RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 VSTM1Q6UX27 236 aa16.74■□□□□ 0.27
SYNE3-203ENST00000554873 ZDHHC24Q6UX98 284 aa16.74■□□□□ 0.27
SYNE3-203ENST00000554873 LRRC74BQ6ZQY2 392 aa16.74■□□□□ 0.27
SYNE3-203ENST00000554873 SEPT14Q6ZU15 432 aa16.74■□□□□ 0.27
SYNE3-203ENST00000554873 PEX26Q7Z412 305 aa16.74■□□□□ 0.27
SYNE3-203ENST00000554873 LRRC47Q8N1G4 583 aaKnown RBP16.74■□□□□ 0.27
SYNE3-203ENST00000554873 NRG4Q8WWG1 115 aa16.74■□□□□ 0.27
SYNE3-203ENST00000554873 ROPN1BQ9BZX4 212 aaPredicted RBP16.74■□□□□ 0.27
SYNE3-203ENST00000554873 DHX36Q9H2U1 1008 aaKnown RBP16.74■□□□□ 0.27
SYNE3-203ENST00000554873 ROPN1Q9HAT0 212 aaPredicted RBP16.74■□□□□ 0.27
SYNE3-203ENST00000554873 BMP2KQ9NSY1 1161 aaPredicted RBP16.74■□□□□ 0.27
SYNE3-203ENST00000554873 USP40Q9NVE5 1235 aa16.74■□□□□ 0.27
SYNE3-203ENST00000554873 SUCLA2Q9P2R7 463 aaPredicted RBP16.74■□□□□ 0.27
SYNE3-203ENST00000554873 LYNP07948 512 aa16.73■□□□□ 0.27
SYNE3-203ENST00000554873 MAP7Q14244 749 aa16.73■□□□□ 0.27
SYNE3-203ENST00000554873 BARGINQ6ZT62 677 aa16.73■□□□□ 0.27
SYNE3-203ENST00000554873 ZBTB8BQ8NAP8 495 aaPredicted RBP16.73■□□□□ 0.27
SYNE3-203ENST00000554873 UHMK1Q8TAS1 419 aaKnown RBP16.73■□□□□ 0.27
SYNE3-203ENST00000554873 FBXO25Q8TCJ0 367 aa16.73■□□□□ 0.27
SYNE3-203ENST00000554873 SCFD1Q8WVM8 642 aa16.73■□□□□ 0.27
SYNE3-203ENST00000554873 OLFM3Q96PB7 478 aa16.73■□□□□ 0.27
SYNE3-203ENST00000554873 LRRC37BQ96QE4 947 aa16.73■□□□□ 0.27
SYNE3-203ENST00000554873 GANQ9H2C0 597 aa16.73■□□□□ 0.27
SYNE3-203ENST00000554873 KCTD10Q9H3F6 313 aa16.73■□□□□ 0.27
SYNE3-203ENST00000554873 MTMR4Q9NYA4 1195 aa16.73■□□□□ 0.27
SYNE3-203ENST00000554873 PCDHA12Q9UN75 941 aa16.73■□□□□ 0.27
SYNE3-203ENST00000554873 MARCH6O60337 910 aa16.73■□□□□ 0.27
SYNE3-203ENST00000554873 PPP1R11O60927 126 aaPredicted RBP16.73■□□□□ 0.27
SYNE3-203ENST00000554873 RPS6KA4O75676 772 aa16.73■□□□□ 0.27
SYNE3-203ENST00000554873 EIF6P56537 245 aaKnown RBP16.73■□□□□ 0.27
SYNE3-203ENST00000554873 CBX3Q13185 183 aa16.73■□□□□ 0.27
SYNE3-203ENST00000554873 ASIC2Q16515 512 aa16.73■□□□□ 0.27
SYNE3-203ENST00000554873 PTPROQ16827 1216 aa16.73■□□□□ 0.27
SYNE3-203ENST00000554873 HERC4Q5GLZ8 1057 aaPredicted RBP16.73■□□□□ 0.27
SYNE3-203ENST00000554873 PTF1AQ7RTS3 328 aa16.73■□□□□ 0.27
SYNE3-203ENST00000554873 ANKRD42Q8N9B4 389 aa16.73■□□□□ 0.27
SYNE3-203ENST00000554873 ARHGEF2Q92974 986 aaKnown RBP16.73■□□□□ 0.27
SYNE3-203ENST00000554873 LENG1Q96BZ8 264 aaPredicted RBP16.73■□□□□ 0.27
SYNE3-203ENST00000554873 TTC7AQ9ULT0 858 aaPredicted RBP16.73■□□□□ 0.27
SYNE3-203ENST00000554873 KIAA1024Q9UPX6 916 aa16.73■□□□□ 0.27
SYNE3-203ENST00000554873 CDK5RAP2Q96SN8 1893 aa16.72■□□□□ 0.27
SYNE3-203ENST00000554873 SPATA31D3P0C874 917 aa16.72■□□□□ 0.27
SYNE3-203ENST00000554873 SLC34A1Q06495 639 aa16.72■□□□□ 0.27
SYNE3-203ENST00000554873 AP1B1Q10567 949 aa16.72■□□□□ 0.27
SYNE3-203ENST00000554873 RCN1Q15293 331 aa16.72■□□□□ 0.27
SYNE3-203ENST00000554873 SPATA31D4Q6ZUB0 917 aa16.72■□□□□ 0.27
SYNE3-203ENST00000554873 CLEC10AQ8IUN9 316 aa16.72■□□□□ 0.27
SYNE3-203ENST00000554873 GDAP1Q8TB36 358 aa16.72■□□□□ 0.27
SYNE3-203ENST00000554873 MAGEB18Q96M61 343 aa16.72■□□□□ 0.27
SYNE3-203ENST00000554873 TLE6Q9H808 572 aa16.72■□□□□ 0.27
SYNE3-203ENST00000554873 JMJD4Q9H9V9 463 aa16.72■□□□□ 0.27
SYNE3-203ENST00000554873 IL1RAPL1Q9NZN1 696 aa16.72■□□□□ 0.27
SYNE3-203ENST00000554873 RIPK2O43353 540 aa16.72■□□□□ 0.27
SYNE3-203ENST00000554873 ITGA2BP08514 1039 aa16.72■□□□□ 0.27
SYNE3-203ENST00000554873 VIL1P09327 827 aaKnown RBP16.72■□□□□ 0.27
SYNE3-203ENST00000554873 UBTFL6P0CB48 400 aaPredicted RBP16.72■□□□□ 0.27
SYNE3-203ENST00000554873 CCNFP41002 786 aa16.72■□□□□ 0.27
SYNE3-203ENST00000554873 KCNH2Q12809 1159 aa16.72■□□□□ 0.27
SYNE3-203ENST00000554873 GRAPQ13588 217 aa16.72■□□□□ 0.27
SYNE3-203ENST00000554873 ASPRV1Q53RT3 343 aa16.72■□□□□ 0.27
SYNE3-203ENST00000554873 KIAA1755Q5JYT7 1200 aa16.72■□□□□ 0.27
SYNE3-203ENST00000554873 C4orf50Q6ZRC1 276 aa16.72■□□□□ 0.27
SYNE3-203ENST00000554873 CCDC65Q8IXS2 484 aa16.72■□□□□ 0.27
SYNE3-203ENST00000554873 SMYD1Q8NB12 490 aa16.72■□□□□ 0.27
SYNE3-203ENST00000554873 TPCN2Q8NHX9 752 aa16.72■□□□□ 0.27
SYNE3-203ENST00000554873 GRAPLQ8TC17 118 aaPredicted RBP16.72■□□□□ 0.27
SYNE3-203ENST00000554873 CD209Q9NNX6 404 aa16.72■□□□□ 0.27
SYNE3-203ENST00000554873 EMILIN3Q9NT22 766 aa16.72■□□□□ 0.27
SYNE3-203ENST00000554873 ETNK2Q9NVF9 386 aa16.72■□□□□ 0.27
SYNE3-203ENST00000554873 STXBP5LQ9Y2K9 1186 aa16.72■□□□□ 0.27
SYNE3-203ENST00000554873 PITPNM2Q9BZ72 1349 aa16.72■□□□□ 0.27
SYNE3-203ENST00000554873 MAPK13O15264 365 aa16.71■□□□□ 0.27
SYNE3-203ENST00000554873 MAP3K7O43318 606 aa16.71■□□□□ 0.27
SYNE3-203ENST00000554873 PLA2G4BP0C869 781 aa16.71■□□□□ 0.27
SYNE3-203ENST00000554873 ACTN1P12814 892 aa16.71■□□□□ 0.27
SYNE3-203ENST00000554873 ATP5DP30049 168 aa16.71■□□□□ 0.27
SYNE3-203ENST00000554873 STX2P32856 288 aa16.71■□□□□ 0.27
SYNE3-203ENST00000554873 CLK2P49760 499 aaKnown RBP16.71■□□□□ 0.27
SYNE3-203ENST00000554873 RTP1P59025 263 aa16.71■□□□□ 0.27
SYNE3-203ENST00000554873 PTK2Q05397 1052 aa16.71■□□□□ 0.27
SYNE3-203ENST00000554873 HYIQ5T013 277 aa16.71■□□□□ 0.27
SYNE3-203ENST00000554873 IRF2BP2Q7Z5L9 587 aa16.71■□□□□ 0.27
SYNE3-203ENST00000554873 AMIGO3Q86WK7 504 aa16.71■□□□□ 0.27
SYNE3-203ENST00000554873 DNAAF5Q86Y56 855 aa16.71■□□□□ 0.27
SYNE3-203ENST00000554873 METTL14Q9HCE5 456 aaKnown RBP16.71■□□□□ 0.27
SYNE3-203ENST00000554873 MLXIPLQ9NP71 852 aa16.71■□□□□ 0.27
SYNE3-203ENST00000554873 DDX43Q9NXZ2 648 aaKnown RBP16.71■□□□□ 0.27
SYNE3-203ENST00000554873 HSFX1Q9UBD0 423 aa16.71■□□□□ 0.27
SYNE3-203ENST00000554873 MTRF1LQ9UGC7 380 aaKnown RBP16.71■□□□□ 0.27
SYNE3-203ENST00000554873 PAIP2BQ9ULR5 123 aaKnown RBP16.71■□□□□ 0.27
SYNE3-203ENST00000554873 CHKBQ9Y259 395 aa16.71■□□□□ 0.27
SYNE3-203ENST00000554873 SNX24Q9Y343 169 aa16.71■□□□□ 0.27
SYNE3-203ENST00000554873 USH1CQ9Y6N9 552 aa16.71■□□□□ 0.27
SYNE3-203ENST00000554873 SPATA31A5Q5VU36 1347 aa16.71■□□□□ 0.27
SYNE3-203ENST00000554873 SPATA31A7Q8IWB4 1347 aa16.71■□□□□ 0.27
SYNE3-203ENST00000554873 PASKQ96RG2 1323 aa16.71■□□□□ 0.27
SYNE3-203ENST00000554873 SBF2Q86WG5 1849 aa16.71■□□□□ 0.27
SYNE3-203ENST00000554873 PNMA6FA0A0J9YX94 578 aa16.71■□□□□ 0.27
SYNE3-203ENST00000554873 FGGP02679 453 aa16.71■□□□□ 0.27
SYNE3-203ENST00000554873 T-ENOLP0DO92 83 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms