RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 PAK6Q9NQU5 681 aaPredicted RBP2.96□□□□□ -1.94
CPSF6-207ENST00000551516 PDLIM7Q9NR12 457 aa2.96□□□□□ -1.94
CPSF6-207ENST00000551516 CWC25Q9NXE8 425 aaPredicted RBP2.96□□□□□ -1.94
CPSF6-207ENST00000551516 IMPACTQ9P2X3 320 aa2.96□□□□□ -1.94
CPSF6-207ENST00000551516 ZNF70Q9UC06 446 aaPredicted RBP2.96□□□□□ -1.94
CPSF6-207ENST00000551516 EBF1Q9UH73 591 aa2.96□□□□□ -1.94
CPSF6-207ENST00000551516 GJD2Q9UKL4 321 aa2.96□□□□□ -1.94
CPSF6-207ENST00000551516 ACSL6Q9UKU0 697 aa2.96□□□□□ -1.94
CPSF6-207ENST00000551516 CBLCQ9ULV8 474 aa2.96□□□□□ -1.94
CPSF6-207ENST00000551516 MAP3K2Q9Y2U5 619 aa2.96□□□□□ -1.94
CPSF6-207ENST00000551516 SPEF1Q9Y4P9 236 aa2.96□□□□□ -1.94
CPSF6-207ENST00000551516 RBBP6Q7Z6E9 1792 aaKnown RBP2.96□□□□□ -1.94
CPSF6-207ENST00000551516 BDP1A6H8Y1 2624 aa2.96□□□□□ -1.94
CPSF6-207ENST00000551516 MYO3BQ8WXR4 1341 aa2.95□□□□□ -1.94
CPSF6-207ENST00000551516 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP2.95□□□□□ -1.94
CPSF6-207ENST00000551516 SCDO00767 359 aa2.95□□□□□ -1.94
CPSF6-207ENST00000551516 APAF1O14727 1248 aa2.95□□□□□ -1.94
CPSF6-207ENST00000551516 HGSO14964 777 aaPredicted RBP2.95□□□□□ -1.94
CPSF6-207ENST00000551516 NKRFO15226 690 aaKnown RBP eCLIP2.95□□□□□ -1.946e-9■□□□□ 11.2
CPSF6-207ENST00000551516 CLASP2O75122 1294 aaKnown RBP2.95□□□□□ -1.94
CPSF6-207ENST00000551516 TAF5LO75529 589 aa2.95□□□□□ -1.94
CPSF6-207ENST00000551516 PARNO95453 639 aaKnown RBP2.95□□□□□ -1.94
CPSF6-207ENST00000551516 WNT11O96014 354 aa2.95□□□□□ -1.94
CPSF6-207ENST00000551516 NTRK1P04629 796 aa2.95□□□□□ -1.94
CPSF6-207ENST00000551516 GJB1P08034 283 aa2.95□□□□□ -1.94
CPSF6-207ENST00000551516 COL6A1P12109 1028 aa2.95□□□□□ -1.94
CPSF6-207ENST00000551516 ATP2A2P16615 1042 aaKnown RBP2.95□□□□□ -1.94
CPSF6-207ENST00000551516 FUT4P22083 530 aa2.95□□□□□ -1.94
CPSF6-207ENST00000551516 SSTR4P31391 388 aa2.95□□□□□ -1.94
CPSF6-207ENST00000551516 GDNFP39905 211 aa2.95□□□□□ -1.94
CPSF6-207ENST00000551516 EPHB1P54762 984 aa2.95□□□□□ -1.94
CPSF6-207ENST00000551516 JAM2P57087 298 aa2.95□□□□□ -1.94
CPSF6-207ENST00000551516 JAG1P78504 1218 aa2.95□□□□□ -1.94
CPSF6-207ENST00000551516 IRF9Q00978 393 aa2.95□□□□□ -1.94
CPSF6-207ENST00000551516 SP3Q02447 781 aa2.95□□□□□ -1.94
CPSF6-207ENST00000551516 MVKQ03426 396 aa2.95□□□□□ -1.94
CPSF6-207ENST00000551516 SREBF2Q12772 1141 aa2.95□□□□□ -1.94
CPSF6-207ENST00000551516 MTMR1Q13613 665 aa2.95□□□□□ -1.94
CPSF6-207ENST00000551516 SNX17Q15036 470 aa2.95□□□□□ -1.94
CPSF6-207ENST00000551516 PLCL1Q15111 1095 aa2.95□□□□□ -1.94
CPSF6-207ENST00000551516 NR0B2Q15466 257 aa2.95□□□□□ -1.94
CPSF6-207ENST00000551516 CCDC152Q4G0S7 254 aa2.95□□□□□ -1.94
CPSF6-207ENST00000551516 FKBP1CQ5VVH2 108 aa2.95□□□□□ -1.94
CPSF6-207ENST00000551516 STEAP3Q658P3 488 aa2.95□□□□□ -1.94
CPSF6-207ENST00000551516 BICRALQ6AI39 1079 aa2.95□□□□□ -1.94
CPSF6-207ENST00000551516 HHIPL2Q6UWX4 724 aa2.95□□□□□ -1.94
CPSF6-207ENST00000551516 LHFPL2Q6ZUX7 228 aa2.95□□□□□ -1.94
CPSF6-207ENST00000551516 NOL8Q76FK4 1167 aaKnown RBP2.95□□□□□ -1.94
CPSF6-207ENST00000551516 ATG9AQ7Z3C6 839 aa2.95□□□□□ -1.94
CPSF6-207ENST00000551516 DCP2Q8IU60 420 aaKnown RBP2.95□□□□□ -1.94
CPSF6-207ENST00000551516 ANKRD18AQ8IVF6 992 aa2.95□□□□□ -1.94
CPSF6-207ENST00000551516 EFHBQ8N7U6 833 aa2.95□□□□□ -1.94
CPSF6-207ENST00000551516 CNTD1Q8N815 330 aa2.95□□□□□ -1.94
CPSF6-207ENST00000551516 LINS1Q8NG48 757 aa2.95□□□□□ -1.94
CPSF6-207ENST00000551516 PIP4K2CQ8TBX8 421 aa2.95□□□□□ -1.94
CPSF6-207ENST00000551516 PPIL4Q8WUA2 492 aaKnown RBP eCLIP2.95□□□□□ -1.94
CPSF6-207ENST00000551516 USP6NLQ92738 828 aa2.95□□□□□ -1.94
CPSF6-207ENST00000551516 CCDC136Q96JN2 1154 aa2.95□□□□□ -1.94
CPSF6-207ENST00000551516 MTA3Q9BTC8 594 aa2.95□□□□□ -1.94
CPSF6-207ENST00000551516 TMEM39BQ9GZU3 492 aa2.95□□□□□ -1.94
CPSF6-207ENST00000551516 AP5M1Q9H0R1 490 aa2.95□□□□□ -1.94
CPSF6-207ENST00000551516 SMOC1Q9H4F8 434 aa2.95□□□□□ -1.94
CPSF6-207ENST00000551516 PCIF1Q9H4Z3 704 aa2.95□□□□□ -1.94
CPSF6-207ENST00000551516 EMC7Q9NPA0 242 aa2.95□□□□□ -1.94
CPSF6-207ENST00000551516 PRDM7Q9NQW5 492 aa2.95□□□□□ -1.94
CPSF6-207ENST00000551516 SPTLC3Q9NUV7 552 aa2.95□□□□□ -1.94
CPSF6-207ENST00000551516 OXSMQ9NWU1 459 aa2.95□□□□□ -1.94
CPSF6-207ENST00000551516 GPR160Q9UJ42 338 aa2.95□□□□□ -1.94
CPSF6-207ENST00000551516 NUDT5Q9UKK9 219 aa2.95□□□□□ -1.94
CPSF6-207ENST00000551516 DSEQ9UL01 958 aa2.95□□□□□ -1.94
CPSF6-207ENST00000551516 GABRQQ9UN88 632 aa2.95□□□□□ -1.94
CPSF6-207ENST00000551516 TRIM17Q9Y577 477 aa2.95□□□□□ -1.94
CPSF6-207ENST00000551516 MYBBP1AQ9BQG0 1328 aaKnown RBP2.94□□□□□ -1.94
CPSF6-207ENST00000551516 PIEZO1Q92508 2521 aa2.94□□□□□ -1.94
CPSF6-207ENST00000551516 CLRN2A0PK11 232 aa2.94□□□□□ -1.94
CPSF6-207ENST00000551516 ZNF561-AS1K7EIQ3 104 aa2.94□□□□□ -1.94
CPSF6-207ENST00000551516 ELL2O00472 640 aaPredicted RBP2.94□□□□□ -1.94
CPSF6-207ENST00000551516 SLC27A2O14975 620 aa2.94□□□□□ -1.94
CPSF6-207ENST00000551516 NPHP1O15259 732 aa2.94□□□□□ -1.94
CPSF6-207ENST00000551516 PSPNO60542 156 aa2.94□□□□□ -1.94
CPSF6-207ENST00000551516 PRKD3O94806 890 aa2.94□□□□□ -1.94
CPSF6-207ENST00000551516 HPXP02790 462 aa2.94□□□□□ -1.94
CPSF6-207ENST00000551516 AMY2AP04746 511 aa2.94□□□□□ -1.94
CPSF6-207ENST00000551516 CYP17A1P05093 508 aa2.94□□□□□ -1.94
CPSF6-207ENST00000551516 NBPF7P0C2Y1 421 aaPredicted RBP2.94□□□□□ -1.94
CPSF6-207ENST00000551516 MSL3P1P0C860 447 aa2.94□□□□□ -1.94
CPSF6-207ENST00000551516 PNLIPP16233 465 aa2.94□□□□□ -1.94
CPSF6-207ENST00000551516 SLC9A1P19634 815 aa2.94□□□□□ -1.94
CPSF6-207ENST00000551516 AMY2BP19961 511 aa2.94□□□□□ -1.94
CPSF6-207ENST00000551516 SPINK2P20155 84 aa2.94□□□□□ -1.94
CPSF6-207ENST00000551516 CCND1P24385 295 aa2.94□□□□□ -1.94
CPSF6-207ENST00000551516 TACR1P25103 407 aa2.94□□□□□ -1.94
CPSF6-207ENST00000551516 LSP1P33241 339 aa2.94□□□□□ -1.94
CPSF6-207ENST00000551516 CD97P48960 835 aa2.94□□□□□ -1.94
CPSF6-207ENST00000551516 KIF11P52732 1056 aa2.94□□□□□ -1.94
CPSF6-207ENST00000551516 SESN3P58005 492 aa2.94□□□□□ -1.94
CPSF6-207ENST00000551516 RHBDL3P58872 404 aa2.94□□□□□ -1.94
CPSF6-207ENST00000551516 LMOD3Q0VAK6 560 aa2.94□□□□□ -1.94
CPSF6-207ENST00000551516 UBE4AQ14139 1066 aa2.94□□□□□ -1.94
CPSF6-207ENST00000551516 TTF1Q15361 905 aaPredicted RBP2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms