RNA–Protein interactions for RNA: ENST00000554927.1

TUBB3-207, Transcript of tubulin beta 3 class III, humanhuman

TSL 2

Gene TUBB3, Length 561 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-207ENST00000554927 CD72P21854 359 aa14.78□□□□□ -0.04
TUBB3-207ENST00000554927 USP11P51784 963 aa14.78□□□□□ -0.04
TUBB3-207ENST00000554927 PRKCQQ04759 706 aa14.78□□□□□ -0.04
TUBB3-207ENST00000554927 NTRK3Q16288 839 aa14.78□□□□□ -0.04
TUBB3-207ENST00000554927 MTSS1LQ765P7 747 aa14.78□□□□□ -0.04
TUBB3-207ENST00000554927 GRASPQ7Z6J2 395 aaPredicted RBP14.78□□□□□ -0.04
TUBB3-207ENST00000554927 COLEC11Q9BWP8 271 aa14.78□□□□□ -0.04
TUBB3-207ENST00000554927 EPC1Q9H2F5 836 aa14.78□□□□□ -0.04
TUBB3-207ENST00000554927 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.78□□□□□ -0.04
TUBB3-207ENST00000554927 VPS54Q9P1Q0 977 aa14.78□□□□□ -0.04
TUBB3-207ENST00000554927 CDH7Q9ULB5 785 aa14.78□□□□□ -0.04
TUBB3-207ENST00000554927 POLIQ9UNA4 740 aa14.78□□□□□ -0.04
TUBB3-207ENST00000554927 COL4A3BPQ9Y5P4 624 aa14.78□□□□□ -0.04
TUBB3-207ENST00000554927 FANCMQ8IYD8 2048 aa14.77□□□□□ -0.04
TUBB3-207ENST00000554927 F8W810 466 aa14.77□□□□□ -0.05
TUBB3-207ENST00000554927 ZMYND10O75800 440 aa14.77□□□□□ -0.05
TUBB3-207ENST00000554927 DEXIO95424 95 aa14.77□□□□□ -0.05
TUBB3-207ENST00000554927 XBP1P17861 261 aa14.77□□□□□ -0.05
TUBB3-207ENST00000554927 RPL17P18621 184 aaKnown RBP14.77□□□□□ -0.05
TUBB3-207ENST00000554927 NCLP19338 710 aaKnown RBP14.77□□□□□ -0.05
TUBB3-207ENST00000554927 KCNA4P22459 653 aa14.77□□□□□ -0.05
TUBB3-207ENST00000554927 MLH1P40692 756 aa14.77□□□□□ -0.05
TUBB3-207ENST00000554927 MAGEA9P43362 315 aa14.77□□□□□ -0.05
TUBB3-207ENST00000554927 NTHL1P78549 312 aa14.77□□□□□ -0.05
TUBB3-207ENST00000554927 PFKPQ01813 784 aa14.77□□□□□ -0.05
TUBB3-207ENST00000554927 TOB2Q14106 344 aaPredicted RBP14.77□□□□□ -0.05
TUBB3-207ENST00000554927 USP41Q3LFD5 358 aa14.77□□□□□ -0.05
TUBB3-207ENST00000554927 ZBTB41Q5SVQ8 909 aa14.77□□□□□ -0.05
TUBB3-207ENST00000554927 UBXN11Q5T124 520 aa14.77□□□□□ -0.05
TUBB3-207ENST00000554927 PLA2G4FQ68DD2 849 aa14.77□□□□□ -0.05
TUBB3-207ENST00000554927 TSSK4Q6SA08 328 aa14.77□□□□□ -0.05
TUBB3-207ENST00000554927 FAM177A1Q8N128 213 aaPredicted RBP14.77□□□□□ -0.05
TUBB3-207ENST00000554927 CNNM3Q8NE01 707 aa14.77□□□□□ -0.05
TUBB3-207ENST00000554927 RDM1Q8NG50 284 aa14.77□□□□□ -0.05
TUBB3-207ENST00000554927 SLC5A5Q92911 643 aa14.77□□□□□ -0.05
TUBB3-207ENST00000554927 CEP89Q96ST8 783 aa14.77□□□□□ -0.05
TUBB3-207ENST00000554927 GAD1Q99259 594 aa14.77□□□□□ -0.05
TUBB3-207ENST00000554927 IFT122Q9HBG6 1241 aa14.77□□□□□ -0.05
TUBB3-207ENST00000554927 LTB4R2Q9NPC1 389 aa14.77□□□□□ -0.05
TUBB3-207ENST00000554927 RAB23Q9ULC3 237 aa14.77□□□□□ -0.05
TUBB3-207ENST00000554927 ARL5CA6NH57 179 aa14.76□□□□□ -0.05
TUBB3-207ENST00000554927 TBC1D4O60343 1298 aa14.76□□□□□ -0.05
TUBB3-207ENST00000554927 ERLIN2O94905 339 aa14.76□□□□□ -0.05
TUBB3-207ENST00000554927 ADRB1P08588 477 aa14.76□□□□□ -0.05
TUBB3-207ENST00000554927 SCNN1GP51170 649 aa14.76□□□□□ -0.05
TUBB3-207ENST00000554927 CREMQ03060 361 aa14.76□□□□□ -0.05
TUBB3-207ENST00000554927 STK3Q13188 491 aa14.76□□□□□ -0.05
TUBB3-207ENST00000554927 LIN9Q5TKA1 542 aa14.76□□□□□ -0.05
TUBB3-207ENST00000554927 GALNT17Q6IS24 598 aa14.76□□□□□ -0.05
TUBB3-207ENST00000554927 FUT10Q6P4F1 479 aa14.76□□□□□ -0.05
TUBB3-207ENST00000554927 SRGAP1Q7Z6B7 1085 aa14.76□□□□□ -0.05
TUBB3-207ENST00000554927 RNF168Q8IYW5 571 aaPredicted RBP14.76□□□□□ -0.05
TUBB3-207ENST00000554927 ZBTB44Q8NCP5 570 aa14.76□□□□□ -0.05
TUBB3-207ENST00000554927 SLC7A3Q8WY07 619 aa14.76□□□□□ -0.05
TUBB3-207ENST00000554927 KXD1Q9BQD3 176 aa14.76□□□□□ -0.05
TUBB3-207ENST00000554927 DDX23Q9BUQ8 820 aaKnown RBP14.76□□□□□ -0.05
TUBB3-207ENST00000554927 APOL6Q9BWW8 343 aa14.76□□□□□ -0.05
TUBB3-207ENST00000554927 OSBPL6Q9BZF3 934 aa14.76□□□□□ -0.05
TUBB3-207ENST00000554927 CHST7Q9NS84 486 aa14.76□□□□□ -0.05
TUBB3-207ENST00000554927 PCDHA4Q9UN74 947 aa14.76□□□□□ -0.05
TUBB3-207ENST00000554927 IPPQ9Y573 584 aa14.76□□□□□ -0.05
TUBB3-207ENST00000554927 MAP1BP46821 2468 aaKnown RBP14.76□□□□□ -0.05
TUBB3-207ENST00000554927 NCAM2O15394 837 aa14.75□□□□□ -0.05
TUBB3-207ENST00000554927 STBD1O95210 358 aa14.75□□□□□ -0.05
TUBB3-207ENST00000554927 C1RP00736 705 aa14.75□□□□□ -0.05
TUBB3-207ENST00000554927 HOXA11P31270 313 aaPredicted RBP14.75□□□□□ -0.05
TUBB3-207ENST00000554927 ANKRD1Q15327 319 aa14.75□□□□□ -0.05
TUBB3-207ENST00000554927 LPAL2Q16609 132 aa14.75□□□□□ -0.05
TUBB3-207ENST00000554927 PPM1JQ5JR12 505 aa14.75□□□□□ -0.05
TUBB3-207ENST00000554927 PPM1LQ5SGD2 360 aa14.75□□□□□ -0.05
TUBB3-207ENST00000554927 LILRA6Q6PI73 481 aa14.75□□□□□ -0.05
TUBB3-207ENST00000554927 RSPO2Q6UXX9 243 aaPredicted RBP14.75□□□□□ -0.05
TUBB3-207ENST00000554927 TPRG1Q6ZUI0 275 aa14.75□□□□□ -0.05
TUBB3-207ENST00000554927 SMG8Q8ND04 991 aaKnown RBP14.75□□□□□ -0.05
TUBB3-207ENST00000554927 PRPF31Q8WWY3 499 aaKnown RBP14.75□□□□□ -0.05
TUBB3-207ENST00000554927 PSPC1Q8WXF1 523 aaKnown RBP14.75□□□□□ -0.05
TUBB3-207ENST00000554927 FGF13Q92913 245 aa14.75□□□□□ -0.05
TUBB3-207ENST00000554927 TMEM143Q96AN5 459 aa14.75□□□□□ -0.05
TUBB3-207ENST00000554927 ZFP42Q96MM3 310 aa14.75□□□□□ -0.05
TUBB3-207ENST00000554927 PHF20Q9BVI0 1012 aa14.75□□□□□ -0.05
TUBB3-207ENST00000554927 GPR62Q9BZJ7 368 aa14.75□□□□□ -0.05
TUBB3-207ENST00000554927 SLKQ9H2G2 1235 aaPredicted RBP14.75□□□□□ -0.05
TUBB3-207ENST00000554927 RNF39Q9H2S5 420 aa14.75□□□□□ -0.05
TUBB3-207ENST00000554927 MINDY3Q9H8M7 445 aa14.75□□□□□ -0.05
TUBB3-207ENST00000554927 PARD6AQ9NPB6 346 aa14.75□□□□□ -0.05
TUBB3-207ENST00000554927 BMP2KQ9NSY1 1161 aaPredicted RBP14.75□□□□□ -0.05
TUBB3-207ENST00000554927 FNIP2Q9P278 1114 aa14.75□□□□□ -0.05
TUBB3-207ENST00000554927 HES2Q9Y543 173 aa14.75□□□□□ -0.05
TUBB3-207ENST00000554927 DOCK8Q8NF50 2099 aa14.75□□□□□ -0.05
TUBB3-207ENST00000554927 CHD6Q8TD26 2715 aa14.74□□□□□ -0.05
TUBB3-207ENST00000554927 CCL16O15467 120 aa14.74□□□□□ -0.05
TUBB3-207ENST00000554927 LILRB5O75023 590 aa14.74□□□□□ -0.05
TUBB3-207ENST00000554927 PSMD10O75832 226 aa14.74□□□□□ -0.05
TUBB3-207ENST00000554927 PAPLNO95428 1278 aa14.74□□□□□ -0.05
TUBB3-207ENST00000554927 PSMC5P62195 406 aa14.74□□□□□ -0.05
TUBB3-207ENST00000554927 DSC1Q08554 894 aa14.74□□□□□ -0.05
TUBB3-207ENST00000554927 NCBP1Q09161 790 aaKnown RBP14.74□□□□□ -0.05
TUBB3-207ENST00000554927 SPEM2Q0P670 501 aa14.74□□□□□ -0.05
TUBB3-207ENST00000554927 PRSS55Q6UWB4 352 aaPredicted RBP14.74□□□□□ -0.05
TUBB3-207ENST00000554927 ANO5Q75V66 913 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms