RNA–Protein interactions for RNA: ENST00000554028.3

TMEM55B-205, humanhuman

TSL 2

Gene TMEM55B, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-205ENST00000554028 NOTUMQ6P988 496 aa11.4□□□□□ -0.58
TMEM55B-205ENST00000554028 TRIM59Q8IWR1 403 aa11.4□□□□□ -0.58
TMEM55B-205ENST00000554028 USP38Q8NB14 1042 aa11.4□□□□□ -0.58
TMEM55B-205ENST00000554028 PCMTD1Q96MG8 357 aaPredicted RBP11.4□□□□□ -0.58
TMEM55B-205ENST00000554028 FAM213AQ9BRX8 229 aa11.4□□□□□ -0.58
TMEM55B-205ENST00000554028 NDST4Q9H3R1 872 aa11.4□□□□□ -0.58
TMEM55B-205ENST00000554028 MINDY3Q9H8M7 445 aa11.4□□□□□ -0.58
TMEM55B-205ENST00000554028 RTN4Q9NQC3 1192 aaKnown RBP11.4□□□□□ -0.58
TMEM55B-205ENST00000554028 TRMT13Q9NUP7 481 aaKnown RBP11.4□□□□□ -0.58
TMEM55B-205ENST00000554028 WDR81Q562E7 1941 aa11.39□□□□□ -0.59
TMEM55B-205ENST00000554028 GOLGA8IPA6NC78 632 aa11.39□□□□□ -0.59
TMEM55B-205ENST00000554028 GOLGA8JA6NMD2 632 aa11.39□□□□□ -0.59
TMEM55B-205ENST00000554028 LGALS16A8MUM7 142 aa11.39□□□□□ -0.59
TMEM55B-205ENST00000554028 TISP43B9A030 160 aa11.39□□□□□ -0.59
TMEM55B-205ENST00000554028 OGTO15294 1046 aa11.39□□□□□ -0.59
TMEM55B-205ENST00000554028 B4GALT4O60513 344 aa11.39□□□□□ -0.59
TMEM55B-205ENST00000554028 TSPAN1O60635 241 aa11.39□□□□□ -0.59
TMEM55B-205ENST00000554028 CSDE1O75534 798 aaKnown RBP11.39□□□□□ -0.59
TMEM55B-205ENST00000554028 RPS6KA5O75582 802 aa11.39□□□□□ -0.59
TMEM55B-205ENST00000554028 SLC34A2O95436 690 aa11.39□□□□□ -0.59
TMEM55B-205ENST00000554028 AFPP02771 609 aaKnown RBP11.39□□□□□ -0.59
TMEM55B-205ENST00000554028 PTMAP06454 111 aaKnown RBP11.39□□□□□ -0.59
TMEM55B-205ENST00000554028 TPM1P09493 284 aa11.39□□□□□ -0.59
TMEM55B-205ENST00000554028 CTSHP09668 335 aa11.39□□□□□ -0.59
TMEM55B-205ENST00000554028 MCF2P10911 925 aa11.39□□□□□ -0.59
TMEM55B-205ENST00000554028 ADSSP30520 456 aa11.39□□□□□ -0.59
TMEM55B-205ENST00000554028 CDK7P50613 346 aa11.39□□□□□ -0.59
TMEM55B-205ENST00000554028 VAMP7P51809 220 aa11.39□□□□□ -0.59
TMEM55B-205ENST00000554028 ENPEPQ07075 957 aa11.39□□□□□ -0.59
TMEM55B-205ENST00000554028 MCL1Q07820 350 aa11.39□□□□□ -0.59
TMEM55B-205ENST00000554028 NOLC1Q14978 699 aaKnown RBP eCLIP11.39□□□□□ -0.59
TMEM55B-205ENST00000554028 NR1I3Q14994 352 aa11.39□□□□□ -0.59
TMEM55B-205ENST00000554028 SURF1Q15526 300 aa11.39□□□□□ -0.59
TMEM55B-205ENST00000554028 DCAF4L1Q3SXM0 396 aa11.39□□□□□ -0.59
TMEM55B-205ENST00000554028 SLC39A4Q6P5W5 647 aa11.39□□□□□ -0.59
TMEM55B-205ENST00000554028 SLC39A5Q6ZMH5 540 aa11.39□□□□□ -0.59
TMEM55B-205ENST00000554028 ZBTB33Q86T24 672 aa11.39□□□□□ -0.59
TMEM55B-205ENST00000554028 CAGE1Q8TC20 777 aa11.39□□□□□ -0.59
TMEM55B-205ENST00000554028 SAAL1Q96ER3 474 aa11.39□□□□□ -0.59
TMEM55B-205ENST00000554028 CCDC51Q96ER9 411 aa11.39□□□□□ -0.59
TMEM55B-205ENST00000554028 ZBTB45Q96K62 511 aaPredicted RBP11.39□□□□□ -0.59
TMEM55B-205ENST00000554028 NAP1L5Q96NT1 182 aaPredicted RBP11.39□□□□□ -0.59
TMEM55B-205ENST00000554028 FNBP1Q96RU3 617 aa11.39□□□□□ -0.59
TMEM55B-205ENST00000554028 TRPV6Q9H1D0 765 aa11.39□□□□□ -0.59
TMEM55B-205ENST00000554028 CDHR5Q9HBB8 845 aa11.39□□□□□ -0.59
TMEM55B-205ENST00000554028 A0A1B0GUA9 196 aa11.38□□□□□ -0.59
TMEM55B-205ENST00000554028 B4GALT5O43286 388 aa11.38□□□□□ -0.59
TMEM55B-205ENST00000554028 AP5Z1O43299 807 aa11.38□□□□□ -0.59
TMEM55B-205ENST00000554028 N4BP1O75113 896 aaKnown RBP11.38□□□□□ -0.59
TMEM55B-205ENST00000554028 ZSCAN20P17040 1043 aaPredicted RBP11.38□□□□□ -0.59
TMEM55B-205ENST00000554028 ARF4P18085 180 aaPredicted RBP11.38□□□□□ -0.59
TMEM55B-205ENST00000554028 DEKP35659 375 aaKnown RBP11.38□□□□□ -0.59
TMEM55B-205ENST00000554028 KCNH2Q12809 1159 aa11.38□□□□□ -0.59
TMEM55B-205ENST00000554028 BFSP1Q12934 665 aa11.38□□□□□ -0.59
TMEM55B-205ENST00000554028 AMHR2Q16671 573 aa11.38□□□□□ -0.59
TMEM55B-205ENST00000554028 FAM26DQ5JW98 314 aa11.38□□□□□ -0.59
TMEM55B-205ENST00000554028 LCE2DQ5TA82 110 aaPredicted RBP11.38□□□□□ -0.59
TMEM55B-205ENST00000554028 SLC27A1Q6PCB7 646 aa11.38□□□□□ -0.59
TMEM55B-205ENST00000554028 FAM43BQ6ZT52 329 aaPredicted RBP11.38□□□□□ -0.59
TMEM55B-205ENST00000554028 NECAB2Q7Z6G3 386 aa11.38□□□□□ -0.59
TMEM55B-205ENST00000554028 PPFIBP1Q86W92 1011 aa11.38□□□□□ -0.59
TMEM55B-205ENST00000554028 HACE1Q8IYU2 909 aa11.38□□□□□ -0.59
TMEM55B-205ENST00000554028 TMC2Q8TDI7 906 aa11.38□□□□□ -0.59
TMEM55B-205ENST00000554028 CPB2Q96IY4 423 aa11.38□□□□□ -0.59
TMEM55B-205ENST00000554028 FBXL18Q96ME1 805 aa11.38□□□□□ -0.59
TMEM55B-205ENST00000554028 CCDC94Q9BW85 323 aaPredicted RBP11.38□□□□□ -0.59
TMEM55B-205ENST00000554028 TRIM6Q9C030 488 aaPredicted RBP11.38□□□□□ -0.59
TMEM55B-205ENST00000554028 MCOLN1Q9GZU1 580 aa11.38□□□□□ -0.59
TMEM55B-205ENST00000554028 C11orf49Q9H6J7 331 aa11.38□□□□□ -0.59
TMEM55B-205ENST00000554028 CHST12Q9NRB3 414 aa11.38□□□□□ -0.59
TMEM55B-205ENST00000554028 PIN4Q9Y237 131 aaKnown RBP11.38□□□□□ -0.59
TMEM55B-205ENST00000554028 USP20Q9Y2K6 914 aa11.38□□□□□ -0.59
TMEM55B-205ENST00000554028 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.38□□□□□ -0.59
TMEM55B-205ENST00000554028 SQORQ9Y6N5 450 aa11.38□□□□□ -0.59
TMEM55B-205ENST00000554028 A0A1W2PQC6 194 aa11.37□□□□□ -0.59
TMEM55B-205ENST00000554028 PQBP1O60828 265 aaKnown RBP11.37□□□□□ -0.59
TMEM55B-205ENST00000554028 CHRNA1P02708 482 aa11.37□□□□□ -0.59
TMEM55B-205ENST00000554028 CLTAP09496 248 aa11.37□□□□□ -0.59
TMEM55B-205ENST00000554028 IQCF3P0C7M6 154 aa11.37□□□□□ -0.59
TMEM55B-205ENST00000554028 CKBP12277 381 aa11.37□□□□□ -0.59
TMEM55B-205ENST00000554028 FGFR4P22455 802 aa11.37□□□□□ -0.59
TMEM55B-205ENST00000554028 PROZP22891 400 aa11.37□□□□□ -0.59
TMEM55B-205ENST00000554028 ACOT2P49753 483 aa11.37□□□□□ -0.59
TMEM55B-205ENST00000554028 ATN1P54259 1190 aaPredicted RBP11.37□□□□□ -0.59
TMEM55B-205ENST00000554028 POU5F1Q01860 360 aaKnown RBP11.37□□□□□ -0.59
TMEM55B-205ENST00000554028 NFX1Q12986 1120 aaKnown RBP11.37□□□□□ -0.59
TMEM55B-205ENST00000554028 PAK2Q13177 524 aa11.37□□□□□ -0.59
TMEM55B-205ENST00000554028 C1orf53Q5VUE5 145 aa11.37□□□□□ -0.59
TMEM55B-205ENST00000554028 SPECC1LQ69YQ0 1117 aa11.37□□□□□ -0.59
TMEM55B-205ENST00000554028 APTXQ7Z2E3 356 aaKnown RBP11.37□□□□□ -0.59
TMEM55B-205ENST00000554028 CBWD2Q8IUF1 395 aa11.37□□□□□ -0.59
TMEM55B-205ENST00000554028 FAM126BQ8IXS8 530 aa11.37□□□□□ -0.59
TMEM55B-205ENST00000554028 THNSL1Q8IYQ7 743 aa11.37□□□□□ -0.59
TMEM55B-205ENST00000554028 IQCDQ96DY2 449 aa11.37□□□□□ -0.59
TMEM55B-205ENST00000554028 BORCS6Q96GS4 357 aa11.37□□□□□ -0.59
TMEM55B-205ENST00000554028 MFSD14AQ96MC6 490 aa11.37□□□□□ -0.59
TMEM55B-205ENST00000554028 TOX2Q96NM4 488 aa11.37□□□□□ -0.59
TMEM55B-205ENST00000554028 NUP58Q9BVL2 599 aa11.37□□□□□ -0.59
TMEM55B-205ENST00000554028 CDT1Q9H211 546 aa11.37□□□□□ -0.59
TMEM55B-205ENST00000554028 PDZD7Q9H5P4 517 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms