RNA–Protein interactions for RNA: ENST00000554384.1

CHD8-207, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-207ENST00000554384 GBX1Q14549 363 aa6.6□□□□□ -1.35
CHD8-207ENST00000554384 C19orf54Q5BKX5 351 aa6.6□□□□□ -1.35
CHD8-207ENST00000554384 LCE5AQ5TCM9 118 aa6.6□□□□□ -1.35
CHD8-207ENST00000554384 MIGA2Q7L4E1 593 aa6.6□□□□□ -1.35
CHD8-207ENST00000554384 RALYLQ86SE5 291 aaKnown RBP6.6□□□□□ -1.35
CHD8-207ENST00000554384 PQLC1Q8N2U9 271 aa6.6□□□□□ -1.35
CHD8-207ENST00000554384 MDM1Q8TC05 714 aa6.6□□□□□ -1.35
CHD8-207ENST00000554384 C1GALT1C1Q96EU7 318 aa6.6□□□□□ -1.35
CHD8-207ENST00000554384 CGRRF1Q99675 332 aa6.6□□□□□ -1.35
CHD8-207ENST00000554384 PTPN18Q99952 460 aa6.6□□□□□ -1.35
CHD8-207ENST00000554384 TRPS1Q9UHF7 1281 aa6.6□□□□□ -1.35
CHD8-207ENST00000554384 FAM50BQ9Y247 325 aa6.6□□□□□ -1.35
CHD8-207ENST00000554384 CECR2Q9BXF3 1484 aa6.6□□□□□ -1.35
CHD8-207ENST00000554384 C9orf118A6NHY6 69 aa6.59□□□□□ -1.35
CHD8-207ENST00000554384 ERC2O15083 957 aa6.59□□□□□ -1.35
CHD8-207ENST00000554384 CAND2O75155 1236 aa6.59□□□□□ -1.35
CHD8-207ENST00000554384 ITGA10O75578 1167 aa6.59□□□□□ -1.35
CHD8-207ENST00000554384 UBXN7O94888 489 aa6.59□□□□□ -1.35
CHD8-207ENST00000554384 MAP2K6P52564 334 aa6.59□□□□□ -1.35
CHD8-207ENST00000554384 PER3P56645 1201 aa6.59□□□□□ -1.35
CHD8-207ENST00000554384 MEF2AQ02078 507 aaPredicted RBP6.59□□□□□ -1.35
CHD8-207ENST00000554384 NT5DC1Q5TFE4 455 aa6.59□□□□□ -1.35
CHD8-207ENST00000554384 TCERG1LQ5VWI1 586 aa6.59□□□□□ -1.35
CHD8-207ENST00000554384 CYB5RLQ6IPT4 315 aa6.59□□□□□ -1.35
CHD8-207ENST00000554384 CFHR4Q92496 578 aa6.59□□□□□ -1.35
CHD8-207ENST00000554384 SLC7A6OSQ96CW6 309 aaPredicted RBP6.59□□□□□ -1.35
CHD8-207ENST00000554384 CLPTM1LQ96KA5 538 aa6.59□□□□□ -1.35
CHD8-207ENST00000554384 UHRF1Q96T88 793 aaPredicted RBP6.59□□□□□ -1.35
CHD8-207ENST00000554384 C14orf93Q9H972 538 aaKnown RBP6.59□□□□□ -1.35
CHD8-207ENST00000554384 AGO3Q9H9G7 860 aaKnown RBP6.59□□□□□ -1.35
CHD8-207ENST00000554384 GPRC5DQ9NZD1 345 aa6.59□□□□□ -1.35
CHD8-207ENST00000554384 NR2E1Q9Y466 385 aa6.59□□□□□ -1.35
CHD8-207ENST00000554384 ZMYM3Q14202 1370 aa6.58□□□□□ -1.36
CHD8-207ENST00000554384 ARHGAP6O43182 974 aa6.58□□□□□ -1.36
CHD8-207ENST00000554384 KRT18P05783 430 aaKnown RBP6.58□□□□□ -1.36
CHD8-207ENST00000554384 FPR1P21462 350 aa6.58□□□□□ -1.36
CHD8-207ENST00000554384 PCSK1P29120 753 aa6.58□□□□□ -1.36
CHD8-207ENST00000554384 KRT40Q6A162 431 aa6.58□□□□□ -1.36
CHD8-207ENST00000554384 CIAPIN1Q6FI81 312 aa6.58□□□□□ -1.36
CHD8-207ENST00000554384 TTLL10Q6ZVT0 673 aa6.58□□□□□ -1.36
CHD8-207ENST00000554384 DENND1CQ8IV53 801 aa6.58□□□□□ -1.36
CHD8-207ENST00000554384 CCAR1Q8IX12 1150 aaKnown RBP6.58□□□□□ -1.36
CHD8-207ENST00000554384 DRC7Q8IY82 874 aa6.58□□□□□ -1.36
CHD8-207ENST00000554384 TRMT2AQ8IZ69 625 aaKnown RBP6.58□□□□□ -1.36
CHD8-207ENST00000554384 PLBD2Q8NHP8 589 aa6.58□□□□□ -1.36
CHD8-207ENST00000554384 ZNF480Q8WV37 535 aa6.58□□□□□ -1.36
CHD8-207ENST00000554384 NT5C1BQ96P26 610 aa6.58□□□□□ -1.36
CHD8-207ENST00000554384 VRK1Q99986 396 aaPredicted RBP6.58□□□□□ -1.36
CHD8-207ENST00000554384 ARMT1Q9H993 441 aa6.58□□□□□ -1.36
CHD8-207ENST00000554384 PRDM11Q9NQV5 511 aa6.58□□□□□ -1.36
CHD8-207ENST00000554384 C1orf112Q9NSG2 853 aa6.58□□□□□ -1.36
CHD8-207ENST00000554384 PCDHA3Q9Y5H8 950 aa6.58□□□□□ -1.36
CHD8-207ENST00000554384 NR2E3Q9Y5X4 410 aa6.58□□□□□ -1.36
CHD8-207ENST00000554384 RB1CC1Q8TDY2 1594 aa6.57□□□□□ -1.36
CHD8-207ENST00000554384 MYBBP1AQ9BQG0 1328 aaKnown RBP6.57□□□□□ -1.36
CHD8-207ENST00000554384 FAM171A2A8MVW0 826 aa6.57□□□□□ -1.36
CHD8-207ENST00000554384 APAF1O14727 1248 aa6.57□□□□□ -1.36
CHD8-207ENST00000554384 B3GALT2O43825 422 aa6.57□□□□□ -1.36
CHD8-207ENST00000554384 DTNBO60941 627 aa6.57□□□□□ -1.36
CHD8-207ENST00000554384 PHF2O75151 1096 aa6.57□□□□□ -1.36
CHD8-207ENST00000554384 TUSC2O75896 110 aa6.57□□□□□ -1.36
CHD8-207ENST00000554384 STC2O76061 302 aa6.57□□□□□ -1.36
CHD8-207ENST00000554384 CNOT4O95628 575 aaKnown RBP6.57□□□□□ -1.36
CHD8-207ENST00000554384 FTLP02792 175 aaPredicted RBP6.57□□□□□ -1.36
CHD8-207ENST00000554384 VSIG10L2P0DP72 767 aa6.57□□□□□ -1.36
CHD8-207ENST00000554384 HTR1BP28222 390 aa6.57□□□□□ -1.36
CHD8-207ENST00000554384 PTPN7P35236 360 aa6.57□□□□□ -1.36
CHD8-207ENST00000554384 KCNC1P48547 511 aa6.57□□□□□ -1.36
CHD8-207ENST00000554384 ZNF280AP59817 542 aaPredicted RBP6.57□□□□□ -1.36
CHD8-207ENST00000554384 KHDC1Q4VXA5 237 aaKnown RBP6.57□□□□□ -1.36
CHD8-207ENST00000554384 ZMAT1Q5H9K5 638 aa6.57□□□□□ -1.36
CHD8-207ENST00000554384 PRAMEF14Q5SWL7 426 aa6.57□□□□□ -1.36
CHD8-207ENST00000554384 TMEM151BQ8IW70 566 aa6.57□□□□□ -1.36
CHD8-207ENST00000554384 OR7D4Q8NG98 312 aa6.57□□□□□ -1.36
CHD8-207ENST00000554384 OR5M3Q8NGP4 307 aa6.57□□□□□ -1.36
CHD8-207ENST00000554384 NSUN6Q8TEA1 469 aaKnown RBP6.57□□□□□ -1.36
CHD8-207ENST00000554384 CEP95Q96GE4 821 aa6.57□□□□□ -1.36
CHD8-207ENST00000554384 PAWRQ96IZ0 340 aaKnown RBP6.57□□□□□ -1.36
CHD8-207ENST00000554384 TMX3Q96JJ7 454 aa6.57□□□□□ -1.36
CHD8-207ENST00000554384 DPYSL5Q9BPU6 564 aa6.57□□□□□ -1.36
CHD8-207ENST00000554384 SLC6A15Q9H2J7 730 aa6.57□□□□□ -1.36
CHD8-207ENST00000554384 TDP1Q9NUW8 608 aa6.57□□□□□ -1.36
CHD8-207ENST00000554384 AJAP1Q9UKB5 411 aaPredicted RBP6.57□□□□□ -1.36
CHD8-207ENST00000554384 ACTL7AQ9Y615 435 aa6.57□□□□□ -1.36
CHD8-207ENST00000554384 CFAP20Q9Y6A4 193 aaKnown RBP6.57□□□□□ -1.36
CHD8-207ENST00000554384 UBE2QL1A1L167 161 aa6.56□□□□□ -1.36
CHD8-207ENST00000554384 H3BML4 177 aa6.56□□□□□ -1.36
CHD8-207ENST00000554384 TRIM13O60858 407 aa6.56□□□□□ -1.36
CHD8-207ENST00000554384 DUSP2Q05923 314 aa6.56□□□□□ -1.36
CHD8-207ENST00000554384 FAM214AQ32MH5 1076 aa6.56□□□□□ -1.36
CHD8-207ENST00000554384 COBLL1Q53SF7 1204 aa6.56□□□□□ -1.36
CHD8-207ENST00000554384 MFSD14BQ5SR56 506 aa6.56□□□□□ -1.36
CHD8-207ENST00000554384 SYCP2LQ5T4T6 812 aa6.56□□□□□ -1.36
CHD8-207ENST00000554384 FAM180AQ6UWF9 173 aa6.56□□□□□ -1.36
CHD8-207ENST00000554384 NPNTQ6UXI9 565 aa6.56□□□□□ -1.36
CHD8-207ENST00000554384 ADGRE4PQ86SQ3 457 aa6.56□□□□□ -1.36
CHD8-207ENST00000554384 RSPH3Q86UC2 560 aa6.56□□□□□ -1.36
CHD8-207ENST00000554384 SH2D3CQ8N5H7 860 aa6.56□□□□□ -1.36
CHD8-207ENST00000554384 FAM156AQ8NDB6 213 aa6.56□□□□□ -1.36
CHD8-207ENST00000554384 RGMAQ96B86 450 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms