RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 RNF168Q8IYW5 571 aaPredicted RBP13.65□□□□□ -0.22
DDX54-206ENST00000549271 MBOAT7Q96N66 472 aa13.65□□□□□ -0.22
DDX54-206ENST00000549271 AIFM3Q96NN9 605 aa13.65□□□□□ -0.22
DDX54-206ENST00000549271 CEP89Q96ST8 783 aa13.65□□□□□ -0.22
DDX54-206ENST00000549271 TMEM175Q9BSA9 504 aa13.65□□□□□ -0.22
DDX54-206ENST00000549271 HERC2P3Q9BVR0 1158 aa13.65□□□□□ -0.22
DDX54-206ENST00000549271 FAM126AQ9BYI3 521 aaPredicted RBP13.65□□□□□ -0.22
DDX54-206ENST00000549271 UNC45AQ9H3U1 944 aa13.65□□□□□ -0.22
DDX54-206ENST00000549271 PLEKHA4Q9H4M7 779 aa13.65□□□□□ -0.22
DDX54-206ENST00000549271 LTB4R2Q9NPC1 389 aa13.65□□□□□ -0.22
DDX54-206ENST00000549271 ZDHHC7Q9NXF8 308 aa13.65□□□□□ -0.22
DDX54-206ENST00000549271 ANGPTL2Q9UKU9 493 aa13.65□□□□□ -0.22
DDX54-206ENST00000549271 SSX2IPQ9Y2D8 614 aa13.65□□□□□ -0.22
DDX54-206ENST00000549271 IGKV6-21A0A0C4DH24 114 aa13.64□□□□□ -0.23
DDX54-206ENST00000549271 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.64□□□□□ -0.23
DDX54-206ENST00000549271 M0R2N6 131 aa13.64□□□□□ -0.23
DDX54-206ENST00000549271 NRP1O14786 923 aa13.64□□□□□ -0.23
DDX54-206ENST00000549271 DTNBO60941 627 aa13.64□□□□□ -0.23
DDX54-206ENST00000549271 LRP3O75074 770 aa13.64□□□□□ -0.23
DDX54-206ENST00000549271 STBD1O95210 358 aa13.64□□□□□ -0.23
DDX54-206ENST00000549271 DEXIO95424 95 aa13.64□□□□□ -0.23
DDX54-206ENST00000549271 ALDH2P05091 517 aa13.64□□□□□ -0.23
DDX54-206ENST00000549271 MYBP10242 640 aa13.64□□□□□ -0.23
DDX54-206ENST00000549271 PMLP29590 882 aa13.64□□□□□ -0.23
DDX54-206ENST00000549271 RPS9P46781 194 aaKnown RBP13.64□□□□□ -0.23
DDX54-206ENST00000549271 NLRP5P59047 1200 aa13.64□□□□□ -0.23
DDX54-206ENST00000549271 SHC2P98077 582 aa13.64□□□□□ -0.23
DDX54-206ENST00000549271 DMWDQ09019 674 aa13.64□□□□□ -0.23
DDX54-206ENST00000549271 XKR3Q5GH77 459 aa13.64□□□□□ -0.23
DDX54-206ENST00000549271 LRCH2Q5VUJ6 765 aa13.64□□□□□ -0.23
DDX54-206ENST00000549271 LAIR1Q6GTX8 287 aa13.64□□□□□ -0.23
DDX54-206ENST00000549271 TWF2Q6IBS0 349 aaKnown RBP13.64□□□□□ -0.23
DDX54-206ENST00000549271 TAS1R1Q7RTX1 841 aa13.64□□□□□ -0.23
DDX54-206ENST00000549271 TBCKQ8TEA7 893 aa13.64□□□□□ -0.23
DDX54-206ENST00000549271 NLRP7Q8WX94 980 aa13.64□□□□□ -0.23
DDX54-206ENST00000549271 PRKD2Q9BZL6 878 aa13.64□□□□□ -0.23
DDX54-206ENST00000549271 SLKQ9H2G2 1235 aaPredicted RBP13.64□□□□□ -0.23
DDX54-206ENST00000549271 PIDD1Q9HB75 910 aa13.64□□□□□ -0.23
DDX54-206ENST00000549271 SH2B1Q9NRF2 756 aaPredicted RBP13.64□□□□□ -0.23
DDX54-206ENST00000549271 FAM105AQ9NUU6 356 aa13.64□□□□□ -0.23
DDX54-206ENST00000549271 PCDHA4Q9UN74 947 aa13.64□□□□□ -0.23
DDX54-206ENST00000549271 FAN1Q9Y2M0 1017 aa13.64□□□□□ -0.23
DDX54-206ENST00000549271 CTDNEP1O95476 244 aa13.63□□□□□ -0.23
DDX54-206ENST00000549271 SPATA31D3P0C874 917 aa13.63□□□□□ -0.23
DDX54-206ENST00000549271 TDGF1P13385 188 aa13.63□□□□□ -0.23
DDX54-206ENST00000549271 CD72P21854 359 aa13.63□□□□□ -0.23
DDX54-206ENST00000549271 RAB27AP51159 221 aa13.63□□□□□ -0.23
DDX54-206ENST00000549271 AFF1P51825 1210 aaKnown RBP13.63□□□□□ -0.23
DDX54-206ENST00000549271 FZD5Q13467 585 aa13.63□□□□□ -0.23
DDX54-206ENST00000549271 C8orf34Q49A92 452 aa13.63□□□□□ -0.23
DDX54-206ENST00000549271 ZBTB41Q5SVQ8 909 aa13.63□□□□□ -0.23
DDX54-206ENST00000549271 GALNT17Q6IS24 598 aa13.63□□□□□ -0.23
DDX54-206ENST00000549271 AGMOQ6ZNB7 445 aa13.63□□□□□ -0.23
DDX54-206ENST00000549271 SPATA31D4Q6ZUB0 917 aa13.63□□□□□ -0.23
DDX54-206ENST00000549271 DAGLBQ8NCG7 672 aa13.63□□□□□ -0.23
DDX54-206ENST00000549271 SCLT1Q96NL6 688 aa13.63□□□□□ -0.23
DDX54-206ENST00000549271 MARCH5Q9NX47 278 aa13.63□□□□□ -0.23
DDX54-206ENST00000549271 TGM5O43548 720 aa13.62□□□□□ -0.23
DDX54-206ENST00000549271 CHMP2AO43633 222 aa13.62□□□□□ -0.23
DDX54-206ENST00000549271 EIF5BO60841 1220 aaKnown RBP13.62□□□□□ -0.23
DDX54-206ENST00000549271 LARGE1O95461 756 aa13.62□□□□□ -0.23
DDX54-206ENST00000549271 TARSP26639 723 aaKnown RBP13.62□□□□□ -0.23
DDX54-206ENST00000549271 GLUD2P49448 558 aa13.62□□□□□ -0.23
DDX54-206ENST00000549271 DRP2Q13474 957 aa13.62□□□□□ -0.23
DDX54-206ENST00000549271 ANKRD1Q15327 319 aa13.62□□□□□ -0.23
DDX54-206ENST00000549271 ME3Q16798 604 aa13.62□□□□□ -0.23
DDX54-206ENST00000549271 LILRA6Q6PI73 481 aa13.62□□□□□ -0.23
DDX54-206ENST00000549271 CPLX2Q6PUV4 134 aaKnown RBP13.62□□□□□ -0.23
DDX54-206ENST00000549271 MIER3Q7Z3K6 550 aa13.62□□□□□ -0.23
DDX54-206ENST00000549271 ZNF410Q86VK4 478 aa13.62□□□□□ -0.23
DDX54-206ENST00000549271 BLIDQ8IZY5 108 aa13.62□□□□□ -0.23
DDX54-206ENST00000549271 ETNPPLQ8TBG4 499 aa13.62□□□□□ -0.23
DDX54-206ENST00000549271 URGCPQ8TCY9 931 aa13.62□□□□□ -0.23
DDX54-206ENST00000549271 NELL2Q99435 816 aa13.62□□□□□ -0.23
DDX54-206ENST00000549271 GCOM2Q9BZD3 368 aaPredicted RBP13.62□□□□□ -0.23
DDX54-206ENST00000549271 INO80BQ9C086 356 aaPredicted RBP13.62□□□□□ -0.23
DDX54-206ENST00000549271 CDH7Q9ULB5 785 aa13.62□□□□□ -0.23
DDX54-206ENST00000549271 PIN4Q9Y237 131 aaKnown RBP13.62□□□□□ -0.23
DDX54-206ENST00000549271 NOTCH4Q99466 2003 aa13.62□□□□□ -0.23
DDX54-206ENST00000549271 TDRD15B5MCY1 1934 aaKnown RBP13.61□□□□□ -0.23
DDX54-206ENST00000549271 GAS2O43903 313 aaKnown RBP13.61□□□□□ -0.23
DDX54-206ENST00000549271 MAFO75444 373 aaPredicted RBP13.61□□□□□ -0.23
DDX54-206ENST00000549271 TDP2O95551 362 aa13.61□□□□□ -0.23
DDX54-206ENST00000549271 RETP07949 1114 aa13.61□□□□□ -0.23
DDX54-206ENST00000549271 SFPQP23246 707 aaKnown RBP eCLIP13.61□□□□□ -0.23
DDX54-206ENST00000549271 FSHRP23945 695 aa13.61□□□□□ -0.23
DDX54-206ENST00000549271 DNM2P50570 870 aa13.61□□□□□ -0.23
DDX54-206ENST00000549271 NEK4P51957 841 aa13.61□□□□□ -0.23
DDX54-206ENST00000549271 PFKPQ01813 784 aa13.61□□□□□ -0.23
DDX54-206ENST00000549271 DSG1Q02413 1049 aa13.61□□□□□ -0.23
DDX54-206ENST00000549271 PRR23CQ6ZRP0 262 aa13.61□□□□□ -0.23
DDX54-206ENST00000549271 MTSS1LQ765P7 747 aa13.61□□□□□ -0.23
DDX54-206ENST00000549271 MRPL10Q7Z7H8 261 aaKnown RBP13.61□□□□□ -0.23
DDX54-206ENST00000549271 CELF5Q8N6W0 485 aaKnown RBP13.61□□□□□ -0.23
DDX54-206ENST00000549271 NECAB1Q8N987 351 aa13.61□□□□□ -0.23
DDX54-206ENST00000549271 DDX1Q92499 740 aaKnown RBP13.61□□□□□ -0.23
DDX54-206ENST00000549271 GJA10Q969M2 543 aa13.61□□□□□ -0.23
DDX54-206ENST00000549271 PGBD4Q96DM1 585 aa13.61□□□□□ -0.23
DDX54-206ENST00000549271 JPH2Q9BR39 696 aaPredicted RBP13.61□□□□□ -0.23
DDX54-206ENST00000549271 SEMA4GQ9NTN9 838 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms