RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 CFBP00751 764 aa2.03□□□□□ -2.08
PRPF39-208ENST00000554785 MYBL2P10244 700 aa2.03□□□□□ -2.08
PRPF39-208ENST00000554785 SCNN1GP51170 649 aa2.03□□□□□ -2.08
PRPF39-208ENST00000554785 BPIFB4P59827 614 aa2.03□□□□□ -2.08
PRPF39-208ENST00000554785 ROM1Q03395 351 aa2.03□□□□□ -2.08
PRPF39-208ENST00000554785 PDCD1Q15116 288 aa2.03□□□□□ -2.08
PRPF39-208ENST00000554785 TTF1Q15361 905 aaPredicted RBP2.03□□□□□ -2.08
PRPF39-208ENST00000554785 INAVAQ3KP66 663 aa2.03□□□□□ -2.08
PRPF39-208ENST00000554785 C1QL3Q5VWW1 255 aa2.03□□□□□ -2.08
PRPF39-208ENST00000554785 KLHDC10Q6PID8 442 aa2.03□□□□□ -2.08
PRPF39-208ENST00000554785 ZNF627Q7L945 461 aa2.03□□□□□ -2.08
PRPF39-208ENST00000554785 KANSL1Q7Z3B3 1105 aa2.03□□□□□ -2.08
PRPF39-208ENST00000554785 CXorf67Q86X51 503 aaPredicted RBP2.03□□□□□ -2.08
PRPF39-208ENST00000554785 CMIPQ8IY22 773 aa2.03□□□□□ -2.08
PRPF39-208ENST00000554785 CBARPQ8N350 705 aaPredicted RBP2.03□□□□□ -2.08
PRPF39-208ENST00000554785 LMBR1Q8WVP7 490 aa2.03□□□□□ -2.08
PRPF39-208ENST00000554785 JDP2Q8WYK2 163 aa2.03□□□□□ -2.08
PRPF39-208ENST00000554785 FAM89AQ96GI7 184 aa2.03□□□□□ -2.08
PRPF39-208ENST00000554785 DYDC2Q96IM9 177 aa2.03□□□□□ -2.08
PRPF39-208ENST00000554785 ACAP3Q96P50 834 aa2.03□□□□□ -2.08
PRPF39-208ENST00000554785 MYL10Q9BUA6 226 aa2.03□□□□□ -2.08
PRPF39-208ENST00000554785 ANO3Q9BYT9 981 aa2.03□□□□□ -2.08
PRPF39-208ENST00000554785 SLC6A15Q9H2J7 730 aa2.03□□□□□ -2.08
PRPF39-208ENST00000554785 NELFAQ9H3P2 528 aa2.03□□□□□ -2.08
PRPF39-208ENST00000554785 MMRN2Q9H8L6 949 aa2.03□□□□□ -2.08
PRPF39-208ENST00000554785 THRAP3Q9Y2W1 955 aaKnown RBP2.03□□□□□ -2.08
PRPF39-208ENST00000554785 TNKSO95271 1327 aa2.03□□□□□ -2.09
PRPF39-208ENST00000554785 FRMPD1Q5SYB0 1578 aa2.03□□□□□ -2.09
PRPF39-208ENST00000554785 UACAQ9BZF9 1416 aa2.02□□□□□ -2.09
PRPF39-208ENST00000554785 SHTN1A0MZ66 631 aa2.02□□□□□ -2.09
PRPF39-208ENST00000554785 PRSS38A1L453 326 aa2.02□□□□□ -2.09
PRPF39-208ENST00000554785 PMS2P1A4D2B8 440 aa2.02□□□□□ -2.09
PRPF39-208ENST00000554785 CAPN14A8MX76 684 aa2.02□□□□□ -2.09
PRPF39-208ENST00000554785 MT-CO1P00395 513 aa2.02□□□□□ -2.09
PRPF39-208ENST00000554785 KRT4P19013 534 aa2.02□□□□□ -2.09
PRPF39-208ENST00000554785 CCND1P24385 295 aa2.02□□□□□ -2.09
PRPF39-208ENST00000554785 HSPA1LP34931 641 aa2.02□□□□□ -2.09
PRPF39-208ENST00000554785 IARSP41252 1262 aaKnown RBP2.02□□□□□ -2.09
PRPF39-208ENST00000554785 GPR3P46089 330 aa2.02□□□□□ -2.09
PRPF39-208ENST00000554785 NEK2P51955 445 aa2.02□□□□□ -2.09
PRPF39-208ENST00000554785 EPHB1P54762 984 aa2.02□□□□□ -2.09
PRPF39-208ENST00000554785 ADCY2Q08462 1091 aa2.02□□□□□ -2.09
PRPF39-208ENST00000554785 MAP3K12Q12852 859 aa2.02□□□□□ -2.09
PRPF39-208ENST00000554785 DGKDQ16760 1214 aa2.02□□□□□ -2.09
PRPF39-208ENST00000554785 PTPN21Q16825 1174 aa2.02□□□□□ -2.09
PRPF39-208ENST00000554785 UGT8Q16880 541 aa2.02□□□□□ -2.09
PRPF39-208ENST00000554785 ABCB5Q2M3G0 1257 aa2.02□□□□□ -2.09
PRPF39-208ENST00000554785 KIAA1841Q6NSI8 718 aa2.02□□□□□ -2.09
PRPF39-208ENST00000554785 PGM2L1Q6PCE3 622 aa2.02□□□□□ -2.09
PRPF39-208ENST00000554785 Q6ZPA2 131 aa2.02□□□□□ -2.09
PRPF39-208ENST00000554785 ZBTB46Q86UZ6 589 aa2.02□□□□□ -2.09
PRPF39-208ENST00000554785 TMPRSS6Q8IU80 811 aa2.02□□□□□ -2.09
PRPF39-208ENST00000554785 AMOTL1Q8IY63 956 aa2.02□□□□□ -2.09
PRPF39-208ENST00000554785 ELOA2Q8IYF1 753 aaPredicted RBP2.02□□□□□ -2.09
PRPF39-208ENST00000554785 C1orf162Q8NEQ5 155 aaPredicted RBP2.02□□□□□ -2.09
PRPF39-208ENST00000554785 LARP4BQ92615 738 aaKnown RBP2.02□□□□□ -2.09
PRPF39-208ENST00000554785 RPGRQ92834 1020 aaKnown RBP2.02□□□□□ -2.09
PRPF39-208ENST00000554785 GCDHQ92947 438 aaPredicted RBP2.02□□□□□ -2.09
PRPF39-208ENST00000554785 FERMT2Q96AC1 680 aa2.02□□□□□ -2.09
PRPF39-208ENST00000554785 CHMP4CQ96CF2 233 aa2.02□□□□□ -2.09
PRPF39-208ENST00000554785 PGBD4Q96DM1 585 aa2.02□□□□□ -2.09
PRPF39-208ENST00000554785 CHFRQ96EP1 664 aa2.02□□□□□ -2.09
PRPF39-208ENST00000554785 FUBP3Q96I24 572 aaKnown RBP eCLIP2.02□□□□□ -2.09
PRPF39-208ENST00000554785 FAXDC2Q96IV6 333 aa2.02□□□□□ -2.09
PRPF39-208ENST00000554785 WDR92Q96MX6 357 aa2.02□□□□□ -2.09
PRPF39-208ENST00000554785 IKZF4Q9H2S9 585 aa2.02□□□□□ -2.09
PRPF39-208ENST00000554785 MTG2Q9H4K7 406 aa2.02□□□□□ -2.09
PRPF39-208ENST00000554785 ZNF703Q9H7S9 590 aaPredicted RBP2.02□□□□□ -2.09
PRPF39-208ENST00000554785 IL23AQ9NPF7 189 aa2.02□□□□□ -2.09
PRPF39-208ENST00000554785 AASDHPPTQ9NRN7 309 aa2.02□□□□□ -2.09
PRPF39-208ENST00000554785 KCMF1Q9P0J7 381 aa2.02□□□□□ -2.09
PRPF39-208ENST00000554785 TCEAL9Q9UHQ7 104 aa2.02□□□□□ -2.09
PRPF39-208ENST00000554785 KIAA0556O60303 1618 aa2.02□□□□□ -2.09
PRPF39-208ENST00000554785 TNIKQ9UKE5 1360 aa2.02□□□□□ -2.09
PRPF39-208ENST00000554785 POLR2AP24928 1970 aaKnown RBP2.02□□□□□ -2.09
PRPF39-208ENST00000554785 ARHGEF40Q8TER5 1519 aa2.02□□□□□ -2.09
PRPF39-208ENST00000554785 KIAA0586Q9BVV6 1533 aa2.02□□□□□ -2.09
PRPF39-208ENST00000554785 KRTAP23-1A1A580 65 aa2.02□□□□□ -2.09
PRPF39-208ENST00000554785 MAFGO15525 162 aa2.02□□□□□ -2.09
PRPF39-208ENST00000554785 OPHN1O60890 802 aa2.02□□□□□ -2.09
PRPF39-208ENST00000554785 H2AFYO75367 372 aaKnown RBP2.02□□□□□ -2.09
PRPF39-208ENST00000554785 KRTAP5-8O75690 187 aa2.02□□□□□ -2.09
PRPF39-208ENST00000554785 CLEC2LP0C7M8 214 aa2.02□□□□□ -2.09
PRPF39-208ENST00000554785 RBP3P10745 1247 aa2.02□□□□□ -2.09
PRPF39-208ENST00000554785 ENPP1P22413 925 aa2.02□□□□□ -2.09
PRPF39-208ENST00000554785 TGM1P22735 817 aa2.02□□□□□ -2.09
PRPF39-208ENST00000554785 RABGGTBP53611 331 aa2.02□□□□□ -2.09
PRPF39-208ENST00000554785 MANFP55145 182 aaKnown RBP2.02□□□□□ -2.09
PRPF39-208ENST00000554785 BCAR1P56945 870 aa2.02□□□□□ -2.09
PRPF39-208ENST00000554785 MCL1Q07820 350 aa2.02□□□□□ -2.09
PRPF39-208ENST00000554785 TUBA3CQ13748 450 aa2.02□□□□□ -2.09
PRPF39-208ENST00000554785 PCBP2Q15366 365 aaKnown RBP eCLIP2.02□□□□□ -2.09
PRPF39-208ENST00000554785 FSCN1Q16658 493 aaKnown RBP2.02□□□□□ -2.09
PRPF39-208ENST00000554785 CT83Q5H943 113 aa2.02□□□□□ -2.09
PRPF39-208ENST00000554785 ZBTB41Q5SVQ8 909 aa2.02□□□□□ -2.09
PRPF39-208ENST00000554785 CCDC62Q6P9F0 684 aa2.02□□□□□ -2.09
PRPF39-208ENST00000554785 TUBA3EQ6PEY2 450 aa2.02□□□□□ -2.09
PRPF39-208ENST00000554785 FAM111BQ6SJ93 734 aa2.02□□□□□ -2.09
PRPF39-208ENST00000554785 PLA2G15Q8NCC3 412 aa2.02□□□□□ -2.09
PRPF39-208ENST00000554785 TGFBRAP1Q8WUH2 860 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms