RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 ELAC1Q9H777 363 aaKnown RBP8.3□□□□□ -1.08
ATXN3-219ENST00000553488 PSTPIP2Q9H939 334 aa8.3□□□□□ -1.08
ATXN3-219ENST00000553488 KCNH7Q9NS40 1196 aa8.3□□□□□ -1.08
ATXN3-219ENST00000553488 TMEM161AQ9NX61 479 aa8.3□□□□□ -1.08
ATXN3-219ENST00000553488 ST3GAL5Q9UNP4 418 aa8.3□□□□□ -1.08
ATXN3-219ENST00000553488 PCDHB7Q9Y5E2 793 aa8.3□□□□□ -1.08
ATXN3-219ENST00000553488 HCFC2Q9Y5Z7 792 aa8.3□□□□□ -1.08
ATXN3-219ENST00000553488 CACNA1IQ9P0X4 2223 aa8.3□□□□□ -1.08
ATXN3-219ENST00000553488 ZFHX4Q86UP3 3567 aa8.3□□□□□ -1.08
ATXN3-219ENST00000553488 CFAP47Q6ZTR5 3102 aa8.29□□□□□ -1.08
ATXN3-219ENST00000553488 DENND3A2RUS2 1198 aa8.29□□□□□ -1.08
ATXN3-219ENST00000553488 RNF225M0QZC1 329 aaPredicted RBP8.29□□□□□ -1.08
ATXN3-219ENST00000553488 CCNE2O96020 404 aa8.29□□□□□ -1.08
ATXN3-219ENST00000553488 PBX3P40426 434 aa8.29□□□□□ -1.08
ATXN3-219ENST00000553488 STAT5BP51692 787 aa8.29□□□□□ -1.08
ATXN3-219ENST00000553488 COL9A3Q14050 684 aaPredicted RBP8.29□□□□□ -1.08
ATXN3-219ENST00000553488 SART3Q15020 963 aaKnown RBP8.29□□□□□ -1.08
ATXN3-219ENST00000553488 ERMP1Q7Z2K6 904 aa8.29□□□□□ -1.08
ATXN3-219ENST00000553488 FRMD5Q7Z6J6 570 aa8.29□□□□□ -1.08
ATXN3-219ENST00000553488 RALYLQ86SE5 291 aaKnown RBP8.29□□□□□ -1.08
ATXN3-219ENST00000553488 CCDC60Q8IWA6 550 aaPredicted RBP8.29□□□□□ -1.08
ATXN3-219ENST00000553488 NCOA7Q8NI08 942 aa8.29□□□□□ -1.08
ATXN3-219ENST00000553488 CTCFLQ8NI51 663 aaPredicted RBP8.29□□□□□ -1.08
ATXN3-219ENST00000553488 FEZF2Q8TBJ5 459 aa8.29□□□□□ -1.08
ATXN3-219ENST00000553488 CASP10Q92851 521 aa8.29□□□□□ -1.08
ATXN3-219ENST00000553488 SCARF2Q96GP6 870 aaPredicted RBP8.29□□□□□ -1.08
ATXN3-219ENST00000553488 NECTIN4Q96NY8 510 aa8.29□□□□□ -1.08
ATXN3-219ENST00000553488 CASD1Q96PB1 797 aa8.29□□□□□ -1.08
ATXN3-219ENST00000553488 OSMRQ99650 979 aa8.29□□□□□ -1.08
ATXN3-219ENST00000553488 MXRA8Q9BRK3 442 aa8.29□□□□□ -1.08
ATXN3-219ENST00000553488 TMEM117Q9H0C3 514 aa8.29□□□□□ -1.08
ATXN3-219ENST00000553488 ADAM7Q9H2U9 754 aa8.29□□□□□ -1.08
ATXN3-219ENST00000553488 NGRNQ9NPE2 291 aaKnown RBP8.29□□□□□ -1.08
ATXN3-219ENST00000553488 ENTPD7Q9NQZ7 604 aa8.29□□□□□ -1.08
ATXN3-219ENST00000553488 SEC63Q9UGP8 760 aaKnown RBP8.29□□□□□ -1.08
ATXN3-219ENST00000553488 PCDHA6Q9UN73 950 aa8.29□□□□□ -1.08
ATXN3-219ENST00000553488 NR2E1Q9Y466 385 aa8.29□□□□□ -1.08
ATXN3-219ENST00000553488 PCDHA8Q9Y5H6 950 aa8.29□□□□□ -1.08
ATXN3-219ENST00000553488 DNMT3AQ9Y6K1 912 aaPredicted RBP8.29□□□□□ -1.08
ATXN3-219ENST00000553488 COL1A2P08123 1366 aa8.29□□□□□ -1.08
ATXN3-219ENST00000553488 hCG_1642624A0A1W2PR95 340 aa8.28□□□□□ -1.08
ATXN3-219ENST00000553488 C2orf71A6NGG8 1288 aa8.28□□□□□ -1.08
ATXN3-219ENST00000553488 SPDYE3A6NKU9 549 aa8.28□□□□□ -1.08
ATXN3-219ENST00000553488 SH2B2O14492 632 aaPredicted RBP8.28□□□□□ -1.08
ATXN3-219ENST00000553488 GPR32O75388 356 aa8.28□□□□□ -1.08
ATXN3-219ENST00000553488 C22orf31O95567 290 aa8.28□□□□□ -1.08
ATXN3-219ENST00000553488 IGHDP01880 384 aa8.28□□□□□ -1.08
ATXN3-219ENST00000553488 ASGR2P07307 311 aa8.28□□□□□ -1.08
ATXN3-219ENST00000553488 KLRC1P26715 233 aa8.28□□□□□ -1.08
ATXN3-219ENST00000553488 KIF5BP33176 963 aa8.28□□□□□ -1.08
ATXN3-219ENST00000553488 PPM1AP35813 382 aa8.28□□□□□ -1.08
ATXN3-219ENST00000553488 SLC26A2P50443 739 aa8.28□□□□□ -1.08
ATXN3-219ENST00000553488 MARSP56192 900 aaKnown RBP8.28□□□□□ -1.08
ATXN3-219ENST00000553488 ITIH3Q06033 890 aa8.28□□□□□ -1.08
ATXN3-219ENST00000553488 HIF1AQ16665 826 aa8.28□□□□□ -1.08
ATXN3-219ENST00000553488 CLLU1OSQ5K130 101 aa8.28□□□□□ -1.08
ATXN3-219ENST00000553488 TMEM164Q5U3C3 297 aa8.28□□□□□ -1.08
ATXN3-219ENST00000553488 MCTP2Q6DN12 878 aa8.28□□□□□ -1.08
ATXN3-219ENST00000553488 KIAA1841Q6NSI8 718 aa8.28□□□□□ -1.08
ATXN3-219ENST00000553488 KCNT2Q6UVM3 1135 aa8.28□□□□□ -1.08
ATXN3-219ENST00000553488 ABHD15Q6UXT9 468 aa8.28□□□□□ -1.08
ATXN3-219ENST00000553488 BTLAQ7Z6A9 289 aa8.28□□□□□ -1.08
ATXN3-219ENST00000553488 CMTR1Q8N1G2 835 aaKnown RBP8.28□□□□□ -1.08
ATXN3-219ENST00000553488 SLC39A11Q8N1S5 342 aa8.28□□□□□ -1.08
ATXN3-219ENST00000553488 LRRC43Q8N309 656 aa8.28□□□□□ -1.08
ATXN3-219ENST00000553488 LINC01465Q8N7H1 131 aa8.28□□□□□ -1.08
ATXN3-219ENST00000553488 TNPO1Q92973 898 aaKnown RBP8.28□□□□□ -1.08
ATXN3-219ENST00000553488 CCDC97Q96F63 343 aaPredicted RBP8.28□□□□□ -1.08
ATXN3-219ENST00000553488 PPP1R16BQ96T49 567 aa8.28□□□□□ -1.08
ATXN3-219ENST00000553488 SLC30A3Q99726 388 aa8.28□□□□□ -1.08
ATXN3-219ENST00000553488 LZTS2Q9BRK4 669 aa8.28□□□□□ -1.08
ATXN3-219ENST00000553488 ATP6V0A4Q9HBG4 840 aa8.28□□□□□ -1.08
ATXN3-219ENST00000553488 AGO4Q9HCK5 861 aaKnown RBP8.28□□□□□ -1.08
ATXN3-219ENST00000553488 NEUROD4Q9HD90 331 aa8.28□□□□□ -1.08
ATXN3-219ENST00000553488 BRD7Q9NPI1 651 aa8.28□□□□□ -1.08
ATXN3-219ENST00000553488 GINS2Q9Y248 185 aa8.28□□□□□ -1.08
ATXN3-219ENST00000553488 DOCK6Q96HP0 2047 aa8.28□□□□□ -1.08
ATXN3-219ENST00000553488 MTCL1Q9Y4B5 1905 aaKnown RBP8.28□□□□□ -1.08
ATXN3-219ENST00000553488 CNTNAP5Q8WYK1 1306 aa8.28□□□□□ -1.08
ATXN3-219ENST00000553488 MIA3Q5JRA6 1907 aa8.27□□□□□ -1.09
ATXN3-219ENST00000553488 PATJQ8NI35 1801 aa8.27□□□□□ -1.09
ATXN3-219ENST00000553488 TGFBR3LH3BV60 316 aa8.27□□□□□ -1.09
ATXN3-219ENST00000553488 GPR182O15218 404 aa8.27□□□□□ -1.09
ATXN3-219ENST00000553488 HBP1O60381 514 aa8.27□□□□□ -1.09
ATXN3-219ENST00000553488 CLASP2O75122 1294 aaKnown RBP8.27□□□□□ -1.09
ATXN3-219ENST00000553488 WEE2P0C1S8 567 aa8.27□□□□□ -1.09
ATXN3-219ENST00000553488 NPR3P17342 541 aa8.27□□□□□ -1.09
ATXN3-219ENST00000553488 RXRAP19793 462 aa8.27□□□□□ -1.09
ATXN3-219ENST00000553488 ADH6P28332 368 aa8.27□□□□□ -1.09
ATXN3-219ENST00000553488 GRNP28799 593 aaKnown RBP8.27□□□□□ -1.09
ATXN3-219ENST00000553488 MTHFRP42898 656 aa8.27□□□□□ -1.09
ATXN3-219ENST00000553488 CLCN5P51795 746 aa8.27□□□□□ -1.09
ATXN3-219ENST00000553488 CRYBB1P53674 252 aaPredicted RBP8.27□□□□□ -1.09
ATXN3-219ENST00000553488 SNRPNP63162 240 aaKnown RBP8.27□□□□□ -1.09
ATXN3-219ENST00000553488 SMC1AQ14683 1233 aaKnown RBP8.27□□□□□ -1.09
ATXN3-219ENST00000553488 KIZQ2M2Z5 673 aa8.27□□□□□ -1.09
ATXN3-219ENST00000553488 CEP55Q53EZ4 464 aa8.27□□□□□ -1.09
ATXN3-219ENST00000553488 ODR4Q5SWX8 454 aa8.27□□□□□ -1.09
ATXN3-219ENST00000553488 WWC2Q6AWC2 1192 aa8.27□□□□□ -1.09
ATXN3-219ENST00000553488 TMTC3Q6ZXV5 915 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms