RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 MIOSQ9NXC5 875 aa14.29□□□□□ -0.12
ACTN1-207ENST00000553290 HCFC2Q9Y5Z7 792 aa14.29□□□□□ -0.12
ACTN1-207ENST00000553290 TTLL13PA6NNM8 815 aa14.28□□□□□ -0.12
ACTN1-207ENST00000553290 SLC26A4O43511 780 aa14.28□□□□□ -0.12
ACTN1-207ENST00000553290 HIP1RO75146 1068 aa14.28□□□□□ -0.12
ACTN1-207ENST00000553290 LIG1P18858 919 aa14.28□□□□□ -0.12
ACTN1-207ENST00000553290 GRIK3Q13003 919 aa14.28□□□□□ -0.12
ACTN1-207ENST00000553290 PTPN14Q15678 1187 aa14.28□□□□□ -0.12
ACTN1-207ENST00000553290 ZRSR1Q15695 479 aaKnown RBP14.28□□□□□ -0.12
ACTN1-207ENST00000553290 SYCE2Q6PIF2 218 aa14.28□□□□□ -0.12
ACTN1-207ENST00000553290 PHLPP2Q6ZVD8 1323 aa14.28□□□□□ -0.12
ACTN1-207ENST00000553290 C1orf186Q6ZWK4 172 aa14.28□□□□□ -0.12
ACTN1-207ENST00000553290 KCNK18Q7Z418 384 aa14.28□□□□□ -0.12
ACTN1-207ENST00000553290 APBB1IPQ7Z5R6 666 aaPredicted RBP14.28□□□□□ -0.12
ACTN1-207ENST00000553290 PPFIBP1Q86W92 1011 aa14.28□□□□□ -0.12
ACTN1-207ENST00000553290 GSTCDQ8NEC7 633 aa14.28□□□□□ -0.12
ACTN1-207ENST00000553290 AUTS2Q8WXX7 1259 aa14.28□□□□□ -0.12
ACTN1-207ENST00000553290 CDK5RAP3Q96JB5 506 aa14.28□□□□□ -0.12
ACTN1-207ENST00000553290 AK8Q96MA6 479 aa14.28□□□□□ -0.12
ACTN1-207ENST00000553290 RPS6KC1Q96S38 1066 aa14.28□□□□□ -0.12
ACTN1-207ENST00000553290 PHF7Q9BWX1 381 aaPredicted RBP14.28□□□□□ -0.12
ACTN1-207ENST00000553290 S1PR5Q9H228 398 aa14.28□□□□□ -0.12
ACTN1-207ENST00000553290 C17orf75Q9HAS0 396 aa14.28□□□□□ -0.12
ACTN1-207ENST00000553290 SSX2IPQ9Y2D8 614 aa14.28□□□□□ -0.12
ACTN1-207ENST00000553290 PRG3Q9Y2Y8 225 aaPredicted RBP14.28□□□□□ -0.12
ACTN1-207ENST00000553290 VPS37CA5D8V6 355 aaPredicted RBP14.27□□□□□ -0.13
ACTN1-207ENST00000553290 CCDC169A6NNP5 214 aa14.27□□□□□ -0.13
ACTN1-207ENST00000553290 K7ERI5 159 aa14.27□□□□□ -0.13
ACTN1-207ENST00000553290 DCXO43602 365 aa14.27□□□□□ -0.13
ACTN1-207ENST00000553290 GPR37L1O60883 481 aa14.27□□□□□ -0.13
ACTN1-207ENST00000553290 SOD2P04179 222 aa14.27□□□□□ -0.13
ACTN1-207ENST00000553290 GUCY2CP25092 1073 aa14.27□□□□□ -0.13
ACTN1-207ENST00000553290 NPTX2P47972 431 aa14.27□□□□□ -0.13
ACTN1-207ENST00000553290 PEX3P56589 373 aa14.27□□□□□ -0.13
ACTN1-207ENST00000553290 ITIH3Q06033 890 aa14.27□□□□□ -0.13
ACTN1-207ENST00000553290 DMP1Q13316 513 aaPredicted RBP14.27□□□□□ -0.13
ACTN1-207ENST00000553290 DCAF4L1Q3SXM0 396 aa14.27□□□□□ -0.13
ACTN1-207ENST00000553290 TMEM31Q5JXX7 168 aa14.27□□□□□ -0.13
ACTN1-207ENST00000553290 DAW1Q8N136 415 aa14.27□□□□□ -0.13
ACTN1-207ENST00000553290 SYT2Q8N9I0 419 aaPredicted RBP14.27□□□□□ -0.13
ACTN1-207ENST00000553290 PNMA5Q96PV4 448 aa14.27□□□□□ -0.13
ACTN1-207ENST00000553290 KIFC3Q9BVG8 833 aa14.27□□□□□ -0.13
ACTN1-207ENST00000553290 RUSC1Q9BVN2 902 aa14.27□□□□□ -0.13
ACTN1-207ENST00000553290 COLEC11Q9BWP8 271 aa14.27□□□□□ -0.13
ACTN1-207ENST00000553290 EMILIN2Q9BXX0 1053 aa14.27□□□□□ -0.13
ACTN1-207ENST00000553290 TMEM134Q9H6X4 195 aa14.27□□□□□ -0.13
ACTN1-207ENST00000553290 MRPL17Q9NRX2 175 aaKnown RBP14.27□□□□□ -0.13
ACTN1-207ENST00000553290 DZANK1Q9NVP4 752 aa14.27□□□□□ -0.13
ACTN1-207ENST00000553290 MARCH5Q9NX47 278 aa14.27□□□□□ -0.13
ACTN1-207ENST00000553290 KCND2Q9NZV8 630 aa14.27□□□□□ -0.13
ACTN1-207ENST00000553290 KLK14Q9P0G3 267 aa14.27□□□□□ -0.13
ACTN1-207ENST00000553290 KCNG1Q9UIX4 513 aa14.27□□□□□ -0.13
ACTN1-207ENST00000553290 RBM19Q9Y4C8 960 aaKnown RBP14.27□□□□□ -0.13
ACTN1-207ENST00000553290 EDN1P05305 212 aa14.26□□□□□ -0.13
ACTN1-207ENST00000553290 URODP06132 367 aa14.26□□□□□ -0.13
ACTN1-207ENST00000553290 MAPK7Q13164 816 aa14.26□□□□□ -0.13
ACTN1-207ENST00000553290 CBX2Q14781 532 aaPredicted RBP14.26□□□□□ -0.13
ACTN1-207ENST00000553290 NT5DC1Q5TFE4 455 aa14.26□□□□□ -0.13
ACTN1-207ENST00000553290 ATF7IP2Q5U623 682 aa14.26□□□□□ -0.13
ACTN1-207ENST00000553290 EEF1DP3Q658K8 133 aa14.26□□□□□ -0.13
ACTN1-207ENST00000553290 CES5AQ6NT32 575 aa14.26□□□□□ -0.13
ACTN1-207ENST00000553290 CABP7Q86V35 215 aa14.26□□□□□ -0.13
ACTN1-207ENST00000553290 CALML4Q96GE6 196 aa14.26□□□□□ -0.13
ACTN1-207ENST00000553290 INTS4Q96HW7 963 aaKnown RBP14.26□□□□□ -0.13
ACTN1-207ENST00000553290 HERC2P3Q9BVR0 1158 aa14.26□□□□□ -0.13
ACTN1-207ENST00000553290 KMT5AQ9NQR1 393 aa14.26□□□□□ -0.13
ACTN1-207ENST00000553290 SNTG2Q9NY99 539 aa14.26□□□□□ -0.13
ACTN1-207ENST00000553290 ARHGAP28Q9P2N2 729 aa14.26□□□□□ -0.13
ACTN1-207ENST00000553290 TNFSF13BQ9Y275 285 aa14.26□□□□□ -0.13
ACTN1-207ENST00000553290 USP20Q9Y2K6 914 aa14.26□□□□□ -0.13
ACTN1-207ENST00000553290 LOC730098B7Z3J9 87 aa14.25□□□□□ -0.13
ACTN1-207ENST00000553290 LILRB3O75022 631 aa14.25□□□□□ -0.13
ACTN1-207ENST00000553290 RECQL4O94761 1208 aa14.25□□□□□ -0.13
ACTN1-207ENST00000553290 EFEMP2O95967 443 aa14.25□□□□□ -0.13
ACTN1-207ENST00000553290 SSBP05455 408 aaKnown RBP eCLIP14.25□□□□□ -0.13
ACTN1-207ENST00000553290 THP07101 528 aa14.25□□□□□ -0.13
ACTN1-207ENST00000553290 COL9A1P20849 921 aa14.25□□□□□ -0.13
ACTN1-207ENST00000553290 KLRC2P26717 231 aa14.25□□□□□ -0.13
ACTN1-207ENST00000553290 LONP1P36776 959 aaKnown RBP14.25□□□□□ -0.13
ACTN1-207ENST00000553290 UBA7P41226 1012 aa14.25□□□□□ -0.13
ACTN1-207ENST00000553290 TUSC3Q13454 348 aa14.25□□□□□ -0.13
ACTN1-207ENST00000553290 SF3A1Q15459 793 aaKnown RBP14.25□□□□□ -0.13
ACTN1-207ENST00000553290 TMEM119Q4V9L6 283 aa14.25□□□□□ -0.13
ACTN1-207ENST00000553290 RNF135Q8IUD6 432 aa14.25□□□□□ -0.13
ACTN1-207ENST00000553290 GPR65Q8IYL9 337 aa14.25□□□□□ -0.13
ACTN1-207ENST00000553290 RNF168Q8IYW5 571 aaPredicted RBP14.25□□□□□ -0.13
ACTN1-207ENST00000553290 SLC22A17Q8WUG5 538 aa14.25□□□□□ -0.13
ACTN1-207ENST00000553290 NECTIN4Q96NY8 510 aa14.25□□□□□ -0.13
ACTN1-207ENST00000553290 KLHL5Q96PQ7 755 aa14.25□□□□□ -0.13
ACTN1-207ENST00000553290 PLIN2Q99541 437 aa14.25□□□□□ -0.13
ACTN1-207ENST00000553290 NTPCRQ9BSD7 190 aaKnown RBP14.25□□□□□ -0.13
ACTN1-207ENST00000553290 LRFN3Q9BTN0 628 aa14.25□□□□□ -0.13
ACTN1-207ENST00000553290 APOL5Q9BWW9 433 aa14.25□□□□□ -0.13
ACTN1-207ENST00000553290 ADAM7Q9H2U9 754 aa14.25□□□□□ -0.13
ACTN1-207ENST00000553290 MYH11P35749 1972 aa14.25□□□□□ -0.13
ACTN1-207ENST00000553290 CNPP09543 421 aaKnown RBP14.24□□□□□ -0.13
ACTN1-207ENST00000553290 PLA2G4BP0C869 781 aa14.24□□□□□ -0.13
ACTN1-207ENST00000553290 PLS3P13797 630 aa14.24□□□□□ -0.13
ACTN1-207ENST00000553290 EPCAMP16422 314 aa14.24□□□□□ -0.13
ACTN1-207ENST00000553290 MTHFRP42898 656 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms