RNA–Protein interactions for RNA: ENST00000554731.1

RDH11-207, Transcript of retinol dehydrogenase 11, humanhuman

TSL 3

Gene RDH11, Length 888 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-207ENST00000554731 ANKEF1Q9NU02 776 aa13.87□□□□□ -0.19
RDH11-207ENST00000554731 MIOSQ9NXC5 875 aa13.87□□□□□ -0.19
RDH11-207ENST00000554731 TPCN1Q9ULQ1 816 aa13.87□□□□□ -0.19
RDH11-207ENST00000554731 PCDHA12Q9UN75 941 aa13.87□□□□□ -0.19
RDH11-207ENST00000554731 CLUHO75153 1309 aa13.87□□□□□ -0.19
RDH11-207ENST00000554731 C2orf16Q68DN1 1984 aa13.86□□□□□ -0.19
RDH11-207ENST00000554731 F8W810 466 aa13.86□□□□□ -0.19
RDH11-207ENST00000554731 DTNBO60941 627 aa13.86□□□□□ -0.19
RDH11-207ENST00000554731 RFPL2O75678 378 aa13.86□□□□□ -0.19
RDH11-207ENST00000554731 MYBP10242 640 aa13.86□□□□□ -0.19
RDH11-207ENST00000554731 NPR3P17342 541 aa13.86□□□□□ -0.19
RDH11-207ENST00000554731 ARF4P18085 180 aaPredicted RBP13.86□□□□□ -0.19
RDH11-207ENST00000554731 ARL2P36404 184 aa13.86□□□□□ -0.19
RDH11-207ENST00000554731 NR5A1Q13285 461 aa13.86□□□□□ -0.19
RDH11-207ENST00000554731 CAPSQ13938 189 aa13.86□□□□□ -0.19
RDH11-207ENST00000554731 CALCRLQ16602 461 aa13.86□□□□□ -0.19
RDH11-207ENST00000554731 AMHR2Q16671 573 aa13.86□□□□□ -0.19
RDH11-207ENST00000554731 FRMD5Q7Z6J6 570 aa13.86□□□□□ -0.19
RDH11-207ENST00000554731 CCDC105Q8IYK2 499 aa13.86□□□□□ -0.19
RDH11-207ENST00000554731 GPR65Q8IYL9 337 aa13.86□□□□□ -0.19
RDH11-207ENST00000554731 NKD2Q969F2 451 aaPredicted RBP13.86□□□□□ -0.19
RDH11-207ENST00000554731 HSD17B14Q9BPX1 270 aa13.86□□□□□ -0.19
RDH11-207ENST00000554731 NFKBIZQ9BYH8 718 aa13.86□□□□□ -0.19
RDH11-207ENST00000554731 PLEKHA4Q9H4M7 779 aa13.86□□□□□ -0.19
RDH11-207ENST00000554731 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.86□□□□□ -0.19
RDH11-207ENST00000554731 CHST7Q9NS84 486 aa13.86□□□□□ -0.19
RDH11-207ENST00000554731 EPS15L1Q9UBC2 864 aa13.86□□□□□ -0.19
RDH11-207ENST00000554731 SPTBN4Q9H254 2564 aa13.85□□□□□ -0.19
RDH11-207ENST00000554731 B4GALT5O43286 388 aa13.85□□□□□ -0.19
RDH11-207ENST00000554731 PI15O43692 258 aa13.85□□□□□ -0.19
RDH11-207ENST00000554731 CTDNEP1O95476 244 aa13.85□□□□□ -0.19
RDH11-207ENST00000554731 C1RP00736 705 aa13.85□□□□□ -0.19
RDH11-207ENST00000554731 SPATA31D3P0C874 917 aa13.85□□□□□ -0.19
RDH11-207ENST00000554731 GLRA2P23416 452 aa13.85□□□□□ -0.19
RDH11-207ENST00000554731 USP41Q3LFD5 358 aa13.85□□□□□ -0.19
RDH11-207ENST00000554731 FUT10Q6P4F1 479 aa13.85□□□□□ -0.19
RDH11-207ENST00000554731 SLC27A1Q6PCB7 646 aa13.85□□□□□ -0.19
RDH11-207ENST00000554731 SPATA31D4Q6ZUB0 917 aa13.85□□□□□ -0.19
RDH11-207ENST00000554731 PALB2Q86YC2 1186 aa13.85□□□□□ -0.19
RDH11-207ENST00000554731 RSAD2Q8WXG1 361 aa13.85□□□□□ -0.19
RDH11-207ENST00000554731 TNFRSF25Q93038 417 aa13.85□□□□□ -0.19
RDH11-207ENST00000554731 ZNF707Q96C28 371 aaPredicted RBP13.85□□□□□ -0.19
RDH11-207ENST00000554731 B3GALT6Q96L58 329 aa13.85□□□□□ -0.19
RDH11-207ENST00000554731 GPR62Q9BZJ7 368 aa13.85□□□□□ -0.19
RDH11-207ENST00000554731 TTC12Q9H892 705 aaPredicted RBP13.85□□□□□ -0.19
RDH11-207ENST00000554731 PIDD1Q9HB75 910 aa13.85□□□□□ -0.19
RDH11-207ENST00000554731 FNIP2Q9P278 1114 aa13.85□□□□□ -0.19
RDH11-207ENST00000554731 WNT16Q9UBV4 365 aa13.85□□□□□ -0.19
RDH11-207ENST00000554731 ADAM28Q9UKQ2 775 aa13.85□□□□□ -0.19
RDH11-207ENST00000554731 CFAP54Q96N23 3096 aa13.84□□□□□ -0.19
RDH11-207ENST00000554731 ZMYM2Q9UBW7 1377 aa13.84□□□□□ -0.19
RDH11-207ENST00000554731 STK25O00506 426 aa13.84□□□□□ -0.19
RDH11-207ENST00000554731 TGM5O43548 720 aa13.84□□□□□ -0.19
RDH11-207ENST00000554731 NARSO43776 548 aaKnown RBP13.84□□□□□ -0.19
RDH11-207ENST00000554731 NPTXRO95502 500 aa13.84□□□□□ -0.19
RDH11-207ENST00000554731 CFHP08603 1231 aa13.84□□□□□ -0.19
RDH11-207ENST00000554731 RFX1P22670 979 aa13.84□□□□□ -0.19
RDH11-207ENST00000554731 AKAP5P24588 427 aa13.84□□□□□ -0.19
RDH11-207ENST00000554731 RARRES1P49788 294 aa13.84□□□□□ -0.19
RDH11-207ENST00000554731 CREMQ03060 361 aa13.84□□□□□ -0.19
RDH11-207ENST00000554731 GRIK3Q13003 919 aa13.84□□□□□ -0.19
RDH11-207ENST00000554731 ANKRD1Q15327 319 aa13.84□□□□□ -0.19
RDH11-207ENST00000554731 ANGPT1Q15389 498 aa13.84□□□□□ -0.19
RDH11-207ENST00000554731 GLYCTKQ8IVS8 523 aa13.84□□□□□ -0.19
RDH11-207ENST00000554731 DTWD2Q8NBA8 298 aa13.84□□□□□ -0.19
RDH11-207ENST00000554731 GSTCDQ8NEC7 633 aa13.84□□□□□ -0.19
RDH11-207ENST00000554731 PIGOQ8TEQ8 1089 aa13.84□□□□□ -0.19
RDH11-207ENST00000554731 RIN2Q8WYP3 895 aaPredicted RBP13.84□□□□□ -0.19
RDH11-207ENST00000554731 NXPE3Q969Y0 559 aa13.84□□□□□ -0.19
RDH11-207ENST00000554731 MYADMQ96S97 322 aa13.84□□□□□ -0.19
RDH11-207ENST00000554731 NT5C3AQ9H0P0 336 aa13.84□□□□□ -0.19
RDH11-207ENST00000554731 POLR3FQ9H1D9 316 aaPredicted RBP13.84□□□□□ -0.19
RDH11-207ENST00000554731 ZDHHC7Q9NXF8 308 aa13.84□□□□□ -0.19
RDH11-207ENST00000554731 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.84□□□□□ -0.19
RDH11-207ENST00000554731 PARP2Q9UGN5 583 aa13.84□□□□□ -0.19
RDH11-207ENST00000554731 ARID2Q68CP9 1835 aa13.84□□□□□ -0.19
RDH11-207ENST00000554731 GVINP1Q7Z2Y8 2422 aa13.84□□□□□ -0.19
RDH11-207ENST00000554731 A0A1B0GUA9 196 aa13.83□□□□□ -0.2
RDH11-207ENST00000554731 LRRIQ4A6NIV6 560 aa13.83□□□□□ -0.2
RDH11-207ENST00000554731 NEMFO60524 1076 aa13.83□□□□□ -0.2
RDH11-207ENST00000554731 USO1O60763 962 aaKnown RBP13.83□□□□□ -0.2
RDH11-207ENST00000554731 PAPLNO95428 1278 aa13.83□□□□□ -0.2
RDH11-207ENST00000554731 FDPSP14324 419 aaKnown RBP13.83□□□□□ -0.2
RDH11-207ENST00000554731 TXKP42681 527 aa13.83□□□□□ -0.2
RDH11-207ENST00000554731 CDR2LQ86X02 465 aaPredicted RBP13.83□□□□□ -0.2
RDH11-207ENST00000554731 SLC44A3Q8N4M1 653 aa13.83□□□□□ -0.2
RDH11-207ENST00000554731 PRKD2Q9BZL6 878 aa13.83□□□□□ -0.2
RDH11-207ENST00000554731 KLK14Q9P0G3 267 aa13.83□□□□□ -0.2
RDH11-207ENST00000554731 SF3B1O75533 1304 aaKnown RBP eCLIP13.83□□□□□ -0.22e-8■■■■■ 46.8
RDH11-207ENST00000554731 TDRD15B5MCY1 1934 aaKnown RBP13.82□□□□□ -0.2
RDH11-207ENST00000554731 KRBA1A5PL33 1030 aa13.82□□□□□ -0.2
RDH11-207ENST00000554731 TADA2AO75478 443 aa13.82□□□□□ -0.2
RDH11-207ENST00000554731 SRFP11831 508 aa13.82□□□□□ -0.2
RDH11-207ENST00000554731 XRCC6P12956 609 aaKnown RBP eCLIP13.82□□□□□ -0.2
RDH11-207ENST00000554731 RPL17P18621 184 aaKnown RBP13.82□□□□□ -0.2
RDH11-207ENST00000554731 ANAPC15P60006 121 aa13.82□□□□□ -0.2
RDH11-207ENST00000554731 HSP90AA2PQ14568 343 aaPredicted RBP13.82□□□□□ -0.2
RDH11-207ENST00000554731 LILRA6Q6PI73 481 aa13.82□□□□□ -0.2
RDH11-207ENST00000554731 GET4Q7L5D6 327 aaPredicted RBP13.82□□□□□ -0.2
RDH11-207ENST00000554731 NECAB1Q8N987 351 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms