RNA–Protein interactions for RNA: ENST00000550592.1

LIMA1-205, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-205ENST00000550592 RHOT1Q8IXI2 618 aa6.24□□□□□ -1.41
LIMA1-205ENST00000550592 CAMKK1Q8N5S9 505 aa6.24□□□□□ -1.41
LIMA1-205ENST00000550592 LILRA3Q8N6C8 439 aaPredicted RBP6.24□□□□□ -1.41
LIMA1-205ENST00000550592 OR7D4Q8NG98 312 aa6.24□□□□□ -1.41
LIMA1-205ENST00000550592 PPP1R35Q8TAP8 253 aa6.24□□□□□ -1.41
LIMA1-205ENST00000550592 ZNF480Q8WV37 535 aa6.24□□□□□ -1.41
LIMA1-205ENST00000550592 KAT5Q92993 513 aa6.24□□□□□ -1.41
LIMA1-205ENST00000550592 TTC17Q96AE7 1141 aa6.24□□□□□ -1.41
LIMA1-205ENST00000550592 CYFIP2Q96F07 1278 aa6.24□□□□□ -1.41
LIMA1-205ENST00000550592 TMEM60Q9H2L4 133 aa6.24□□□□□ -1.41
LIMA1-205ENST00000550592 MANSC1Q9H8J5 431 aa6.24□□□□□ -1.41
LIMA1-205ENST00000550592 TLR9Q9NR96 1032 aa6.24□□□□□ -1.41
LIMA1-205ENST00000550592 TRPS1Q9UHF7 1281 aa6.24□□□□□ -1.41
LIMA1-205ENST00000550592 MROH6A6NGR9 719 aa6.23□□□□□ -1.41
LIMA1-205ENST00000550592 A6NNZ2 444 aa6.23□□□□□ -1.41
LIMA1-205ENST00000550592 PAX4O43316 350 aa6.23□□□□□ -1.41
LIMA1-205ENST00000550592 B3GALT2O43825 422 aa6.23□□□□□ -1.41
LIMA1-205ENST00000550592 PLIN1O60240 522 aa6.23□□□□□ -1.41
LIMA1-205ENST00000550592 TOX4O94842 621 aa6.23□□□□□ -1.41
LIMA1-205ENST00000550592 JUNP05412 331 aaKnown RBP6.23□□□□□ -1.41
LIMA1-205ENST00000550592 VSIG10L2P0DP72 767 aa6.23□□□□□ -1.41
LIMA1-205ENST00000550592 CRHR1P34998 444 aa6.23□□□□□ -1.41
LIMA1-205ENST00000550592 SREBF1P36956 1147 aa6.23□□□□□ -1.41
LIMA1-205ENST00000550592 IL12RB1P42701 662 aa6.23□□□□□ -1.41
LIMA1-205ENST00000550592 ATP2C1P98194 919 aaPredicted RBP6.23□□□□□ -1.41
LIMA1-205ENST00000550592 CDC42EP1Q00587 391 aa6.23□□□□□ -1.41
LIMA1-205ENST00000550592 UBE4AQ14139 1066 aa6.23□□□□□ -1.41
LIMA1-205ENST00000550592 GAGE13Q4V321 117 aa6.23□□□□□ -1.41
LIMA1-205ENST00000550592 RALYLQ86SE5 291 aaKnown RBP6.23□□□□□ -1.41
LIMA1-205ENST00000550592 DRC7Q8IY82 874 aa6.23□□□□□ -1.41
LIMA1-205ENST00000550592 PJA1Q8NG27 643 aa6.23□□□□□ -1.41
LIMA1-205ENST00000550592 FMNL2Q96PY5 1086 aa6.23□□□□□ -1.41
LIMA1-205ENST00000550592 DMRTA2Q96SC8 542 aa6.23□□□□□ -1.41
LIMA1-205ENST00000550592 CGRRF1Q99675 332 aa6.23□□□□□ -1.41
LIMA1-205ENST00000550592 LRFN3Q9BTN0 628 aa6.23□□□□□ -1.41
LIMA1-205ENST00000550592 FAM204AQ9H8W3 233 aa6.23□□□□□ -1.41
LIMA1-205ENST00000550592 KMT5AQ9NQR1 393 aa6.23□□□□□ -1.41
LIMA1-205ENST00000550592 TDP1Q9NUW8 608 aa6.23□□□□□ -1.41
LIMA1-205ENST00000550592 GPRC5DQ9NZD1 345 aa6.23□□□□□ -1.41
LIMA1-205ENST00000550592 PMS2P1A4D2B8 440 aa6.22□□□□□ -1.41
LIMA1-205ENST00000550592 ARHGAP6O43182 974 aa6.22□□□□□ -1.41
LIMA1-205ENST00000550592 ZBED1O96006 694 aa6.22□□□□□ -1.41
LIMA1-205ENST00000550592 MYBP10242 640 aa6.22□□□□□ -1.41
LIMA1-205ENST00000550592 GYPEP15421 78 aa6.22□□□□□ -1.41
LIMA1-205ENST00000550592 PHKG2P15735 406 aa6.22□□□□□ -1.41
LIMA1-205ENST00000550592 AGFG1P52594 562 aaKnown RBP6.22□□□□□ -1.41
LIMA1-205ENST00000550592 SLURP1P55000 103 aa6.22□□□□□ -1.41
LIMA1-205ENST00000550592 BPIFB4P59827 614 aa6.22□□□□□ -1.41
LIMA1-205ENST00000550592 ADAM8P78325 824 aa6.22□□□□□ -1.41
LIMA1-205ENST00000550592 KIAA2012Q0VF49 1180 aa6.22□□□□□ -1.41
LIMA1-205ENST00000550592 VMACQ2NL98 169 aa6.22□□□□□ -1.41
LIMA1-205ENST00000550592 TCERG1LQ5VWI1 586 aa6.22□□□□□ -1.41
LIMA1-205ENST00000550592 KBTBD2Q8IY47 623 aa6.22□□□□□ -1.41
LIMA1-205ENST00000550592 KIAA0319LQ8IZA0 1049 aa6.22□□□□□ -1.41
LIMA1-205ENST00000550592 PQLC1Q8N2U9 271 aa6.22□□□□□ -1.41
LIMA1-205ENST00000550592 MRGPRX4Q96LA9 322 aa6.22□□□□□ -1.41
LIMA1-205ENST00000550592 ZNF700Q9H0M5 742 aa6.22□□□□□ -1.41
LIMA1-205ENST00000550592 SLC4A7Q9Y6M7 1214 aa6.22□□□□□ -1.41
LIMA1-205ENST00000550592 TPP1O14773 563 aa6.21□□□□□ -1.42
LIMA1-205ENST00000550592 ITGA10O75578 1167 aa6.21□□□□□ -1.42
LIMA1-205ENST00000550592 RHCEP18577 417 aa6.21□□□□□ -1.42
LIMA1-205ENST00000550592 HTR1BP28222 390 aa6.21□□□□□ -1.42
LIMA1-205ENST00000550592 MAP2K6P52564 334 aa6.21□□□□□ -1.42
LIMA1-205ENST00000550592 HK3P52790 923 aa6.21□□□□□ -1.42
LIMA1-205ENST00000550592 PER3P56645 1201 aa6.21□□□□□ -1.42
LIMA1-205ENST00000550592 RHDQ02161 417 aa6.21□□□□□ -1.42
LIMA1-205ENST00000550592 ANKRD53Q8N9V6 530 aa6.21□□□□□ -1.42
LIMA1-205ENST00000550592 C3orf20Q8ND61 904 aa6.21□□□□□ -1.42
LIMA1-205ENST00000550592 RGMAQ96B86 450 aa6.21□□□□□ -1.42
LIMA1-205ENST00000550592 CLPTM1LQ96KA5 538 aa6.21□□□□□ -1.42
LIMA1-205ENST00000550592 PDCD2LQ9BRP1 358 aa6.21□□□□□ -1.42
LIMA1-205ENST00000550592 CALCOCO1Q9P1Z2 691 aa6.21□□□□□ -1.42
LIMA1-205ENST00000550592 L1RE1Q9UN81 338 aa6.21□□□□□ -1.42
LIMA1-205ENST00000550592 POLHQ9Y253 713 aa6.21□□□□□ -1.42
LIMA1-205ENST00000550592 HECW2Q9P2P5 1572 aa6.2□□□□□ -1.42
LIMA1-205ENST00000550592 ANO9A1A5B4 782 aa6.2□□□□□ -1.42
LIMA1-205ENST00000550592 FAM227AF5H4B4 570 aa6.2□□□□□ -1.42
LIMA1-205ENST00000550592 NUAK1O60285 661 aa6.2□□□□□ -1.42
LIMA1-205ENST00000550592 NOBOXO60393 691 aa6.2□□□□□ -1.42
LIMA1-205ENST00000550592 FTLP02792 175 aaPredicted RBP6.2□□□□□ -1.42
LIMA1-205ENST00000550592 AMY1AP04745 511 aa6.2□□□□□ -1.42
LIMA1-205ENST00000550592 GUCY1A2P33402 732 aa6.2□□□□□ -1.42
LIMA1-205ENST00000550592 ATP8B2P98198 1209 aa6.2□□□□□ -1.42
LIMA1-205ENST00000550592 DUSP2Q05923 314 aa6.2□□□□□ -1.42
LIMA1-205ENST00000550592 TARDBPQ13148 414 aaKnown RBP eCLIP6.2□□□□□ -1.42
LIMA1-205ENST00000550592 HDAC1Q13547 482 aaPredicted RBP6.2□□□□□ -1.42
LIMA1-205ENST00000550592 RAB39AQ14964 217 aa6.2□□□□□ -1.42
LIMA1-205ENST00000550592 ACAP1Q15027 740 aa6.2□□□□□ -1.42
LIMA1-205ENST00000550592 LLGL1Q15334 1064 aa6.2□□□□□ -1.42
LIMA1-205ENST00000550592 SAFBQ15424 915 aaKnown RBP eCLIP6.2□□□□□ -1.42
LIMA1-205ENST00000550592 PKN1Q16512 942 aa6.2□□□□□ -1.42
LIMA1-205ENST00000550592 RNF151Q2KHN1 245 aa6.2□□□□□ -1.42
LIMA1-205ENST00000550592 ANO6Q4KMQ2 910 aa6.2□□□□□ -1.42
LIMA1-205ENST00000550592 COBLL1Q53SF7 1204 aa6.2□□□□□ -1.42
LIMA1-205ENST00000550592 FAM124AQ86V42 546 aa6.2□□□□□ -1.42
LIMA1-205ENST00000550592 TRMT2AQ8IZ69 625 aaKnown RBP6.2□□□□□ -1.42
LIMA1-205ENST00000550592 ZDHHC14Q8IZN3 488 aa6.2□□□□□ -1.42
LIMA1-205ENST00000550592 CMTM4Q8IZR5 234 aa6.2□□□□□ -1.42
LIMA1-205ENST00000550592 OR14K1Q8NGZ2 314 aa6.2□□□□□ -1.42
LIMA1-205ENST00000550592 KLHDC4Q8TBB5 520 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms