RNA–Protein interactions for RNA: ENST00000554819.5

SCFD1-214, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-214ENST00000554819 PTPN21Q16825 1174 aa5.37□□□□□ -1.55
SCFD1-214ENST00000554819 ZXDCQ2QGD7 858 aaPredicted RBP5.37□□□□□ -1.55
SCFD1-214ENST00000554819 BRDTQ58F21 947 aaPredicted RBP5.37□□□□□ -1.55
SCFD1-214ENST00000554819 DBX2Q6ZNG2 339 aa5.37□□□□□ -1.55
SCFD1-214ENST00000554819 DOK3Q7L591 496 aa5.37□□□□□ -1.55
SCFD1-214ENST00000554819 PNMA8AQ86V59 439 aaPredicted RBP5.37□□□□□ -1.55
SCFD1-214ENST00000554819 ELOA2Q8IYF1 753 aaPredicted RBP5.37□□□□□ -1.55
SCFD1-214ENST00000554819 RPUSD2Q8IZ73 545 aaKnown RBP5.37□□□□□ -1.55
SCFD1-214ENST00000554819 OR7D4Q8NG98 312 aa5.37□□□□□ -1.55
SCFD1-214ENST00000554819 SLC2A13Q96QE2 648 aa5.37□□□□□ -1.55
SCFD1-214ENST00000554819 UHRF1Q96T88 793 aaPredicted RBP5.37□□□□□ -1.55
SCFD1-214ENST00000554819 CPPED1Q9BRF8 314 aaPredicted RBP5.37□□□□□ -1.55
SCFD1-214ENST00000554819 ASPSCR1Q9BZE9 553 aa5.37□□□□□ -1.55
SCFD1-214ENST00000554819 TRPS1Q9UHF7 1281 aa5.37□□□□□ -1.55
SCFD1-214ENST00000554819 DNM3Q9UQ16 869 aa5.37□□□□□ -1.55
SCFD1-214ENST00000554819 KRTAP23-1A1A580 65 aa5.36□□□□□ -1.55
SCFD1-214ENST00000554819 GOLGA6L6A8MZA4 724 aa5.36□□□□□ -1.55
SCFD1-214ENST00000554819 STC2O76061 302 aa5.36□□□□□ -1.55
SCFD1-214ENST00000554819 PTPN7P35236 360 aa5.36□□□□□ -1.55
SCFD1-214ENST00000554819 MAN2A2P49641 1150 aa5.36□□□□□ -1.55
SCFD1-214ENST00000554819 SLC16A1P53985 500 aa5.36□□□□□ -1.55
SCFD1-214ENST00000554819 PPP3CAQ08209 521 aa5.36□□□□□ -1.55
SCFD1-214ENST00000554819 MGAT2Q10469 447 aa5.36□□□□□ -1.55
SCFD1-214ENST00000554819 CNGB1Q14028 1251 aaPredicted RBP5.36□□□□□ -1.55
SCFD1-214ENST00000554819 SPDYAQ5MJ70 313 aa5.36□□□□□ -1.55
SCFD1-214ENST00000554819 LILRA3Q8N6C8 439 aaPredicted RBP5.36□□□□□ -1.55
SCFD1-214ENST00000554819 SH3RF3Q8TEJ3 882 aaPredicted RBP5.36□□□□□ -1.55
SCFD1-214ENST00000554819 ATXN2LQ8WWM7 1075 aaKnown RBP5.36□□□□□ -1.55
SCFD1-214ENST00000554819 JADE3Q92613 823 aa5.36□□□□□ -1.55
SCFD1-214ENST00000554819 CEP89Q96ST8 783 aa5.36□□□□□ -1.55
SCFD1-214ENST00000554819 GPR87Q9BY21 358 aa5.36□□□□□ -1.55
SCFD1-214ENST00000554819 KRTAP17-1Q9BYP8 105 aa5.36□□□□□ -1.55
SCFD1-214ENST00000554819 ZMYM3Q14202 1370 aa5.35□□□□□ -1.55
SCFD1-214ENST00000554819 TNKSO95271 1327 aa5.35□□□□□ -1.55
SCFD1-214ENST00000554819 B5MCH6 92 aa5.35□□□□□ -1.55
SCFD1-214ENST00000554819 NDUFS2O75306 463 aa5.35□□□□□ -1.55
SCFD1-214ENST00000554819 INSRRP14616 1297 aa5.35□□□□□ -1.55
SCFD1-214ENST00000554819 WASP42768 502 aa5.35□□□□□ -1.55
SCFD1-214ENST00000554819 FLT3LGP49771 235 aa5.35□□□□□ -1.55
SCFD1-214ENST00000554819 PTH1RQ03431 593 aa5.35□□□□□ -1.55
SCFD1-214ENST00000554819 PCBP2Q15366 365 aaKnown RBP eCLIP5.35□□□□□ -1.55
SCFD1-214ENST00000554819 FAM214AQ32MH5 1076 aa5.35□□□□□ -1.55
SCFD1-214ENST00000554819 NRN1LQ496H8 165 aa5.35□□□□□ -1.55
SCFD1-214ENST00000554819 USP39Q53GS9 565 aaKnown RBP5.35□□□□□ -1.55
SCFD1-214ENST00000554819 DCAF17Q5H9S7 520 aaPredicted RBP5.35□□□□□ -1.55
SCFD1-214ENST00000554819 FAM47AQ5JRC9 791 aa5.35□□□□□ -1.55
SCFD1-214ENST00000554819 PRAMEF14Q5SWL7 426 aa5.35□□□□□ -1.55
SCFD1-214ENST00000554819 EFCAB2Q5VUJ9 269 aa5.35□□□□□ -1.55
SCFD1-214ENST00000554819 Q6ZVL8 140 aa5.35□□□□□ -1.55
SCFD1-214ENST00000554819 C1orf210Q8IVY1 113 aa5.35□□□□□ -1.55
SCFD1-214ENST00000554819 PQLC1Q8N2U9 271 aa5.35□□□□□ -1.55
SCFD1-214ENST00000554819 PPM1NQ8N819 430 aa5.35□□□□□ -1.55
SCFD1-214ENST00000554819 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.35□□□□□ -1.55
SCFD1-214ENST00000554819 MDM1Q8TC05 714 aa5.35□□□□□ -1.55
SCFD1-214ENST00000554819 CYFIP2Q96F07 1278 aa5.35□□□□□ -1.55
SCFD1-214ENST00000554819 MNTQ99583 582 aa5.35□□□□□ -1.55
SCFD1-214ENST00000554819 SMAD5Q99717 465 aaKnown RBP5.35□□□□□ -1.55
SCFD1-214ENST00000554819 DMRT3Q9NQL9 472 aa5.35□□□□□ -1.55
SCFD1-214ENST00000554819 XDHP47989 1333 aa5.34□□□□□ -1.55
SCFD1-214ENST00000554819 PRR5-ARHGAP8B1AHC4 643 aa5.34□□□□□ -1.55
SCFD1-214ENST00000554819 FZD9O00144 591 aa5.34□□□□□ -1.55
SCFD1-214ENST00000554819 PCDHGA12O60330 932 aa5.34□□□□□ -1.55
SCFD1-214ENST00000554819 SNUPNO95149 360 aaKnown RBP5.34□□□□□ -1.55
SCFD1-214ENST00000554819 IL2RBP14784 551 aa5.34□□□□□ -1.55
SCFD1-214ENST00000554819 SREBF1P36956 1147 aa5.34□□□□□ -1.55
SCFD1-214ENST00000554819 RABGGTBP53611 331 aa5.34□□□□□ -1.55
SCFD1-214ENST00000554819 SP140Q13342 867 aa5.34□□□□□ -1.55
SCFD1-214ENST00000554819 RRP1BQ14684 758 aaKnown RBP5.34□□□□□ -1.55
SCFD1-214ENST00000554819 NAIF1Q69YI7 327 aaPredicted RBP5.34□□□□□ -1.55
SCFD1-214ENST00000554819 HTR3DQ70Z44 454 aa5.34□□□□□ -1.55
SCFD1-214ENST00000554819 TMPRSS6Q8IU80 811 aa5.34□□□□□ -1.55
SCFD1-214ENST00000554819 MB21D1Q8N884 522 aa5.34□□□□□ -1.55
SCFD1-214ENST00000554819 EXTL1Q92935 676 aa5.34□□□□□ -1.55
SCFD1-214ENST00000554819 C7orf25Q9BPX7 421 aa5.34□□□□□ -1.55
SCFD1-214ENST00000554819 SENP6Q9GZR1 1112 aaPredicted RBP5.34□□□□□ -1.55
SCFD1-214ENST00000554819 MANSC1Q9H8J5 431 aa5.34□□□□□ -1.55
SCFD1-214ENST00000554819 LANCL2Q9NS86 450 aa5.34□□□□□ -1.55
SCFD1-214ENST00000554819 TMEM140Q9NV12 185 aa5.34□□□□□ -1.55
SCFD1-214ENST00000554819 DDX56Q9NY93 547 aaKnown RBP5.34□□□□□ -1.55
SCFD1-214ENST00000554819 MOCS1Q9NZB8 636 aa5.34□□□□□ -1.55
SCFD1-214ENST00000554819 INTUQ9ULD6 942 aa5.34□□□□□ -1.55
SCFD1-214ENST00000554819 PCDHGA9Q9Y5G4 932 aaKnown RBP5.34□□□□□ -1.55
SCFD1-214ENST00000554819 PCDHGA8Q9Y5G5 932 aa5.34□□□□□ -1.55
SCFD1-214ENST00000554819 PCDHGA7Q9Y5G6 932 aa5.34□□□□□ -1.55
SCFD1-214ENST00000554819 PCDHGA6Q9Y5G7 932 aa5.34□□□□□ -1.55
SCFD1-214ENST00000554819 PCDHGA3Q9Y5H0 932 aa5.34□□□□□ -1.55
SCFD1-214ENST00000554819 TBKBP1A7MCY6 615 aa5.33□□□□□ -1.56
SCFD1-214ENST00000554819 HK1P19367 917 aa5.33□□□□□ -1.56
SCFD1-214ENST00000554819 C5AR1P21730 350 aa5.33□□□□□ -1.56
SCFD1-214ENST00000554819 MGAT1P26572 445 aa5.33□□□□□ -1.56
SCFD1-214ENST00000554819 RECQLP46063 649 aaPredicted RBP5.33□□□□□ -1.56
SCFD1-214ENST00000554819 SCNN1GP51170 649 aa5.33□□□□□ -1.56
SCFD1-214ENST00000554819 RNF207Q6ZRF8 634 aa5.33□□□□□ -1.56
SCFD1-214ENST00000554819 Q6ZRM9 215 aa5.33□□□□□ -1.56
SCFD1-214ENST00000554819 MIGA2Q7L4E1 593 aa5.33□□□□□ -1.56
SCFD1-214ENST00000554819 ZNF572Q7Z3I7 529 aaPredicted RBP5.33□□□□□ -1.56
SCFD1-214ENST00000554819 SPRED1Q7Z699 444 aa5.33□□□□□ -1.56
SCFD1-214ENST00000554819 ZBTB46Q86UZ6 589 aa5.33□□□□□ -1.56
SCFD1-214ENST00000554819 TRMT2AQ8IZ69 625 aaKnown RBP5.33□□□□□ -1.56
SCFD1-214ENST00000554819 NRG4Q8WWG1 115 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms