RNA–Protein interactions for RNA: ENST00000551716.5

CACNB3-220, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-220ENST00000551716 COL4A3BPQ9Y5P4 624 aa17.12■□□□□ 0.33
CACNB3-220ENST00000551716 DOCK8Q8NF50 2099 aa17.12■□□□□ 0.33
CACNB3-220ENST00000551716 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.11■□□□□ 0.33
CACNB3-220ENST00000551716 CD72P21854 359 aa17.11■□□□□ 0.33
CACNB3-220ENST00000551716 HOXA9P31269 272 aa17.11■□□□□ 0.33
CACNB3-220ENST00000551716 UBXN11Q5T124 520 aa17.11■□□□□ 0.33
CACNB3-220ENST00000551716 TSSK4Q6SA08 328 aa17.11■□□□□ 0.33
CACNB3-220ENST00000551716 HACE1Q8IYU2 909 aa17.11■□□□□ 0.33
CACNB3-220ENST00000551716 ST13P5Q8NFI4 369 aaPredicted RBP17.11■□□□□ 0.33
CACNB3-220ENST00000551716 SLC7A3Q8WY07 619 aa17.11■□□□□ 0.33
CACNB3-220ENST00000551716 CCDC51Q96ER9 411 aa17.11■□□□□ 0.33
CACNB3-220ENST00000551716 CCDC136Q96JN2 1154 aa17.11■□□□□ 0.33
CACNB3-220ENST00000551716 UNC45AQ9H3U1 944 aa17.11■□□□□ 0.33
CACNB3-220ENST00000551716 KCNH3Q9ULD8 1083 aa17.11■□□□□ 0.33
CACNB3-220ENST00000551716 PPME1Q9Y570 386 aa17.11■□□□□ 0.33
CACNB3-220ENST00000551716 CCDC196A0A1B0GTZ2 297 aa17.1■□□□□ 0.33
CACNB3-220ENST00000551716 MAN2B1O00754 1011 aa17.1■□□□□ 0.33
CACNB3-220ENST00000551716 SLC27A2O14975 620 aa17.1■□□□□ 0.33
CACNB3-220ENST00000551716 ASAP2O43150 1006 aa17.1■□□□□ 0.33
CACNB3-220ENST00000551716 STBD1O95210 358 aa17.1■□□□□ 0.33
CACNB3-220ENST00000551716 POU2F2P09086 479 aa17.1■□□□□ 0.33
CACNB3-220ENST00000551716 TARSP26639 723 aaKnown RBP17.1■□□□□ 0.33
CACNB3-220ENST00000551716 AXLP30530 894 aa17.1■□□□□ 0.33
CACNB3-220ENST00000551716 RCAN1P53805 252 aa17.1■□□□□ 0.33
CACNB3-220ENST00000551716 PPM1LQ5SGD2 360 aa17.1■□□□□ 0.33
CACNB3-220ENST00000551716 FUT10Q6P4F1 479 aa17.1■□□□□ 0.33
CACNB3-220ENST00000551716 TPRG1Q6ZUI0 275 aa17.1■□□□□ 0.33
CACNB3-220ENST00000551716 RTL10Q7L3V2 364 aa17.1■□□□□ 0.33
CACNB3-220ENST00000551716 GAD1Q99259 594 aa17.1■□□□□ 0.33
CACNB3-220ENST00000551716 FBXW11Q9UKB1 542 aa17.1■□□□□ 0.33
CACNB3-220ENST00000551716 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.1■□□□□ 0.33
CACNB3-220ENST00000551716 BAHCC1Q9P281 2608 aa17.09■□□□□ 0.33
CACNB3-220ENST00000551716 DKC1O60832 514 aaKnown RBP eCLIP17.09■□□□□ 0.33
CACNB3-220ENST00000551716 TADA2AO75478 443 aa17.09■□□□□ 0.33
CACNB3-220ENST00000551716 ECI2O75521 394 aa17.09■□□□□ 0.33
CACNB3-220ENST00000551716 SRGAP2CP0DJJ0 459 aa17.09■□□□□ 0.33
CACNB3-220ENST00000551716 MTAPQ13126 283 aa17.09■□□□□ 0.33
CACNB3-220ENST00000551716 COL9A3Q14050 684 aaPredicted RBP17.09■□□□□ 0.33
CACNB3-220ENST00000551716 CSRP2Q16527 193 aa17.09■□□□□ 0.33
CACNB3-220ENST00000551716 UVSSAQ2YD98 709 aa17.09■□□□□ 0.33
CACNB3-220ENST00000551716 GLYCTKQ8IVS8 523 aa17.09■□□□□ 0.33
CACNB3-220ENST00000551716 SMG8Q8ND04 991 aaKnown RBP17.09■□□□□ 0.33
CACNB3-220ENST00000551716 PRPF31Q8WWY3 499 aaKnown RBP17.09■□□□□ 0.33
CACNB3-220ENST00000551716 PSPC1Q8WXF1 523 aaKnown RBP17.09■□□□□ 0.33
CACNB3-220ENST00000551716 GPR62Q9BZJ7 368 aa17.09■□□□□ 0.33
CACNB3-220ENST00000551716 ADAM28Q9UKQ2 775 aa17.09■□□□□ 0.33
CACNB3-220ENST00000551716 GIT1Q9Y2X7 761 aa17.09■□□□□ 0.33
CACNB3-220ENST00000551716 IPPQ9Y573 584 aa17.09■□□□□ 0.33
CACNB3-220ENST00000551716 GOLGA8AA7E2F4 631 aa17.08■□□□□ 0.32
CACNB3-220ENST00000551716 GOLGA8BA8MQT2 603 aa17.08■□□□□ 0.32
CACNB3-220ENST00000551716 PSMD10O75832 226 aa17.08■□□□□ 0.32
CACNB3-220ENST00000551716 ERLIN2O94905 339 aa17.08■□□□□ 0.32
CACNB3-220ENST00000551716 MLH1P40692 756 aa17.08■□□□□ 0.32
CACNB3-220ENST00000551716 PSMC5P62195 406 aa17.08■□□□□ 0.32
CACNB3-220ENST00000551716 RNF20Q5VTR2 975 aa17.08■□□□□ 0.32
CACNB3-220ENST00000551716 CREB3L3Q68CJ9 461 aa17.08■□□□□ 0.32
CACNB3-220ENST00000551716 NOTUMQ6P988 496 aa17.08■□□□□ 0.32
CACNB3-220ENST00000551716 PDXDC1Q6P996 788 aa17.08■□□□□ 0.32
CACNB3-220ENST00000551716 TCP11Q8WWU5 503 aa17.08■□□□□ 0.32
CACNB3-220ENST00000551716 DNASE1L2Q92874 299 aa17.08■□□□□ 0.32
CACNB3-220ENST00000551716 B3GALT6Q96L58 329 aa17.08■□□□□ 0.32
CACNB3-220ENST00000551716 KXD1Q9BQD3 176 aa17.08■□□□□ 0.32
CACNB3-220ENST00000551716 SEMA4GQ9NTN9 838 aa17.08■□□□□ 0.32
CACNB3-220ENST00000551716 GDE1Q9NZC3 331 aa17.08■□□□□ 0.32
CACNB3-220ENST00000551716 POLIQ9UNA4 740 aa17.08■□□□□ 0.32
CACNB3-220ENST00000551716 SF3B1O75533 1304 aaKnown RBP eCLIP17.07■□□□□ 0.32
CACNB3-220ENST00000551716 TMEM150BA6NC51 233 aa17.07■□□□□ 0.32
CACNB3-220ENST00000551716 C8AP07357 584 aa17.07■□□□□ 0.32
CACNB3-220ENST00000551716 RPL17P18621 184 aaKnown RBP17.07■□□□□ 0.32
CACNB3-220ENST00000551716 CNR2P34972 360 aa17.07■□□□□ 0.32
CACNB3-220ENST00000551716 SCNN1GP51170 649 aa17.07■□□□□ 0.32
CACNB3-220ENST00000551716 CCR3P51677 355 aa17.07■□□□□ 0.32
CACNB3-220ENST00000551716 SHC2P98077 582 aa17.07■□□□□ 0.32
CACNB3-220ENST00000551716 LAMTOR4Q0VGL1 99 aa17.07■□□□□ 0.32
CACNB3-220ENST00000551716 FZD5Q13467 585 aa17.07■□□□□ 0.32
CACNB3-220ENST00000551716 NECTIN1Q15223 517 aa17.07■□□□□ 0.32
CACNB3-220ENST00000551716 ANO5Q75V66 913 aa17.07■□□□□ 0.32
CACNB3-220ENST00000551716 SH2D3AQ9BRG2 576 aa17.07■□□□□ 0.32
CACNB3-220ENST00000551716 C22orf23Q9BZE7 217 aa17.07■□□□□ 0.32
CACNB3-220ENST00000551716 CHRDQ9H2X0 955 aa17.07■□□□□ 0.32
CACNB3-220ENST00000551716 BRPF3Q9ULD4 1205 aa17.07■□□□□ 0.32
CACNB3-220ENST00000551716 MIA3Q5JRA6 1907 aa17.07■□□□□ 0.32
CACNB3-220ENST00000551716 FAM208BQ5VWN6 2430 aa17.07■□□□□ 0.32
CACNB3-220ENST00000551716 RFC5P40937 340 aa17.06■□□□□ 0.32
CACNB3-220ENST00000551716 NTHL1P78549 312 aa17.06■□□□□ 0.32
CACNB3-220ENST00000551716 SIM2Q14190 667 aaPredicted RBP17.06■□□□□ 0.32
CACNB3-220ENST00000551716 Q4G0T1 1027 aa17.06■□□□□ 0.32
CACNB3-220ENST00000551716 IL31Q6EBC2 164 aa17.06■□□□□ 0.32
CACNB3-220ENST00000551716 PRR23CQ6ZRP0 262 aa17.06■□□□□ 0.32
CACNB3-220ENST00000551716 PRR23BQ6ZRT6 265 aa17.06■□□□□ 0.32
CACNB3-220ENST00000551716 DHX32Q7L7V1 743 aaKnown RBP17.06■□□□□ 0.32
CACNB3-220ENST00000551716 CCDC148Q8NFR7 591 aa17.06■□□□□ 0.32
CACNB3-220ENST00000551716 ITFG1Q8TB96 612 aa17.06■□□□□ 0.32
CACNB3-220ENST00000551716 ZFP42Q96MM3 310 aa17.06■□□□□ 0.32
CACNB3-220ENST00000551716 TTPALQ9BTX7 342 aa17.06■□□□□ 0.32
CACNB3-220ENST00000551716 TRIM6Q9C030 488 aaPredicted RBP17.06■□□□□ 0.32
CACNB3-220ENST00000551716 LSG1Q9H089 658 aaKnown RBP17.06■□□□□ 0.32
CACNB3-220ENST00000551716 RNF39Q9H2S5 420 aa17.06■□□□□ 0.32
CACNB3-220ENST00000551716 MINDY3Q9H8M7 445 aa17.06■□□□□ 0.32
CACNB3-220ENST00000551716 MIOSQ9NXC5 875 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms