RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 NEDD9Q14511 834 aa5.6□□□□□ -1.51
VTI1B-202ENST00000553619 EPHA7Q15375 998 aa5.6□□□□□ -1.51
VTI1B-202ENST00000553619 LRCH2Q5VUJ6 765 aa5.6□□□□□ -1.51
VTI1B-202ENST00000553619 SHC4Q6S5L8 630 aa5.6□□□□□ -1.51
VTI1B-202ENST00000553619 SASS6Q6UVJ0 657 aa5.6□□□□□ -1.51
VTI1B-202ENST00000553619 C17orf99Q6UX52 265 aa5.6□□□□□ -1.51
VTI1B-202ENST00000553619 SLC30A10Q6XR72 485 aa5.6□□□□□ -1.51
VTI1B-202ENST00000553619 GPR142Q7Z601 462 aa5.6□□□□□ -1.51
VTI1B-202ENST00000553619 CABP7Q86V35 215 aa5.6□□□□□ -1.51
VTI1B-202ENST00000553619 IGSF22Q8N9C0 903 aa5.6□□□□□ -1.51
VTI1B-202ENST00000553619 FAM133AQ8N9E0 248 aa5.6□□□□□ -1.51
VTI1B-202ENST00000553619 ENGASEQ8NFI3 743 aa5.6□□□□□ -1.51
VTI1B-202ENST00000553619 RDM1Q8NG50 284 aa5.6□□□□□ -1.51
VTI1B-202ENST00000553619 GPT2Q8TD30 523 aa5.6□□□□□ -1.51
VTI1B-202ENST00000553619 HAS1Q92839 578 aa5.6□□□□□ -1.51
VTI1B-202ENST00000553619 SENP7Q9BQF6 1050 aa5.6□□□□□ -1.51
VTI1B-202ENST00000553619 NIF3L1Q9GZT8 377 aa5.6□□□□□ -1.51
VTI1B-202ENST00000553619 TMEM60Q9H2L4 133 aa5.6□□□□□ -1.51
VTI1B-202ENST00000553619 TXNRD2Q9NNW7 524 aa5.6□□□□□ -1.51
VTI1B-202ENST00000553619 KCNH7Q9NS40 1196 aa5.6□□□□□ -1.51
VTI1B-202ENST00000553619 DACT1Q9NYF0 836 aa5.6□□□□□ -1.51
VTI1B-202ENST00000553619 CPA4Q9UI42 421 aa5.6□□□□□ -1.51
VTI1B-202ENST00000553619 HPSEQ9Y251 543 aa5.6□□□□□ -1.51
VTI1B-202ENST00000553619 RBBP6Q7Z6E9 1792 aaKnown RBP5.6□□□□□ -1.51
VTI1B-202ENST00000553619 NFASCO94856 1347 aa5.59□□□□□ -1.51
VTI1B-202ENST00000553619 DNAJC25-GNG10A0A024R161 153 aa5.59□□□□□ -1.51
VTI1B-202ENST00000553619 IGLV3-22A0A075B6J6 115 aa5.59□□□□□ -1.51
VTI1B-202ENST00000553619 FAM86B1E9PN63 330 aa5.59□□□□□ -1.51
VTI1B-202ENST00000553619 EIF1AYO14602 144 aaKnown RBP5.59□□□□□ -1.51
VTI1B-202ENST00000553619 MSH4O15457 936 aa5.59□□□□□ -1.51
VTI1B-202ENST00000553619 POLR2DO15514 142 aaKnown RBP5.59□□□□□ -1.51
VTI1B-202ENST00000553619 SLC37A4O43826 429 aa5.59□□□□□ -1.51
VTI1B-202ENST00000553619 EDIL3O43854 480 aa5.59□□□□□ -1.51
VTI1B-202ENST00000553619 PSMD10O75832 226 aa5.59□□□□□ -1.51
VTI1B-202ENST00000553619 CAVIN2O95810 425 aa5.59□□□□□ -1.51
VTI1B-202ENST00000553619 P4HBP07237 508 aaKnown RBP5.59□□□□□ -1.51
VTI1B-202ENST00000553619 NFICP08651 508 aa5.59□□□□□ -1.51
VTI1B-202ENST00000553619 HOXC6P09630 235 aa5.59□□□□□ -1.51
VTI1B-202ENST00000553619 FAM86B2P0C5J1 330 aa5.59□□□□□ -1.51
VTI1B-202ENST00000553619 SLFN14P0C7P3 912 aa5.59□□□□□ -1.51
VTI1B-202ENST00000553619 ARP10275 920 aa5.59□□□□□ -1.51
VTI1B-202ENST00000553619 XRCC6P12956 609 aaKnown RBP eCLIP5.59□□□□□ -1.51
VTI1B-202ENST00000553619 LIG1P18858 919 aa5.59□□□□□ -1.51
VTI1B-202ENST00000553619 RPA1P27694 616 aa5.59□□□□□ -1.51
VTI1B-202ENST00000553619 ADORA2AP29274 412 aa5.59□□□□□ -1.51
VTI1B-202ENST00000553619 CCT6AP40227 531 aaKnown RBP5.59□□□□□ -1.51
VTI1B-202ENST00000553619 RGS2P41220 211 aa5.59□□□□□ -1.51
VTI1B-202ENST00000553619 STAT6P42226 847 aa5.59□□□□□ -1.51
VTI1B-202ENST00000553619 NDUFA8P51970 172 aa5.59□□□□□ -1.51
VTI1B-202ENST00000553619 JAK3P52333 1124 aa5.59□□□□□ -1.51
VTI1B-202ENST00000553619 FCGRTP55899 365 aa5.59□□□□□ -1.51
VTI1B-202ENST00000553619 UBXN2AP68543 259 aa5.59□□□□□ -1.51
VTI1B-202ENST00000553619 CNTN2Q02246 1040 aa5.59□□□□□ -1.51
VTI1B-202ENST00000553619 PPP2R5CQ13362 524 aa5.59□□□□□ -1.51
VTI1B-202ENST00000553619 SNW1Q13573 536 aaKnown RBP5.59□□□□□ -1.51
VTI1B-202ENST00000553619 TTLL4Q14679 1199 aa5.59□□□□□ -1.51
VTI1B-202ENST00000553619 COL19A1Q14993 1142 aa5.59□□□□□ -1.51
VTI1B-202ENST00000553619 ZNF792Q3KQV3 632 aa5.59□□□□□ -1.51
VTI1B-202ENST00000553619 KRBA2Q6ZNG9 492 aa5.59□□□□□ -1.51
VTI1B-202ENST00000553619 CBLL1Q75N03 491 aa5.59□□□□□ -1.51
VTI1B-202ENST00000553619 SV2BQ7L1I2 683 aa5.59□□□□□ -1.51
VTI1B-202ENST00000553619 OTOP1Q7RTM1 612 aa5.59□□□□□ -1.51
VTI1B-202ENST00000553619 DYMQ7RTS9 669 aa5.59□□□□□ -1.51
VTI1B-202ENST00000553619 MIER3Q7Z3K6 550 aa5.59□□□□□ -1.51
VTI1B-202ENST00000553619 ETNPPLQ8TBG4 499 aa5.59□□□□□ -1.51
VTI1B-202ENST00000553619 NEK9Q8TD19 979 aa5.59□□□□□ -1.51
VTI1B-202ENST00000553619 MORC4Q8TE76 937 aa5.59□□□□□ -1.51
VTI1B-202ENST00000553619 SOCS4Q8WXH5 440 aa5.59□□□□□ -1.51
VTI1B-202ENST00000553619 SLC5A5Q92911 643 aa5.59□□□□□ -1.51
VTI1B-202ENST00000553619 CCDC74AQ96AQ1 378 aa5.59□□□□□ -1.51
VTI1B-202ENST00000553619 EPSTI1Q96J88 318 aa5.59□□□□□ -1.51
VTI1B-202ENST00000553619 INPP4AQ96PE3 977 aaPredicted RBP5.59□□□□□ -1.51
VTI1B-202ENST00000553619 POLR3CQ9BUI4 534 aaPredicted RBP5.59□□□□□ -1.51
VTI1B-202ENST00000553619 SEMA6CQ9H3T2 930 aa5.59□□□□□ -1.51
VTI1B-202ENST00000553619 CLSTN2Q9H4D0 955 aa5.59□□□□□ -1.51
VTI1B-202ENST00000553619 ZNF576Q9H609 170 aa5.59□□□□□ -1.51
VTI1B-202ENST00000553619 TUFT1Q9NNX1 390 aa5.59□□□□□ -1.51
VTI1B-202ENST00000553619 FAM105AQ9NUU6 356 aa5.59□□□□□ -1.51
VTI1B-202ENST00000553619 COL20A1Q9P218 1284 aa5.59□□□□□ -1.51
VTI1B-202ENST00000553619 GPN3Q9UHW5 284 aaPredicted RBP5.59□□□□□ -1.51
VTI1B-202ENST00000553619 DNM3Q9UQ16 869 aa5.59□□□□□ -1.51
VTI1B-202ENST00000553619 SYNGAP1Q96PV0 1343 aa5.58□□□□□ -1.52
VTI1B-202ENST00000553619 A0A0G2JMZ2 1700 aa5.58□□□□□ -1.52
VTI1B-202ENST00000553619 TNPO2O14787 897 aaKnown RBP5.58□□□□□ -1.52
VTI1B-202ENST00000553619 NKRFO15226 690 aaKnown RBP eCLIP5.58□□□□□ -1.52
VTI1B-202ENST00000553619 B3GALT4O96024 378 aa5.58□□□□□ -1.52
VTI1B-202ENST00000553619 CCDC192P0DO97 292 aa5.58□□□□□ -1.52
VTI1B-202ENST00000553619 ITGB5P18084 799 aa5.58□□□□□ -1.52
VTI1B-202ENST00000553619 ITPKAP23677 461 aa5.58□□□□□ -1.52
VTI1B-202ENST00000553619 EDNRBP24530 442 aa5.58□□□□□ -1.52
VTI1B-202ENST00000553619 MRPS9P82933 396 aaKnown RBP5.58□□□□□ -1.52
VTI1B-202ENST00000553619 CYP27A1Q02318 531 aa5.58□□□□□ -1.52
VTI1B-202ENST00000553619 SP3Q02447 781 aa5.58□□□□□ -1.52
VTI1B-202ENST00000553619 MAP2K1Q02750 393 aaPredicted RBP5.58□□□□□ -1.52
VTI1B-202ENST00000553619 PPP2R3AQ06190 1150 aa5.58□□□□□ -1.52
VTI1B-202ENST00000553619 CRHR2Q13324 411 aa5.58□□□□□ -1.52
VTI1B-202ENST00000553619 GRB14Q14449 540 aa5.58□□□□□ -1.52
VTI1B-202ENST00000553619 IL17AQ16552 155 aa5.58□□□□□ -1.52
VTI1B-202ENST00000553619 CAMK4Q16566 473 aa5.58□□□□□ -1.52
VTI1B-202ENST00000553619 CT47A1Q5JQC4 288 aaPredicted RBP5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms