RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 SGPL1O95470 568 aa8.33□□□□□ -1.08
TDP1-209ENST00000554180 AFPP02771 609 aaKnown RBP8.33□□□□□ -1.08
TDP1-209ENST00000554180 MCF2P10911 925 aa8.33□□□□□ -1.08
TDP1-209ENST00000554180 ARF4P18085 180 aaPredicted RBP8.33□□□□□ -1.08
TDP1-209ENST00000554180 GTF2H1P32780 548 aa8.33□□□□□ -1.08
TDP1-209ENST00000554180 MATR3P43243 847 aaKnown RBP eCLIP8.33□□□□□ -1.08
TDP1-209ENST00000554180 GJA8P48165 433 aa8.33□□□□□ -1.08
TDP1-209ENST00000554180 CDK7P50613 346 aa8.33□□□□□ -1.08
TDP1-209ENST00000554180 VAMP7P51809 220 aa8.33□□□□□ -1.08
TDP1-209ENST00000554180 GSDMDP57764 484 aa8.33□□□□□ -1.08
TDP1-209ENST00000554180 CYP24A1Q07973 514 aa8.33□□□□□ -1.08
TDP1-209ENST00000554180 TRIM71Q2Q1W2 868 aaKnown RBP8.33□□□□□ -1.08
TDP1-209ENST00000554180 DCAF4L1Q3SXM0 396 aa8.33□□□□□ -1.08
TDP1-209ENST00000554180 ZNF568Q3ZCX4 644 aa8.33□□□□□ -1.08
TDP1-209ENST00000554180 FAM26DQ5JW98 314 aa8.33□□□□□ -1.08
TDP1-209ENST00000554180 C1orf53Q5VUE5 145 aa8.33□□□□□ -1.08
TDP1-209ENST00000554180 NOTUMQ6P988 496 aa8.33□□□□□ -1.08
TDP1-209ENST00000554180 CATSPER4Q7RTX7 472 aa8.33□□□□□ -1.08
TDP1-209ENST00000554180 CBWD2Q8IUF1 395 aa8.33□□□□□ -1.08
TDP1-209ENST00000554180 DRC7Q8IY82 874 aa8.33□□□□□ -1.08
TDP1-209ENST00000554180 CCDC155Q8N6L0 562 aa8.33□□□□□ -1.08
TDP1-209ENST00000554180 USP38Q8NB14 1042 aa8.33□□□□□ -1.08
TDP1-209ENST00000554180 CAGE1Q8TC20 777 aa8.33□□□□□ -1.08
TDP1-209ENST00000554180 PPP1R13LQ8WUF5 828 aa8.33□□□□□ -1.08
TDP1-209ENST00000554180 EVPLQ92817 2033 aa8.33□□□□□ -1.08
TDP1-209ENST00000554180 SAAL1Q96ER3 474 aa8.33□□□□□ -1.08
TDP1-209ENST00000554180 ZNF668Q96K58 619 aaPredicted RBP8.33□□□□□ -1.08
TDP1-209ENST00000554180 MFSD14AQ96MC6 490 aa8.33□□□□□ -1.08
TDP1-209ENST00000554180 PPP1R16BQ96T49 567 aa8.33□□□□□ -1.08
TDP1-209ENST00000554180 OSMRQ99650 979 aa8.33□□□□□ -1.08
TDP1-209ENST00000554180 ADPGKQ9BRR6 497 aa8.33□□□□□ -1.08
TDP1-209ENST00000554180 TCHPQ9BT92 498 aa8.33□□□□□ -1.08
TDP1-209ENST00000554180 PCIF1Q9H4Z3 704 aa8.33□□□□□ -1.08
TDP1-209ENST00000554180 PDZD7Q9H5P4 517 aa8.33□□□□□ -1.08
TDP1-209ENST00000554180 AGPAT5Q9NUQ2 364 aa8.33□□□□□ -1.08
TDP1-209ENST00000554180 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.33□□□□□ -1.08
TDP1-209ENST00000554180 TTLL13PA6NNM8 815 aa8.32□□□□□ -1.08
TDP1-209ENST00000554180 TEX33O43247 280 aa8.32□□□□□ -1.08
TDP1-209ENST00000554180 B4GALT4O60513 344 aa8.32□□□□□ -1.08
TDP1-209ENST00000554180 ADRB2P07550 413 aa8.32□□□□□ -1.08
TDP1-209ENST00000554180 CLTAP09496 248 aa8.32□□□□□ -1.08
TDP1-209ENST00000554180 HOXA11P31270 313 aaPredicted RBP8.32□□□□□ -1.08
TDP1-209ENST00000554180 AP3M2P53677 418 aa8.32□□□□□ -1.08
TDP1-209ENST00000554180 CLDN10P78369 228 aa8.32□□□□□ -1.08
TDP1-209ENST00000554180 MGAT3Q09327 533 aa8.32□□□□□ -1.08
TDP1-209ENST00000554180 TMEM62Q0P6H9 643 aa8.32□□□□□ -1.08
TDP1-209ENST00000554180 CETN1Q12798 172 aa8.32□□□□□ -1.08
TDP1-209ENST00000554180 KCNH2Q12809 1159 aa8.32□□□□□ -1.08
TDP1-209ENST00000554180 PSMD6Q15008 389 aa8.32□□□□□ -1.08
TDP1-209ENST00000554180 SURF1Q15526 300 aa8.32□□□□□ -1.08
TDP1-209ENST00000554180 HS1BP3Q53T59 392 aa8.32□□□□□ -1.08
TDP1-209ENST00000554180 DCAF17Q5H9S7 520 aaPredicted RBP8.32□□□□□ -1.08
TDP1-209ENST00000554180 FIGNQ5HY92 759 aa8.32□□□□□ -1.08
TDP1-209ENST00000554180 TCERG1LQ5VWI1 586 aa8.32□□□□□ -1.08
TDP1-209ENST00000554180 TMC6Q7Z403 805 aa8.32□□□□□ -1.08
TDP1-209ENST00000554180 BRSK2Q8IWQ3 736 aa8.32□□□□□ -1.08
TDP1-209ENST00000554180 FAM126BQ8IXS8 530 aa8.32□□□□□ -1.08
TDP1-209ENST00000554180 CCDC150Q8NCX0 1101 aa8.32□□□□□ -1.08
TDP1-209ENST00000554180 PARD3BQ8TEW8 1205 aa8.32□□□□□ -1.08
TDP1-209ENST00000554180 TMEM40Q8WWA1 233 aa8.32□□□□□ -1.08
TDP1-209ENST00000554180 DHX38Q92620 1227 aaKnown RBP8.32□□□□□ -1.08
TDP1-209ENST00000554180 WNT8BQ93098 351 aa8.32□□□□□ -1.08
TDP1-209ENST00000554180 ZBTB45Q96K62 511 aaPredicted RBP8.32□□□□□ -1.08
TDP1-209ENST00000554180 TOX2Q96NM4 488 aa8.32□□□□□ -1.08
TDP1-209ENST00000554180 FAM213AQ9BRX8 229 aa8.32□□□□□ -1.08
TDP1-209ENST00000554180 NUP58Q9BVL2 599 aa8.32□□□□□ -1.08
TDP1-209ENST00000554180 HAPLN2Q9GZV7 340 aa8.32□□□□□ -1.08
TDP1-209ENST00000554180 CDT1Q9H211 546 aa8.32□□□□□ -1.08
TDP1-209ENST00000554180 CDHR5Q9HBB8 845 aa8.32□□□□□ -1.08
TDP1-209ENST00000554180 CHST12Q9NRB3 414 aa8.32□□□□□ -1.08
TDP1-209ENST00000554180 TRMT13Q9NUP7 481 aaKnown RBP8.32□□□□□ -1.08
TDP1-209ENST00000554180 CPSF3Q9UKF6 684 aaKnown RBP8.32□□□□□ -1.08
TDP1-209ENST00000554180 GINS2Q9Y248 185 aa8.32□□□□□ -1.08
TDP1-209ENST00000554180 DAAM1Q9Y4D1 1078 aa8.32□□□□□ -1.08
TDP1-209ENST00000554180 CDY2AQ9Y6F7 541 aa8.32□□□□□ -1.08
TDP1-209ENST00000554180 GOLGA8IPA6NC78 632 aa8.31□□□□□ -1.08
TDP1-209ENST00000554180 GOLGA8JA6NMD2 632 aa8.31□□□□□ -1.08
TDP1-209ENST00000554180 PITPNM1O00562 1244 aa8.31□□□□□ -1.08
TDP1-209ENST00000554180 GPR182O15218 404 aa8.31□□□□□ -1.08
TDP1-209ENST00000554180 TLR3O15455 904 aaKnown RBP8.31□□□□□ -1.08
TDP1-209ENST00000554180 CSDE1O75534 798 aaKnown RBP8.31□□□□□ -1.08
TDP1-209ENST00000554180 RPS6KA5O75582 802 aa8.31□□□□□ -1.08
TDP1-209ENST00000554180 IL18RAPO95256 599 aa8.31□□□□□ -1.08
TDP1-209ENST00000554180 CHRNA1P02708 482 aa8.31□□□□□ -1.08
TDP1-209ENST00000554180 TFRCP02786 760 aaKnown RBP8.31□□□□□ -1.08
TDP1-209ENST00000554180 PTMAP06454 111 aaKnown RBP8.31□□□□□ -1.08
TDP1-209ENST00000554180 TPM1P09493 284 aa8.31□□□□□ -1.08
TDP1-209ENST00000554180 COL6A1P12109 1028 aa8.31□□□□□ -1.08
TDP1-209ENST00000554180 TRIM21P19474 475 aaKnown RBP8.31□□□□□ -1.08
TDP1-209ENST00000554180 THPOP40225 353 aa8.31□□□□□ -1.08
TDP1-209ENST00000554180 FMO5P49326 533 aa8.31□□□□□ -1.08
TDP1-209ENST00000554180 MNX1P50219 401 aaPredicted RBP8.31□□□□□ -1.08
TDP1-209ENST00000554180 MXI1P50539 228 aa8.31□□□□□ -1.08
TDP1-209ENST00000554180 TBX2Q13207 712 aaPredicted RBP8.31□□□□□ -1.08
TDP1-209ENST00000554180 BFSP2Q13515 415 aa8.31□□□□□ -1.08
TDP1-209ENST00000554180 SYCP1Q15431 976 aa8.31□□□□□ -1.08
TDP1-209ENST00000554180 FBXO47Q5MNV8 452 aa8.31□□□□□ -1.08
TDP1-209ENST00000554180 EEF1DP3Q658K8 133 aa8.31□□□□□ -1.08
TDP1-209ENST00000554180 SLC27A1Q6PCB7 646 aa8.31□□□□□ -1.08
TDP1-209ENST00000554180 CRELD2Q6UXH1 353 aaPredicted RBP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms