RNA–Protein interactions for RNA: ENST00000547758.1

CCDC59-202, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 553 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-202ENST00000547758 NCLP19338 710 aaKnown RBP15.08■□□□□ 0
CCDC59-202ENST00000547758 ADD1P35611 737 aaKnown RBP15.08■□□□□ 0
CCDC59-202ENST00000547758 ATXN1P54253 815 aaKnown RBP15.08■□□□□ 0
CCDC59-202ENST00000547758 GPC5P78333 572 aa15.08■□□□□ 0
CCDC59-202ENST00000547758 RNF20Q5VTR2 975 aa15.08■□□□□ 0
CCDC59-202ENST00000547758 DHX32Q7L7V1 743 aaKnown RBP15.08■□□□□ 0
CCDC59-202ENST00000547758 KRTAP3-3Q9BYR6 98 aa15.08■□□□□ 0
CCDC59-202ENST00000547758 KRTAP3-2Q9BYR7 98 aa15.08■□□□□ 0
CCDC59-202ENST00000547758 UBN1Q9NPG3 1134 aa15.08■□□□□ 0
CCDC59-202ENST00000547758 NAP1L2Q9ULW6 460 aaPredicted RBP15.08■□□□□ 0
CCDC59-202ENST00000547758 PCDHGA2Q9Y5H1 932 aa15.08■□□□□ 0
CCDC59-202ENST00000547758 COL4A3BPQ9Y5P4 624 aa15.08■□□□□ 0
CCDC59-202ENST00000547758 ZFP37Q9Y6Q3 630 aaPredicted RBP15.08■□□□□ 0
CCDC59-202ENST00000547758 CFAP47Q6ZTR5 3102 aa15.08■□□□□ 0
CCDC59-202ENST00000547758 NOTCH4Q99466 2003 aa15.08■□□□□ 0
CCDC59-202ENST00000547758 CCDC196A0A1B0GTZ2 297 aa15.07■□□□□ 0
CCDC59-202ENST00000547758 DDX11L8A8MPP1 907 aa15.07■□□□□ 0
CCDC59-202ENST00000547758 F8W810 466 aa15.07■□□□□ 0
CCDC59-202ENST00000547758 FSHRP23945 695 aa15.07■□□□□ 0
CCDC59-202ENST00000547758 HOXA11P31270 313 aaPredicted RBP15.07■□□□□ 0
CCDC59-202ENST00000547758 USP11P51784 963 aa15.07■□□□□ 0
CCDC59-202ENST00000547758 DSC1Q08554 894 aa15.07■□□□□ 0
CCDC59-202ENST00000547758 SNW1Q13573 536 aaKnown RBP15.07■□□□□ 0
CCDC59-202ENST00000547758 MLF2Q15773 248 aaPredicted RBP15.07■□□□□ 0
CCDC59-202ENST00000547758 PLA2G4FQ68DD2 849 aa15.07■□□□□ 0
CCDC59-202ENST00000547758 ANO5Q75V66 913 aa15.07■□□□□ 0
CCDC59-202ENST00000547758 SRGAP1Q7Z6B7 1085 aa15.07■□□□□ 0
CCDC59-202ENST00000547758 CNNM3Q8NE01 707 aa15.07■□□□□ 0
CCDC59-202ENST00000547758 ATRIPQ8WXE1 791 aa15.07■□□□□ 0
CCDC59-202ENST00000547758 FGF14Q92915 247 aa15.07■□□□□ 0
CCDC59-202ENST00000547758 SECISBP2LQ93073 1101 aaKnown RBP15.07■□□□□ 0
CCDC59-202ENST00000547758 RPP25Q9BUL9 199 aaKnown RBP15.07■□□□□ 0
CCDC59-202ENST00000547758 DDX23Q9BUQ8 820 aaKnown RBP15.07■□□□□ 0
CCDC59-202ENST00000547758 MINDY3Q9H8M7 445 aa15.07■□□□□ 0
CCDC59-202ENST00000547758 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.07■□□□□ 0
CCDC59-202ENST00000547758 CHST7Q9NS84 486 aa15.07■□□□□ 0
CCDC59-202ENST00000547758 CDV3Q9UKY7 258 aaKnown RBP15.07■□□□□ 0
CCDC59-202ENST00000547758 USP24Q9UPU5 2620 aa15.07■□□□□ 0
CCDC59-202ENST00000547758 PRR5-ARHGAP8B1AHC4 643 aa15.06■□□□□ 0
CCDC59-202ENST00000547758 ITGA4P13612 1032 aa15.06■□□□□ 0
CCDC59-202ENST00000547758 MLH1P40692 756 aa15.06■□□□□ 0
CCDC59-202ENST00000547758 ARHGAP8P85298 464 aa15.06■□□□□ 0
CCDC59-202ENST00000547758 LMNB2Q03252 620 aa15.06■□□□□ 0
CCDC59-202ENST00000547758 PRKCQQ04759 706 aa15.06■□□□□ 0
CCDC59-202ENST00000547758 CSTF1Q05048 431 aaKnown RBP15.06■□□□□ 0
CCDC59-202ENST00000547758 UBXN2BQ14CS0 331 aa15.06■□□□□ 0
CCDC59-202ENST00000547758 LILRA6Q6PI73 481 aa15.06■□□□□ 0
CCDC59-202ENST00000547758 PARM1Q6UWI2 310 aa15.06■□□□□ 0
CCDC59-202ENST00000547758 B3GNT9Q6UX72 402 aa15.06■□□□□ 0
CCDC59-202ENST00000547758 GLYCTKQ8IVS8 523 aa15.06■□□□□ 0
CCDC59-202ENST00000547758 SMG8Q8ND04 991 aaKnown RBP15.06■□□□□ 0
CCDC59-202ENST00000547758 CCDC148Q8NFR7 591 aa15.06■□□□□ 0
CCDC59-202ENST00000547758 B3GALT6Q96L58 329 aa15.06■□□□□ 0
CCDC59-202ENST00000547758 GAD1Q99259 594 aa15.06■□□□□ 0
CCDC59-202ENST00000547758 OSBPL6Q9BZF3 934 aa15.06■□□□□ 0
CCDC59-202ENST00000547758 FNIP2Q9P278 1114 aa15.06■□□□□ 0
CCDC59-202ENST00000547758 SMG5Q9UPR3 1016 aaKnown RBP15.06■□□□□ 0
CCDC59-202ENST00000547758 IPPQ9Y573 584 aa15.06■□□□□ 0
CCDC59-202ENST00000547758 VWA8A3KMH1 1905 aa15.05■□□□□ 0
CCDC59-202ENST00000547758 ARL5CA6NH57 179 aa15.05■□□□□ -0
CCDC59-202ENST00000547758 PRPF3O43395 683 aaKnown RBP15.05■□□□□ -0
CCDC59-202ENST00000547758 NR1I2O75469 434 aa15.05■□□□□ -0
CCDC59-202ENST00000547758 ZMYND10O75800 440 aa15.05■□□□□ -0
CCDC59-202ENST00000547758 SRGAP2CP0DJJ0 459 aa15.05■□□□□ -0
CCDC59-202ENST00000547758 HOXB1P14653 301 aaPredicted RBP15.05■□□□□ -0
CCDC59-202ENST00000547758 MAGEA9P43362 315 aa15.05■□□□□ -0
CCDC59-202ENST00000547758 SCNN1GP51170 649 aa15.05■□□□□ -0
CCDC59-202ENST00000547758 USP41Q3LFD5 358 aa15.05■□□□□ -0
CCDC59-202ENST00000547758 Q4G0T1 1027 aa15.05■□□□□ -0
CCDC59-202ENST00000547758 FUT10Q6P4F1 479 aa15.05■□□□□ -0
CCDC59-202ENST00000547758 MTSS1LQ765P7 747 aa15.05■□□□□ -0
CCDC59-202ENST00000547758 GPR65Q8IYL9 337 aa15.05■□□□□ -0
CCDC59-202ENST00000547758 ZBTB44Q8NCP5 570 aa15.05■□□□□ -0
CCDC59-202ENST00000547758 PSPC1Q8WXF1 523 aaKnown RBP15.05■□□□□ -0
CCDC59-202ENST00000547758 SLC7A3Q8WY07 619 aa15.05■□□□□ -0
CCDC59-202ENST00000547758 COLEC11Q9BWP8 271 aa15.05■□□□□ -0
CCDC59-202ENST00000547758 EPC1Q9H2F5 836 aa15.05■□□□□ -0
CCDC59-202ENST00000547758 ZSCAN32Q9NX65 697 aa15.05■□□□□ -0
CCDC59-202ENST00000547758 CDH7Q9ULB5 785 aa15.05■□□□□ -0
CCDC59-202ENST00000547758 MTF2Q9Y483 593 aaPredicted RBP15.05■□□□□ -0
CCDC59-202ENST00000547758 CHD6Q8TD26 2715 aa15.04■□□□□ -0
CCDC59-202ENST00000547758 F5P12259 2224 aa15.04■□□□□ -0
CCDC59-202ENST00000547758 NID2Q14112 1375 aa15.04■□□□□ -0
CCDC59-202ENST00000547758 FAM170BA6NMN3 283 aa15.04■□□□□ -0
CCDC59-202ENST00000547758 RPL17P18621 184 aaKnown RBP15.04■□□□□ -0
CCDC59-202ENST00000547758 PSMC5P62195 406 aa15.04■□□□□ -0
CCDC59-202ENST00000547758 CREMQ03060 361 aa15.04■□□□□ -0
CCDC59-202ENST00000547758 ADCK5Q3MIX3 580 aa15.04■□□□□ -0
CCDC59-202ENST00000547758 SLC44A4Q53GD3 710 aa15.04■□□□□ -0
CCDC59-202ENST00000547758 RSPO2Q6UXX9 243 aaPredicted RBP15.04■□□□□ -0
CCDC59-202ENST00000547758 GRASPQ7Z6J2 395 aaPredicted RBP15.04■□□□□ -0
CCDC59-202ENST00000547758 TBCKQ8TEA7 893 aa15.04■□□□□ -0
CCDC59-202ENST00000547758 PRPF31Q8WWY3 499 aaKnown RBP15.04■□□□□ -0
CCDC59-202ENST00000547758 TMEM143Q96AN5 459 aa15.04■□□□□ -0
CCDC59-202ENST00000547758 ZFP42Q96MM3 310 aa15.04■□□□□ -0
CCDC59-202ENST00000547758 MBOAT7Q96N66 472 aa15.04■□□□□ -0
CCDC59-202ENST00000547758 RTKNQ9BST9 563 aa15.04■□□□□ -0
CCDC59-202ENST00000547758 EIF2AQ9BY44 585 aaKnown RBP15.04■□□□□ -0
CCDC59-202ENST00000547758 GPR62Q9BZJ7 368 aa15.04■□□□□ -0
CCDC59-202ENST00000547758 LTB4R2Q9NPC1 389 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms