RNA–Protein interactions for RNA: ENST00000553444.1

HNRNPC-206, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-206ENST00000553444 PPME1Q9Y570 386 aa13.07□□□□□ -0.32
HNRNPC-206ENST00000553444 EML1O00423 815 aa13.06□□□□□ -0.32
HNRNPC-206ENST00000553444 NR1I2O75469 434 aa13.06□□□□□ -0.32
HNRNPC-206ENST00000553444 HMGB1P09429 215 aaKnown RBP13.06□□□□□ -0.32
HNRNPC-206ENST00000553444 RPL17P18621 184 aaKnown RBP13.06□□□□□ -0.32
HNRNPC-206ENST00000553444 RFC5P40937 340 aa13.06□□□□□ -0.32
HNRNPC-206ENST00000553444 MAGEA9P43362 315 aa13.06□□□□□ -0.32
HNRNPC-206ENST00000553444 NTHL1P78549 312 aa13.06□□□□□ -0.32
HNRNPC-206ENST00000553444 AKAP17AQ02040 695 aaKnown RBP13.06□□□□□ -0.32
HNRNPC-206ENST00000553444 CREMQ03060 361 aa13.06□□□□□ -0.32
HNRNPC-206ENST00000553444 LMNB2Q03252 620 aa13.06□□□□□ -0.32
HNRNPC-206ENST00000553444 CSTF1Q05048 431 aaKnown RBP13.06□□□□□ -0.32
HNRNPC-206ENST00000553444 UBXN2BQ14CS0 331 aa13.06□□□□□ -0.32
HNRNPC-206ENST00000553444 NTRK3Q16288 839 aa13.06□□□□□ -0.32
HNRNPC-206ENST00000553444 USP41Q3LFD5 358 aa13.06□□□□□ -0.32
HNRNPC-206ENST00000553444 SLC44A4Q53GD3 710 aa13.06□□□□□ -0.32
HNRNPC-206ENST00000553444 GRASPQ7Z6J2 395 aaPredicted RBP13.06□□□□□ -0.32
HNRNPC-206ENST00000553444 GLYCTKQ8IVS8 523 aa13.06□□□□□ -0.32
HNRNPC-206ENST00000553444 RNF149Q8NC42 400 aa13.06□□□□□ -0.32
HNRNPC-206ENST00000553444 ZBTB44Q8NCP5 570 aa13.06□□□□□ -0.32
HNRNPC-206ENST00000553444 ATRIPQ8WXE1 791 aa13.06□□□□□ -0.32
HNRNPC-206ENST00000553444 NELL1Q92832 810 aa13.06□□□□□ -0.32
HNRNPC-206ENST00000553444 CEP170P1Q96L14 293 aa13.06□□□□□ -0.32
HNRNPC-206ENST00000553444 RNF26Q9BY78 433 aaPredicted RBP13.06□□□□□ -0.32
HNRNPC-206ENST00000553444 C22orf23Q9BZE7 217 aa13.06□□□□□ -0.32
HNRNPC-206ENST00000553444 EPC1Q9H2F5 836 aa13.06□□□□□ -0.32
HNRNPC-206ENST00000553444 LTB4R2Q9NPC1 389 aa13.06□□□□□ -0.32
HNRNPC-206ENST00000553444 ZSCAN32Q9NX65 697 aa13.06□□□□□ -0.32
HNRNPC-206ENST00000553444 WRAP73Q9P2S5 460 aaPredicted RBP13.06□□□□□ -0.32
HNRNPC-206ENST00000553444 FBXW11Q9UKB1 542 aa13.06□□□□□ -0.32
HNRNPC-206ENST00000553444 SMG5Q9UPR3 1016 aaKnown RBP13.06□□□□□ -0.32
HNRNPC-206ENST00000553444 HES2Q9Y543 173 aa13.06□□□□□ -0.32
HNRNPC-206ENST00000553444 KMT2BQ9UMN6 2715 aaPredicted RBP13.06□□□□□ -0.32
HNRNPC-206ENST00000553444 CACNA1IQ9P0X4 2223 aa13.05□□□□□ -0.32
HNRNPC-206ENST00000553444 FAM170BA6NMN3 283 aa13.05□□□□□ -0.32
HNRNPC-206ENST00000553444 PRR5-ARHGAP8B1AHC4 643 aa13.05□□□□□ -0.32
HNRNPC-206ENST00000553444 TSPAN1O60635 241 aa13.05□□□□□ -0.32
HNRNPC-206ENST00000553444 LILRB5O75023 590 aa13.05□□□□□ -0.32
HNRNPC-206ENST00000553444 CPA1P15085 419 aa13.05□□□□□ -0.32
HNRNPC-206ENST00000553444 AXLP30530 894 aa13.05□□□□□ -0.32
HNRNPC-206ENST00000553444 QARSP47897 775 aaKnown RBP13.05□□□□□ -0.32
HNRNPC-206ENST00000553444 NLRP5P59047 1200 aa13.05□□□□□ -0.32
HNRNPC-206ENST00000553444 ARHGAP8P85298 464 aa13.05□□□□□ -0.32
HNRNPC-206ENST00000553444 FGD1P98174 961 aa13.05□□□□□ -0.32
HNRNPC-206ENST00000553444 NOTUMQ6P988 496 aa13.05□□□□□ -0.32
HNRNPC-206ENST00000553444 MOXD1Q6UVY6 613 aa13.05□□□□□ -0.32
HNRNPC-206ENST00000553444 RSPO2Q6UXX9 243 aaPredicted RBP13.05□□□□□ -0.32
HNRNPC-206ENST00000553444 MTSS1LQ765P7 747 aa13.05□□□□□ -0.32
HNRNPC-206ENST00000553444 FERMT3Q86UX7 667 aa13.05□□□□□ -0.32
HNRNPC-206ENST00000553444 EXOC8Q8IYI6 725 aa13.05□□□□□ -0.32
HNRNPC-206ENST00000553444 GSTCDQ8NEC7 633 aa13.05□□□□□ -0.32
HNRNPC-206ENST00000553444 BRF1Q92994 677 aa13.05□□□□□ -0.32
HNRNPC-206ENST00000553444 SLC26A6Q9BXS9 759 aa13.05□□□□□ -0.32
HNRNPC-206ENST00000553444 SH3GLB2Q9NR46 395 aa13.05□□□□□ -0.32
HNRNPC-206ENST00000553444 BMP2KQ9NSY1 1161 aaPredicted RBP13.05□□□□□ -0.32
HNRNPC-206ENST00000553444 ADAM28Q9UKQ2 775 aa13.05□□□□□ -0.32
HNRNPC-206ENST00000553444 CDV3Q9UKY7 258 aaKnown RBP13.05□□□□□ -0.32
HNRNPC-206ENST00000553444 GIT1Q9Y2X7 761 aa13.05□□□□□ -0.32
HNRNPC-206ENST00000553444 M0R2N6 131 aa13.04□□□□□ -0.32
HNRNPC-206ENST00000553444 ERLIN2O94905 339 aa13.04□□□□□ -0.32
HNRNPC-206ENST00000553444 HNRNPA1P09651 372 aaKnown RBP eCLIP13.04□□□□□ -0.32
HNRNPC-206ENST00000553444 IFNAR1P17181 557 aa13.04□□□□□ -0.32
HNRNPC-206ENST00000553444 TGM1P22735 817 aa13.04□□□□□ -0.32
HNRNPC-206ENST00000553444 HOXA9P31269 272 aa13.04□□□□□ -0.32
HNRNPC-206ENST00000553444 PTENP60484 403 aa13.04□□□□□ -0.32
HNRNPC-206ENST00000553444 PFKPQ01813 784 aa13.04□□□□□ -0.32
HNRNPC-206ENST00000553444 EMC2Q15006 297 aa13.04□□□□□ -0.32
HNRNPC-206ENST00000553444 PCBP1Q15365 356 aaKnown RBP eCLIP13.04□□□□□ -0.323e-6■■■□□ 15.1
HNRNPC-206ENST00000553444 RTP2Q5QGT7 225 aa13.04□□□□□ -0.32
HNRNPC-206ENST00000553444 Q6ZUG5 572 aa13.04□□□□□ -0.32
HNRNPC-206ENST00000553444 ITFG1Q8TB96 612 aa13.04□□□□□ -0.32
HNRNPC-206ENST00000553444 FGF13Q92913 245 aa13.04□□□□□ -0.32
HNRNPC-206ENST00000553444 SECISBP2LQ93073 1101 aaKnown RBP13.04□□□□□ -0.32
HNRNPC-206ENST00000553444 CLDN23Q96B33 292 aa13.04□□□□□ -0.32
HNRNPC-206ENST00000553444 CPB2Q96IY4 423 aa13.04□□□□□ -0.32
HNRNPC-206ENST00000553444 APOL6Q9BWW8 343 aa13.04□□□□□ -0.32
HNRNPC-206ENST00000553444 CSRNP2Q9H175 543 aa13.04□□□□□ -0.32
HNRNPC-206ENST00000553444 NXF3Q9H4D5 531 aaKnown RBP13.04□□□□□ -0.32
HNRNPC-206ENST00000553444 PRMT8Q9NR22 394 aaPredicted RBP13.04□□□□□ -0.32
HNRNPC-206ENST00000553444 VAV3Q9UKW4 847 aa13.04□□□□□ -0.32
HNRNPC-206ENST00000553444 PCDHA4Q9UN74 947 aa13.04□□□□□ -0.32
HNRNPC-206ENST00000553444 ASAP2O43150 1006 aa13.03□□□□□ -0.32
HNRNPC-206ENST00000553444 SLC37A4O43826 429 aa13.03□□□□□ -0.32
HNRNPC-206ENST00000553444 DKC1O60832 514 aaKnown RBP eCLIP13.03□□□□□ -0.32
HNRNPC-206ENST00000553444 P4HBP07237 508 aaKnown RBP13.03□□□□□ -0.32
HNRNPC-206ENST00000553444 CD72P21854 359 aa13.03□□□□□ -0.32
HNRNPC-206ENST00000553444 TARSP26639 723 aaKnown RBP13.03□□□□□ -0.32
HNRNPC-206ENST00000553444 PPP2R5CQ13362 524 aa13.03□□□□□ -0.32
HNRNPC-206ENST00000553444 AMHR2Q16671 573 aa13.03□□□□□ -0.32
HNRNPC-206ENST00000553444 LIN9Q5TKA1 542 aa13.03□□□□□ -0.32
HNRNPC-206ENST00000553444 PRSS55Q6UWB4 352 aaPredicted RBP13.03□□□□□ -0.32
HNRNPC-206ENST00000553444 IFNLR1Q8IU57 520 aaPredicted RBP13.03□□□□□ -0.32
HNRNPC-206ENST00000553444 TCP11Q8WWU5 503 aa13.03□□□□□ -0.32
HNRNPC-206ENST00000553444 RABGGTAQ92696 567 aa13.03□□□□□ -0.32
HNRNPC-206ENST00000553444 CLSTN3Q9BQT9 956 aa13.03□□□□□ -0.32
HNRNPC-206ENST00000553444 RTKNQ9BST9 563 aa13.03□□□□□ -0.32
HNRNPC-206ENST00000553444 PARD6AQ9NPB6 346 aa13.03□□□□□ -0.32
HNRNPC-206ENST00000553444 DDX25Q9UHL0 483 aaKnown RBP13.03□□□□□ -0.32
HNRNPC-206ENST00000553444 USP18Q9UMW8 372 aa13.03□□□□□ -0.32
HNRNPC-206ENST00000553444 CACNA1GO43497 2377 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms