SCFD1-215ENST00000555259 CCR3P51677 355 aa10.78□□□□□ -0.68
SCFD1-215ENST00000555259 SIM2Q14190 667 aaPredicted RBP10.78□□□□□ -0.68
SCFD1-215ENST00000555259 PFKFB3Q16875 520 aaPredicted RBP10.78□□□□□ -0.68
SCFD1-215ENST00000555259 IL31Q6EBC2 164 aa10.78□□□□□ -0.68
SCFD1-215ENST00000555259 ANO5Q75V66 913 aa10.78□□□□□ -0.68
SCFD1-215ENST00000555259 MIER3Q7Z3K6 550 aa10.78□□□□□ -0.68
SCFD1-215ENST00000555259 RDM1Q8NG50 284 aa10.78□□□□□ -0.68
SCFD1-215ENST00000555259 CLSTN3Q9BQT9 956 aa10.78□□□□□ -0.68
SCFD1-215ENST00000555259 JPH2Q9BR39 696 aaPredicted RBP10.78□□□□□ -0.68
SCFD1-215ENST00000555259 IER2Q9BTL4 223 aa10.78□□□□□ -0.68
SCFD1-215ENST00000555259 EIF2AQ9BY44 585 aaKnown RBP10.78□□□□□ -0.68
SCFD1-215ENST00000555259 PLA2G2FQ9BZM2 168 aa10.78□□□□□ -0.68
SCFD1-215ENST00000555259 C6orf50Q9HD87 102 aa10.78□□□□□ -0.68
SCFD1-215ENST00000555259 HCFC1R1Q9NWW0 138 aa10.78□□□□□ -0.68
SCFD1-215ENST00000555259 KCNH3Q9ULD8 1083 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms