RNA–Protein interactions for RNA: ENST00000553278.1

SCFD1-208, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 795 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-208ENST00000553278 ABCF2Q9UG63 623 aa6.89□□□□□ -1.31
SCFD1-208ENST00000553278 FEZ2Q9UHY8 353 aaPredicted RBP6.89□□□□□ -1.31
SCFD1-208ENST00000553278 USP19O94966 1318 aa6.89□□□□□ -1.31
SCFD1-208ENST00000553278 RPTORQ8N122 1335 aa6.88□□□□□ -1.31
SCFD1-208ENST00000553278 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.88□□□□□ -1.31
SCFD1-208ENST00000553278 C1QTNF9BB2RNN3 333 aa6.88□□□□□ -1.31
SCFD1-208ENST00000553278 F8W031 263 aaPredicted RBP6.88□□□□□ -1.31
SCFD1-208ENST00000553278 AKR1B10O60218 316 aa6.88□□□□□ -1.31
SCFD1-208ENST00000553278 LRG1P02750 347 aa6.88□□□□□ -1.31
SCFD1-208ENST00000553278 HARSP12081 509 aaKnown RBP6.88□□□□□ -1.31
SCFD1-208ENST00000553278 PNLIPP16233 465 aa6.88□□□□□ -1.31
SCFD1-208ENST00000553278 SMARCA1P28370 1054 aa6.88□□□□□ -1.31
SCFD1-208ENST00000553278 MEF2AQ02078 507 aaPredicted RBP6.88□□□□□ -1.31
SCFD1-208ENST00000553278 SEPT2Q15019 361 aa6.88□□□□□ -1.31
SCFD1-208ENST00000553278 ARL13BQ3SXY8 428 aa6.88□□□□□ -1.31
SCFD1-208ENST00000553278 KHDC1Q4VXA5 237 aaKnown RBP6.88□□□□□ -1.31
SCFD1-208ENST00000553278 HYIQ5T013 277 aa6.88□□□□□ -1.31
SCFD1-208ENST00000553278 MAATS1Q7Z4T9 603 aa6.88□□□□□ -1.31
SCFD1-208ENST00000553278 FAM129CQ86XR2 697 aa6.88□□□□□ -1.31
SCFD1-208ENST00000553278 FAM126BQ8IXS8 530 aa6.88□□□□□ -1.31
SCFD1-208ENST00000553278 PPM1MQ96MI6 270 aa6.88□□□□□ -1.31
SCFD1-208ENST00000553278 PPP1R16BQ96T49 567 aa6.88□□□□□ -1.31
SCFD1-208ENST00000553278 EIF2AK1Q9BQI3 630 aaKnown RBP6.88□□□□□ -1.31
SCFD1-208ENST00000553278 INO80BQ9C086 356 aaPredicted RBP6.88□□□□□ -1.31
SCFD1-208ENST00000553278 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.88□□□□□ -1.31
SCFD1-208ENST00000553278 CALCOCO1Q9P1Z2 691 aa6.88□□□□□ -1.31
SCFD1-208ENST00000553278 CPA4Q9UI42 421 aa6.88□□□□□ -1.31
SCFD1-208ENST00000553278 FBXO2Q9UK22 296 aaPredicted RBP6.88□□□□□ -1.31
SCFD1-208ENST00000553278 PHF2O75151 1096 aa6.87□□□□□ -1.31
SCFD1-208ENST00000553278 PAPLNO95428 1278 aa6.87□□□□□ -1.31
SCFD1-208ENST00000553278 DHRS4L1P0CG22 281 aa6.87□□□□□ -1.31
SCFD1-208ENST00000553278 PFKPQ01813 784 aa6.87□□□□□ -1.31
SCFD1-208ENST00000553278 MAP3K12Q12852 859 aa6.87□□□□□ -1.31
SCFD1-208ENST00000553278 RAB39AQ14964 217 aa6.87□□□□□ -1.31
SCFD1-208ENST00000553278 DGKDQ16760 1214 aa6.87□□□□□ -1.31
SCFD1-208ENST00000553278 MPEG1Q2M385 716 aa6.87□□□□□ -1.31
SCFD1-208ENST00000553278 FKBP15Q5T1M5 1219 aa6.87□□□□□ -1.31
SCFD1-208ENST00000553278 VASNQ6EMK4 673 aa6.87□□□□□ -1.31
SCFD1-208ENST00000553278 GGT6Q6P531 493 aa6.87□□□□□ -1.31
SCFD1-208ENST00000553278 TEPPQ6URK8 271 aa6.87□□□□□ -1.31
SCFD1-208ENST00000553278 CYP26C1Q6V0L0 522 aa6.87□□□□□ -1.31
SCFD1-208ENST00000553278 GADL1Q6ZQY3 521 aa6.87□□□□□ -1.31
SCFD1-208ENST00000553278 NLRX1Q86UT6 975 aa6.87□□□□□ -1.31
SCFD1-208ENST00000553278 SESTD1Q86VW0 696 aa6.87□□□□□ -1.31
SCFD1-208ENST00000553278 RNF152Q8N8N0 203 aa6.87□□□□□ -1.31
SCFD1-208ENST00000553278 ZNF566Q969W8 418 aa6.87□□□□□ -1.31
SCFD1-208ENST00000553278 MSLNLQ96KJ4 702 aa6.87□□□□□ -1.31
SCFD1-208ENST00000553278 FDXACB1Q9BRP7 624 aaPredicted RBP6.87□□□□□ -1.31
SCFD1-208ENST00000553278 WDCPQ9H6R7 721 aa6.87□□□□□ -1.31
SCFD1-208ENST00000553278 TNFRSF12AQ9NP84 129 aa6.87□□□□□ -1.31
SCFD1-208ENST00000553278 PIH1D1Q9NWS0 290 aaKnown RBP6.87□□□□□ -1.31
SCFD1-208ENST00000553278 GPR160Q9UJ42 338 aa6.87□□□□□ -1.31
SCFD1-208ENST00000553278 RPS6KL1Q9Y6S9 549 aa6.87□□□□□ -1.31
SCFD1-208ENST00000553278 A0A1B0GVC2 190 aa6.86□□□□□ -1.31
SCFD1-208ENST00000553278 J3KRW8 73 aa6.86□□□□□ -1.31
SCFD1-208ENST00000553278 NCAM2O15394 837 aa6.86□□□□□ -1.31
SCFD1-208ENST00000553278 PSPNO60542 156 aa6.86□□□□□ -1.31
SCFD1-208ENST00000553278 MAFO75444 373 aaPredicted RBP6.86□□□□□ -1.31
SCFD1-208ENST00000553278 CNOT4O95628 575 aaKnown RBP6.86□□□□□ -1.31
SCFD1-208ENST00000553278 SYN1P17600 705 aa6.86□□□□□ -1.31
SCFD1-208ENST00000553278 ECHS1P30084 290 aa6.86□□□□□ -1.31
SCFD1-208ENST00000553278 ALDH9A1P49189 494 aa6.86□□□□□ -1.31
SCFD1-208ENST00000553278 SUMO3P55854 103 aaPredicted RBP6.86□□□□□ -1.31
SCFD1-208ENST00000553278 CNGB1Q14028 1251 aaPredicted RBP6.86□□□□□ -1.31
SCFD1-208ENST00000553278 NR1I3Q14994 352 aa6.86□□□□□ -1.31
SCFD1-208ENST00000553278 SLC35G1Q2M3R5 365 aa6.86□□□□□ -1.31
SCFD1-208ENST00000553278 SLC51AQ86UW1 340 aa6.86□□□□□ -1.31
SCFD1-208ENST00000553278 ZDHHC13Q8IUH4 622 aa6.86□□□□□ -1.31
SCFD1-208ENST00000553278 LILRA2Q8N149 483 aa6.86□□□□□ -1.31
SCFD1-208ENST00000553278 TXLNBQ8N3L3 684 aa6.86□□□□□ -1.31
SCFD1-208ENST00000553278 OR5AN1Q8NGI8 311 aa6.86□□□□□ -1.31
SCFD1-208ENST00000553278 BRIX1Q8TDN6 353 aaKnown RBP6.86□□□□□ -1.31
SCFD1-208ENST00000553278 DDX11Q96FC9 970 aa6.86□□□□□ -1.31
SCFD1-208ENST00000553278 TSPAN17Q96FV3 270 aa6.86□□□□□ -1.31
SCFD1-208ENST00000553278 RMDN3Q96TC7 470 aa6.86□□□□□ -1.31
SCFD1-208ENST00000553278 VRK1Q99986 396 aaPredicted RBP6.86□□□□□ -1.31
SCFD1-208ENST00000553278 TMEM120AQ9BXJ8 343 aa6.86□□□□□ -1.31
SCFD1-208ENST00000553278 KRTAP9-2Q9BYQ4 174 aa6.86□□□□□ -1.31
SCFD1-208ENST00000553278 SERHLQ9NQF3 203 aa6.86□□□□□ -1.31
SCFD1-208ENST00000553278 PDP2Q9P2J9 529 aa6.86□□□□□ -1.31
SCFD1-208ENST00000553278 CPNE7Q9UBL6 633 aa6.86□□□□□ -1.31
SCFD1-208ENST00000553278 A0A1W2PPC4 97 aa6.85□□□□□ -1.31
SCFD1-208ENST00000553278 GOLGA6L3A6NEY3 463 aa6.85□□□□□ -1.31
SCFD1-208ENST00000553278 F8W8V4 182 aa6.85□□□□□ -1.31
SCFD1-208ENST00000553278 RHOBTB3O94955 611 aa6.85□□□□□ -1.31
SCFD1-208ENST00000553278 FTH1P19P0C7X4 201 aa6.85□□□□□ -1.31
SCFD1-208ENST00000553278 NPR1P16066 1061 aa6.85□□□□□ -1.31
SCFD1-208ENST00000553278 EN2P19622 333 aaPredicted RBP6.85□□□□□ -1.31
SCFD1-208ENST00000553278 TNFAIP3P21580 790 aa6.85□□□□□ -1.31
SCFD1-208ENST00000553278 CTSSP25774 331 aa6.85□□□□□ -1.31
SCFD1-208ENST00000553278 EEF1GP26641 437 aaKnown RBP6.85□□□□□ -1.31
SCFD1-208ENST00000553278 PDIA3P30101 505 aaKnown RBP6.85□□□□□ -1.31
SCFD1-208ENST00000553278 CD96P40200 585 aa6.85□□□□□ -1.31
SCFD1-208ENST00000553278 BNIP3Q12983 259 aa6.85□□□□□ -1.31
SCFD1-208ENST00000553278 PRKG1Q13976 671 aa6.85□□□□□ -1.31
SCFD1-208ENST00000553278 TAF12Q16514 161 aa6.85□□□□□ -1.31
SCFD1-208ENST00000553278 MAN2A1Q16706 1144 aa6.85□□□□□ -1.31
SCFD1-208ENST00000553278 ZACNQ401N2 412 aa6.85□□□□□ -1.31
SCFD1-208ENST00000553278 KHDC1LQ5JSQ8 128 aa6.85□□□□□ -1.31
SCFD1-208ENST00000553278 KLHDC7AQ5VTJ3 777 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms