RNA–Protein interactions for RNA: ENST00000553192.5

SNRPF-205, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 4 BASIC

Gene SNRPF, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-205ENST00000553192 PRSS55Q6UWB4 352 aaPredicted RBP13.27□□□□□ -0.29
SNRPF-205ENST00000553192 CWC27Q6UX04 472 aaKnown RBP13.27□□□□□ -0.29
SNRPF-205ENST00000553192 PDZD3Q86UT5 571 aa13.27□□□□□ -0.29
SNRPF-205ENST00000553192 MCRS1Q96EZ8 462 aa13.27□□□□□ -0.29
SNRPF-205ENST00000553192 KIF12Q96FN5 646 aa13.27□□□□□ -0.29
SNRPF-205ENST00000553192 RBM12Q9NTZ6 932 aaKnown RBP13.27□□□□□ -0.29
SNRPF-205ENST00000553192 MIOSQ9NXC5 875 aa13.27□□□□□ -0.29
SNRPF-205ENST00000553192 KCNH3Q9ULD8 1083 aa13.27□□□□□ -0.29
SNRPF-205ENST00000553192 POLIQ9UNA4 740 aa13.27□□□□□ -0.29
SNRPF-205ENST00000553192 GPSM3Q9Y4H4 160 aa13.27□□□□□ -0.29
SNRPF-205ENST00000553192 BPTFQ12830 3046 aa13.27□□□□□ -0.29
SNRPF-205ENST00000553192 COL4A2P08572 1712 aa13.27□□□□□ -0.29
SNRPF-205ENST00000553192 IGLV3-22A0A075B6J6 115 aa13.26□□□□□ -0.29
SNRPF-205ENST00000553192 HOXA6P31267 233 aa13.26□□□□□ -0.29
SNRPF-205ENST00000553192 PTGDRQ13258 359 aa13.26□□□□□ -0.29
SNRPF-205ENST00000553192 TARBP2Q15633 366 aaKnown RBP13.26□□□□□ -0.29
SNRPF-205ENST00000553192 SLC5A9Q2M3M2 681 aa13.26□□□□□ -0.29
SNRPF-205ENST00000553192 RTP2Q5QGT7 225 aa13.26□□□□□ -0.29
SNRPF-205ENST00000553192 PPM1LQ5SGD2 360 aa13.26□□□□□ -0.29
SNRPF-205ENST00000553192 TYW1BQ6NUM6 668 aa13.26□□□□□ -0.29
SNRPF-205ENST00000553192 ZNF746Q6NUN9 644 aaPredicted RBP13.26□□□□□ -0.29
SNRPF-205ENST00000553192 FUT10Q6P4F1 479 aa13.26□□□□□ -0.29
SNRPF-205ENST00000553192 C19orf48Q6RUI8 117 aa13.26□□□□□ -0.29
SNRPF-205ENST00000553192 Q6ZS52 159 aa13.26□□□□□ -0.29
SNRPF-205ENST00000553192 NIPA1Q7RTP0 329 aa13.26□□□□□ -0.29
SNRPF-205ENST00000553192 CATIPQ7Z7H3 387 aa13.26□□□□□ -0.29
SNRPF-205ENST00000553192 KBTBD6Q86V97 674 aa13.26□□□□□ -0.29
SNRPF-205ENST00000553192 WDR5BQ86VZ2 330 aa13.26□□□□□ -0.29
SNRPF-205ENST00000553192 MAP4K3Q8IVH8 894 aa13.26□□□□□ -0.29
SNRPF-205ENST00000553192 RILPL2Q969X0 211 aa13.26□□□□□ -0.29
SNRPF-205ENST00000553192 ELSPBP1Q96BH3 223 aa13.26□□□□□ -0.29
SNRPF-205ENST00000553192 CEP89Q96ST8 783 aa13.26□□□□□ -0.29
SNRPF-205ENST00000553192 MAP3K14Q99558 947 aa13.26□□□□□ -0.29
SNRPF-205ENST00000553192 CLSTN3Q9BQT9 956 aa13.26□□□□□ -0.29
SNRPF-205ENST00000553192 ANO3Q9BYT9 981 aa13.26□□□□□ -0.29
SNRPF-205ENST00000553192 IL25Q9H293 177 aa13.26□□□□□ -0.29
SNRPF-205ENST00000553192 CNTNAP2Q9UHC6 1331 aa13.26□□□□□ -0.29
SNRPF-205ENST00000553192 NAV2Q8IVL1 2488 aa13.25□□□□□ -0.29
SNRPF-205ENST00000553192 C4orf47A7E2U8 309 aa13.25□□□□□ -0.29
SNRPF-205ENST00000553192 IPO5O00410 1097 aaKnown RBP13.25□□□□□ -0.29
SNRPF-205ENST00000553192 OATP04181 439 aa13.25□□□□□ -0.29
SNRPF-205ENST00000553192 ANTXR2P58335 489 aa13.25□□□□□ -0.29
SNRPF-205ENST00000553192 UGCGQ16739 394 aa13.25□□□□□ -0.29
SNRPF-205ENST00000553192 USP41Q3LFD5 358 aa13.25□□□□□ -0.29
SNRPF-205ENST00000553192 PABPC1LQ4VXU2 614 aaKnown RBP13.25□□□□□ -0.29
SNRPF-205ENST00000553192 CATSPER4Q7RTX7 472 aa13.25□□□□□ -0.29
SNRPF-205ENST00000553192 PLA2G4DQ86XP0 818 aa13.25□□□□□ -0.29
SNRPF-205ENST00000553192 ADAM32Q8TC27 787 aa13.25□□□□□ -0.29
SNRPF-205ENST00000553192 IGDCC4Q8TDY8 1250 aa13.25□□□□□ -0.29
SNRPF-205ENST00000553192 FAM167AQ96KS9 214 aa13.25□□□□□ -0.29
SNRPF-205ENST00000553192 BRD9Q9H8M2 597 aa13.25□□□□□ -0.29
SNRPF-205ENST00000553192 ZNF334Q9HCZ1 680 aaPredicted RBP13.25□□□□□ -0.29
SNRPF-205ENST00000553192 AGPAT5Q9NUQ2 364 aa13.25□□□□□ -0.29
SNRPF-205ENST00000553192 PCDHA10Q9Y5I2 948 aa13.25□□□□□ -0.29
SNRPF-205ENST00000553192 TAF6LQ9Y6J9 622 aa13.25□□□□□ -0.29
SNRPF-205ENST00000553192 PIAS3Q9Y6X2 628 aa13.25□□□□□ -0.29
SNRPF-205ENST00000553192 LAMA1P25391 3075 aa13.25□□□□□ -0.29
SNRPF-205ENST00000553192 FREM2Q5SZK8 3169 aa13.24□□□□□ -0.29
SNRPF-205ENST00000553192 ADAMTS20P59510 1910 aa13.24□□□□□ -0.29
SNRPF-205ENST00000553192 IGKV6-21A0A0C4DH24 114 aa13.24□□□□□ -0.29
SNRPF-205ENST00000553192 ADAM12O43184 909 aa13.24□□□□□ -0.29
SNRPF-205ENST00000553192 HYAL3O43820 417 aaPredicted RBP13.24□□□□□ -0.29
SNRPF-205ENST00000553192 PSAPP07602 524 aa13.24□□□□□ -0.29
SNRPF-205ENST00000553192 POU2F2P09086 479 aa13.24□□□□□ -0.29
SNRPF-205ENST00000553192 CCNE1P24864 410 aa13.24□□□□□ -0.29
SNRPF-205ENST00000553192 HOXA11P31270 313 aaPredicted RBP13.24□□□□□ -0.29
SNRPF-205ENST00000553192 SREBF1P36956 1147 aa13.24□□□□□ -0.29
SNRPF-205ENST00000553192 MPLP40238 635 aa13.24□□□□□ -0.29
SNRPF-205ENST00000553192 HNRNPUQ00839 825 aaKnown RBP eCLIP13.24□□□□□ -0.29
SNRPF-205ENST00000553192 LIN9Q5TKA1 542 aa13.24□□□□□ -0.29
SNRPF-205ENST00000553192 KIAA1211LQ6NV74 962 aa13.24□□□□□ -0.29
SNRPF-205ENST00000553192 KSR1Q8IVT5 923 aa13.24□□□□□ -0.29
SNRPF-205ENST00000553192 SMAP1Q8IYB5 467 aaPredicted RBP13.24□□□□□ -0.29
SNRPF-205ENST00000553192 ZNF654Q8IZM8 581 aa13.24□□□□□ -0.29
SNRPF-205ENST00000553192 SMG8Q8ND04 991 aaKnown RBP13.24□□□□□ -0.29
SNRPF-205ENST00000553192 CTCFLQ8NI51 663 aaPredicted RBP13.24□□□□□ -0.29
SNRPF-205ENST00000553192 GAB3Q8WWW8 586 aa13.24□□□□□ -0.29
SNRPF-205ENST00000553192 RABGGTAQ92696 567 aa13.24□□□□□ -0.29
SNRPF-205ENST00000553192 GAD1Q99259 594 aa13.24□□□□□ -0.29
SNRPF-205ENST00000553192 EDEM2Q9BV94 578 aa13.24□□□□□ -0.29
SNRPF-205ENST00000553192 RNF39Q9H2S5 420 aa13.24□□□□□ -0.29
SNRPF-205ENST00000553192 TRPV5Q9NQA5 729 aa13.24□□□□□ -0.29
SNRPF-205ENST00000553192 GDE1Q9NZC3 331 aa13.24□□□□□ -0.29
SNRPF-205ENST00000553192 MRPS23Q9Y3D9 190 aaKnown RBP13.24□□□□□ -0.29
SNRPF-205ENST00000553192 NEUROG3Q9Y4Z2 214 aa13.24□□□□□ -0.29
SNRPF-205ENST00000553192 PCDHGA5Q9Y5G8 931 aa13.24□□□□□ -0.29
SNRPF-205ENST00000553192 ERICH2A1L162 156 aa13.23□□□□□ -0.29
SNRPF-205ENST00000553192 XYLBO75191 536 aa13.23□□□□□ -0.29
SNRPF-205ENST00000553192 CEACAM1P13688 526 aa13.23□□□□□ -0.29
SNRPF-205ENST00000553192 CEBPBP17676 345 aa13.23□□□□□ -0.29
SNRPF-205ENST00000553192 SCNN1GP51170 649 aa13.23□□□□□ -0.29
SNRPF-205ENST00000553192 PRKCEQ02156 737 aa13.23□□□□□ -0.29
SNRPF-205ENST00000553192 CREMQ03060 361 aa13.23□□□□□ -0.29
SNRPF-205ENST00000553192 ANKRD45Q5TZF3 282 aa13.23□□□□□ -0.29
SNRPF-205ENST00000553192 CACNA2D4Q7Z3S7 1137 aa13.23□□□□□ -0.29
SNRPF-205ENST00000553192 ZNF410Q86VK4 478 aa13.23□□□□□ -0.29
SNRPF-205ENST00000553192 PROSER1Q86XN7 944 aa13.23□□□□□ -0.29
SNRPF-205ENST00000553192 SLC7A14Q8TBB6 771 aa13.23□□□□□ -0.29
SNRPF-205ENST00000553192 CRYGNQ8WXF5 182 aa13.23□□□□□ -0.29
SNRPF-205ENST00000553192 ZFP42Q96MM3 310 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms