RNA–Protein interactions for RNA: ENST00000548092.5

TRAFD1-204, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-204ENST00000548092 HSP90AA2PQ14568 343 aaPredicted RBP5.19□□□□□ -1.58
TRAFD1-204ENST00000548092 KIF22Q14807 665 aa5.19□□□□□ -1.58
TRAFD1-204ENST00000548092 PLEKHO1Q53GL0 409 aaPredicted RBP5.19□□□□□ -1.58
TRAFD1-204ENST00000548092 PHF19Q5T6S3 580 aa5.19□□□□□ -1.58
TRAFD1-204ENST00000548092 L1TD1Q5T7N2 865 aaKnown RBP5.19□□□□□ -1.58
TRAFD1-204ENST00000548092 YOD1Q5VVQ6 348 aaPredicted RBP5.19□□□□□ -1.58
TRAFD1-204ENST00000548092 DPP8Q6V1X1 898 aaPredicted RBP5.19□□□□□ -1.58
TRAFD1-204ENST00000548092 PROSER1Q86XN7 944 aa5.19□□□□□ -1.58
TRAFD1-204ENST00000548092 EXOC6Q8TAG9 804 aa5.19□□□□□ -1.58
TRAFD1-204ENST00000548092 PIP4K2CQ8TBX8 421 aa5.19□□□□□ -1.58
TRAFD1-204ENST00000548092 RAET1EQ8TD07 263 aa5.19□□□□□ -1.58
TRAFD1-204ENST00000548092 ZNF496Q96IT1 587 aaPredicted RBP5.19□□□□□ -1.58
TRAFD1-204ENST00000548092 CLMNQ96JQ2 1002 aa5.19□□□□□ -1.58
TRAFD1-204ENST00000548092 DEFB118Q96PH6 123 aa5.19□□□□□ -1.58
TRAFD1-204ENST00000548092 YIPF4Q9BSR8 244 aa5.19□□□□□ -1.58
TRAFD1-204ENST00000548092 SMOC1Q9H4F8 434 aa5.19□□□□□ -1.58
TRAFD1-204ENST00000548092 SLC52A2Q9HAB3 445 aa5.19□□□□□ -1.58
TRAFD1-204ENST00000548092 SLC6A20Q9NP91 592 aa5.19□□□□□ -1.58
TRAFD1-204ENST00000548092 NGRNQ9NPE2 291 aaKnown RBP5.19□□□□□ -1.58
TRAFD1-204ENST00000548092 MYOTQ9UBF9 498 aa5.19□□□□□ -1.58
TRAFD1-204ENST00000548092 ASH2LQ9UBL3 628 aa5.19□□□□□ -1.58
TRAFD1-204ENST00000548092 R3HCC1Q9Y3T6 440 aaKnown RBP5.19□□□□□ -1.58
TRAFD1-204ENST00000548092 CEP250Q9BV73 2442 aa5.19□□□□□ -1.58
TRAFD1-204ENST00000548092 DDX60Q8IY21 1712 aaKnown RBP5.19□□□□□ -1.58
TRAFD1-204ENST00000548092 BRWD1Q9NSI6 2320 aa5.19□□□□□ -1.58
TRAFD1-204ENST00000548092 SCN9AQ15858 1988 aa5.18□□□□□ -1.58
TRAFD1-204ENST00000548092 FSD2A1L4K1 749 aa5.18□□□□□ -1.58
TRAFD1-204ENST00000548092 FYB1O15117 783 aa5.18□□□□□ -1.58
TRAFD1-204ENST00000548092 B4GALT3O60512 393 aa5.18□□□□□ -1.58
TRAFD1-204ENST00000548092 PLATP00750 562 aa5.18□□□□□ -1.58
TRAFD1-204ENST00000548092 LTFP02788 710 aa5.18□□□□□ -1.58
TRAFD1-204ENST00000548092 RBM25P49756 843 aaKnown RBP5.18□□□□□ -1.58
TRAFD1-204ENST00000548092 ZXDCQ2QGD7 858 aaPredicted RBP5.18□□□□□ -1.58
TRAFD1-204ENST00000548092 AMOTQ4VCS5 1084 aa5.18□□□□□ -1.58
TRAFD1-204ENST00000548092 AKNAD1Q5T1N1 836 aa5.18□□□□□ -1.58
TRAFD1-204ENST00000548092 KRTAP5-3Q6L8H2 238 aa5.18□□□□□ -1.58
TRAFD1-204ENST00000548092 TMC5Q6UXY8 1006 aa5.18□□□□□ -1.58
TRAFD1-204ENST00000548092 NPM2Q86SE8 214 aaKnown RBP5.18□□□□□ -1.58
TRAFD1-204ENST00000548092 PPM1EQ8WY54 764 aa5.18□□□□□ -1.58
TRAFD1-204ENST00000548092 ZCCHC14Q8WYQ9 949 aaKnown RBP5.18□□□□□ -1.58
TRAFD1-204ENST00000548092 MBD6Q96DN6 1003 aa5.18□□□□□ -1.58
TRAFD1-204ENST00000548092 SGSM3Q96HU1 749 aa5.18□□□□□ -1.58
TRAFD1-204ENST00000548092 RBM17Q96I25 401 aaKnown RBP5.18□□□□□ -1.58
TRAFD1-204ENST00000548092 DBNDD1Q9H9R9 158 aa5.18□□□□□ -1.58
TRAFD1-204ENST00000548092 RCAN3Q9UKA8 241 aa5.18□□□□□ -1.58
TRAFD1-204ENST00000548092 CROTQ9UKG9 612 aa5.18□□□□□ -1.58
TRAFD1-204ENST00000548092 CNOT11Q9UKZ1 510 aaKnown RBP5.18□□□□□ -1.58
TRAFD1-204ENST00000548092 NIP7Q9Y221 180 aaKnown RBP eCLIP5.18□□□□□ -1.58
TRAFD1-204ENST00000548092 MYPNQ86TC9 1320 aa5.18□□□□□ -1.58
TRAFD1-204ENST00000548092 DDX60LQ5H9U9 1706 aaKnown RBP5.17□□□□□ -1.58
TRAFD1-204ENST00000548092 NKRFO15226 690 aaKnown RBP eCLIP5.17□□□□□ -1.58
TRAFD1-204ENST00000548092 FRAT2O75474 233 aaPredicted RBP5.17□□□□□ -1.58
TRAFD1-204ENST00000548092 PABPC1P11940 636 aaKnown RBP5.17□□□□□ -1.58
TRAFD1-204ENST00000548092 RAB33AQ14088 237 aa5.17□□□□□ -1.58
TRAFD1-204ENST00000548092 C1orf141Q5JVX7 400 aa5.17□□□□□ -1.58
TRAFD1-204ENST00000548092 OTOP3Q7RTS5 596 aa5.17□□□□□ -1.58
TRAFD1-204ENST00000548092 LIMS2Q7Z4I7 341 aa5.17□□□□□ -1.58
TRAFD1-204ENST00000548092 LGI4Q8N135 537 aa5.17□□□□□ -1.58
TRAFD1-204ENST00000548092 BRI3BPQ8WY22 251 aa5.17□□□□□ -1.58
TRAFD1-204ENST00000548092 LCORQ96JN0 433 aaPredicted RBP5.17□□□□□ -1.58
TRAFD1-204ENST00000548092 KCNJ15Q99712 375 aa5.17□□□□□ -1.58
TRAFD1-204ENST00000548092 AARSD1Q9BTE6 412 aaKnown RBP5.17□□□□□ -1.58
TRAFD1-204ENST00000548092 KRTAP3-1Q9BYR8 98 aa5.17□□□□□ -1.58
TRAFD1-204ENST00000548092 TMX4Q9H1E5 349 aaPredicted RBP5.17□□□□□ -1.58
TRAFD1-204ENST00000548092 FZD1Q9UP38 647 aa5.17□□□□□ -1.58
TRAFD1-204ENST00000548092 TELO2Q9Y4R8 837 aa5.17□□□□□ -1.58
TRAFD1-204ENST00000548092 USP9XQ93008 2570 aaPredicted RBP5.17□□□□□ -1.58
TRAFD1-204ENST00000548092 ZZEF1O43149 2961 aa5.17□□□□□ -1.58
TRAFD1-204ENST00000548092 FRYLO94915 3013 aa5.17□□□□□ -1.58
TRAFD1-204ENST00000548092 PFASO15067 1338 aa5.17□□□□□ -1.58
TRAFD1-204ENST00000548092 MYBBP1AQ9BQG0 1328 aaKnown RBP5.17□□□□□ -1.58
TRAFD1-204ENST00000548092 EP300Q09472 2414 aaPredicted RBP5.16□□□□□ -1.58
TRAFD1-204ENST00000548092 PI4K2BG5E9Z4 385 aa5.16□□□□□ -1.58
TRAFD1-204ENST00000548092 ECE2O60344 883 aa5.16□□□□□ -1.58
TRAFD1-204ENST00000548092 TLR2O60603 784 aa5.16□□□□□ -1.58
TRAFD1-204ENST00000548092 A1BGP04217 495 aa5.16□□□□□ -1.58
TRAFD1-204ENST00000548092 CYP1A1P04798 512 aaPredicted RBP5.16□□□□□ -1.58
TRAFD1-204ENST00000548092 VIL1P09327 827 aaKnown RBP5.16□□□□□ -1.58
TRAFD1-204ENST00000548092 FGFR1P11362 822 aa5.16□□□□□ -1.58
TRAFD1-204ENST00000548092 COL6A1P12109 1028 aa5.16□□□□□ -1.58
TRAFD1-204ENST00000548092 PSMC4P43686 418 aa5.16□□□□□ -1.58
TRAFD1-204ENST00000548092 ADAM17P78536 824 aa5.16□□□□□ -1.58
TRAFD1-204ENST00000548092 CALD1Q05682 793 aaKnown RBP5.16□□□□□ -1.58
TRAFD1-204ENST00000548092 ACAP1Q15027 740 aa5.16□□□□□ -1.58
TRAFD1-204ENST00000548092 RALBP1Q15311 655 aa5.16□□□□□ -1.58
TRAFD1-204ENST00000548092 C9orf50Q5SZB4 431 aa5.16□□□□□ -1.58
TRAFD1-204ENST00000548092 RSPO2Q6UXX9 243 aaPredicted RBP5.16□□□□□ -1.58
TRAFD1-204ENST00000548092 NSMFQ6X4W1 530 aa5.16□□□□□ -1.58
TRAFD1-204ENST00000548092 LBX2Q6XYB7 198 aa5.16□□□□□ -1.58
TRAFD1-204ENST00000548092 CENPQQ7L2Z9 268 aaPredicted RBP5.16□□□□□ -1.58
TRAFD1-204ENST00000548092 PHOSPHO1Q8TCT1 267 aa5.16□□□□□ -1.58
TRAFD1-204ENST00000548092 DCAF4Q8WV16 495 aa5.16□□□□□ -1.58
TRAFD1-204ENST00000548092 C11orf49Q9H6J7 331 aa5.16□□□□□ -1.58
TRAFD1-204ENST00000548092 MYOZ2Q9NPC6 264 aa5.16□□□□□ -1.58
TRAFD1-204ENST00000548092 SMPD4Q9NXE4 827 aa5.16□□□□□ -1.58
TRAFD1-204ENST00000548092 HSPBP1Q9NZL4 362 aa5.16□□□□□ -1.58
TRAFD1-204ENST00000548092 LRRC37AA6NMS7 1700 aa5.16□□□□□ -1.58
TRAFD1-204ENST00000548092 HELZ2Q9BYK8 2649 aaKnown RBP5.16□□□□□ -1.58
TRAFD1-204ENST00000548092 ABCC4O15439 1325 aa5.16□□□□□ -1.58
TRAFD1-204ENST00000548092 LTBP2Q14767 1821 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms