RNA–Protein interactions for RNA: ENST00000547247.5

SMARCD1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best)

Gene SMARCD1, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-203ENST00000547247 NFKBIBQ15653 356 aa25.35■■□□□ 1.65
SMARCD1-203ENST00000547247 CCDC183Q5T5S1 534 aa25.35■■□□□ 1.65
SMARCD1-203ENST00000547247 ZNF598Q86UK7 904 aaKnown RBP25.35■■□□□ 1.65
SMARCD1-203ENST00000547247 SMYD4Q8IYR2 804 aaPredicted RBP25.35■■□□□ 1.65
SMARCD1-203ENST00000547247 HACE1Q8IYU2 909 aa25.35■■□□□ 1.65
SMARCD1-203ENST00000547247 GUF1Q8N442 669 aaKnown RBP25.35■■□□□ 1.65
SMARCD1-203ENST00000547247 RNF169Q8NCN4 708 aa25.35■■□□□ 1.65
SMARCD1-203ENST00000547247 SMG8Q8ND04 991 aaKnown RBP25.35■■□□□ 1.65
SMARCD1-203ENST00000547247 MAPK8IP1Q9UQF2 711 aa25.35■■□□□ 1.65
SMARCD1-203ENST00000547247 STYXL1Q9Y6J8 313 aa25.35■■□□□ 1.65
SMARCD1-203ENST00000547247 ZMYM2Q9UBW7 1377 aa25.34■■□□□ 1.65
SMARCD1-203ENST00000547247 TISP43B9A030 160 aa25.34■■□□□ 1.65
SMARCD1-203ENST00000547247 SKOR2Q2VWA4 1001 aaPredicted RBP25.34■■□□□ 1.65
SMARCD1-203ENST00000547247 TMCO2Q7Z6W1 182 aaPredicted RBP25.34■■□□□ 1.65
SMARCD1-203ENST00000547247 HERC6Q8IVU3 1022 aa25.34■■□□□ 1.65
SMARCD1-203ENST00000547247 SYAP1Q96A49 352 aaPredicted RBP25.34■■□□□ 1.65
SMARCD1-203ENST00000547247 NXF3Q9H4D5 531 aaKnown RBP25.34■■□□□ 1.65
SMARCD1-203ENST00000547247 HES2Q9Y543 173 aa25.34■■□□□ 1.65
SMARCD1-203ENST00000547247 GJB5O95377 273 aa25.33■■□□□ 1.65
SMARCD1-203ENST00000547247 HARSP12081 509 aaKnown RBP25.33■■□□□ 1.65
SMARCD1-203ENST00000547247 COBLL1Q53SF7 1204 aa25.33■■□□□ 1.65
SMARCD1-203ENST00000547247 FAM117BQ6P1L5 589 aa25.33■■□□□ 1.65
SMARCD1-203ENST00000547247 HS2ST1Q7LGA3 356 aa25.33■■□□□ 1.65
SMARCD1-203ENST00000547247 ZBED2Q9BTP6 218 aa25.33■■□□□ 1.65
SMARCD1-203ENST00000547247 HAPLN2Q9GZV7 340 aa25.33■■□□□ 1.65
SMARCD1-203ENST00000547247 TMEM63CQ9P1W3 806 aa25.33■■□□□ 1.65
SMARCD1-203ENST00000547247 A0A0B4J269 797 aa25.32■■□□□ 1.64
SMARCD1-203ENST00000547247 TGFB1I1O43294 461 aa25.32■■□□□ 1.64
SMARCD1-203ENST00000547247 ITGA4P13612 1032 aa25.32■■□□□ 1.64
SMARCD1-203ENST00000547247 PRCPP42785 496 aa25.32■■□□□ 1.64
SMARCD1-203ENST00000547247 SNRPFP62306 86 aaKnown RBP25.32■■□□□ 1.64
SMARCD1-203ENST00000547247 LRIT3Q3SXY7 679 aa25.32■■□□□ 1.64
SMARCD1-203ENST00000547247 CAVIN1Q6NZI2 390 aaKnown RBP25.32■■□□□ 1.64
SMARCD1-203ENST00000547247 RBM43Q6ZSC3 357 aaKnown RBP25.32■■□□□ 1.64
SMARCD1-203ENST00000547247 POMGNT1Q8WZA1 660 aa25.32■■□□□ 1.64
SMARCD1-203ENST00000547247 LPPQ93052 612 aa25.32■■□□□ 1.64
SMARCD1-203ENST00000547247 MSTO1Q9BUK6 570 aa25.32■■□□□ 1.64
SMARCD1-203ENST00000547247 PTPRSQ13332 1948 aa25.32■■□□□ 1.64
SMARCD1-203ENST00000547247 HSFX4A0A1B0GTS1 333 aaPredicted RBP25.31■■□□□ 1.64
SMARCD1-203ENST00000547247 HSFX3A0A1B0GWH4 333 aaPredicted RBP25.31■■□□□ 1.64
SMARCD1-203ENST00000547247 HOXA2O43364 376 aa25.31■■□□□ 1.64
SMARCD1-203ENST00000547247 BMP6P22004 513 aa25.31■■□□□ 1.64
SMARCD1-203ENST00000547247 ADSSP30520 456 aa25.31■■□□□ 1.64
SMARCD1-203ENST00000547247 THNSL1Q8IYQ7 743 aa25.31■■□□□ 1.64
SMARCD1-203ENST00000547247 APOL6Q9BWW8 343 aa25.31■■□□□ 1.64
SMARCD1-203ENST00000547247 RNF39Q9H2S5 420 aa25.31■■□□□ 1.64
SMARCD1-203ENST00000547247 SNTG2Q9NY99 539 aa25.31■■□□□ 1.64
SMARCD1-203ENST00000547247 CGNQ9P2M7 1197 aaKnown RBP25.31■■□□□ 1.64
SMARCD1-203ENST00000547247 OGTO15294 1046 aa25.31■■□□□ 1.64
SMARCD1-203ENST00000547247 DGKIO75912 1065 aa25.31■■□□□ 1.64
SMARCD1-203ENST00000547247 GARTP22102 1010 aa25.31■■□□□ 1.64
SMARCD1-203ENST00000547247 PPP1R2P41236 205 aa25.31■■□□□ 1.64
SMARCD1-203ENST00000547247 GRM5P41594 1212 aa25.31■■□□□ 1.64
SMARCD1-203ENST00000547247 STIM1Q13586 685 aa25.31■■□□□ 1.64
SMARCD1-203ENST00000547247 ARMCX5Q6P1M9 558 aa25.31■■□□□ 1.64
SMARCD1-203ENST00000547247 AGMOQ6ZNB7 445 aa25.31■■□□□ 1.64
SMARCD1-203ENST00000547247 CEP120Q8N960 986 aa25.31■■□□□ 1.64
SMARCD1-203ENST00000547247 GOLGA5Q8TBA6 731 aa25.31■■□□□ 1.64
SMARCD1-203ENST00000547247 CCDC94Q9BW85 323 aaPredicted RBP25.31■■□□□ 1.64
SMARCD1-203ENST00000547247 KCTD10Q9H3F6 313 aa25.31■■□□□ 1.64
SMARCD1-203ENST00000547247 UBN1Q9NPG3 1134 aa25.31■■□□□ 1.64
SMARCD1-203ENST00000547247 TYW1Q9NV66 732 aaKnown RBP25.31■■□□□ 1.64
SMARCD1-203ENST00000547247 AGO2Q9UKV8 859 aaKnown RBP25.31■■□□□ 1.64
SMARCD1-203ENST00000547247 MEIS3P2A8K0S8 358 aa25.3■■□□□ 1.64
SMARCD1-203ENST00000547247 PDXKO00764 312 aa25.3■■□□□ 1.64
SMARCD1-203ENST00000547247 FGFR1P11362 822 aa25.3■■□□□ 1.64
SMARCD1-203ENST00000547247 KYAT1Q16773 422 aa25.3■■□□□ 1.64
SMARCD1-203ENST00000547247 FAM109BQ6ICB4 259 aaPredicted RBP25.3■■□□□ 1.64
SMARCD1-203ENST00000547247 ADSSL1Q8N142 457 aa25.3■■□□□ 1.64
SMARCD1-203ENST00000547247 RSAD1Q9HA92 442 aa25.3■■□□□ 1.64
SMARCD1-203ENST00000547247 AGPAT3Q9NRZ7 376 aa25.3■■□□□ 1.64
SMARCD1-203ENST00000547247 PARP2Q9UGN5 583 aa25.3■■□□□ 1.64
SMARCD1-203ENST00000547247 GRXCR1A8MXD5 290 aa25.29■■□□□ 1.64
SMARCD1-203ENST00000547247 SOX1O00570 391 aaPredicted RBP25.29■■□□□ 1.64
SMARCD1-203ENST00000547247 TLL1O43897 1013 aa25.29■■□□□ 1.64
SMARCD1-203ENST00000547247 AKAP5P24588 427 aa25.29■■□□□ 1.64
SMARCD1-203ENST00000547247 OSTNP61366 133 aa25.29■■□□□ 1.64
SMARCD1-203ENST00000547247 ABI1Q8IZP0 508 aa25.29■■□□□ 1.64
SMARCD1-203ENST00000547247 YME1L1Q96TA2 773 aa25.29■■□□□ 1.64
SMARCD1-203ENST00000547247 RAD9AQ99638 391 aa25.29■■□□□ 1.64
SMARCD1-203ENST00000547247 CBWD1Q9BRT8 395 aa25.29■■□□□ 1.64
SMARCD1-203ENST00000547247 GIT1Q9Y2X7 761 aa25.29■■□□□ 1.64
SMARCD1-203ENST00000547247 INSL6Q9Y581 213 aa25.29■■□□□ 1.64
SMARCD1-203ENST00000547247 KIAA0391O15091 583 aaKnown RBP25.28■■□□□ 1.64
SMARCD1-203ENST00000547247 HTRA4P83105 476 aaPredicted RBP25.28■■□□□ 1.64
SMARCD1-203ENST00000547247 CLLU1OSQ5K130 101 aa25.28■■□□□ 1.64
SMARCD1-203ENST00000547247 GLB1LQ6UWU2 654 aa25.28■■□□□ 1.64
SMARCD1-203ENST00000547247 ACAP3Q96P50 834 aa25.28■■□□□ 1.64
SMARCD1-203ENST00000547247 RNF19AQ9NV58 838 aa25.28■■□□□ 1.64
SMARCD1-203ENST00000547247 CLIC2O15247 247 aa25.27■■□□□ 1.64
SMARCD1-203ENST00000547247 RECQL4O94761 1208 aa25.27■■□□□ 1.64
SMARCD1-203ENST00000547247 LDHAP00338 332 aaKnown RBP25.27■■□□□ 1.64
SMARCD1-203ENST00000547247 CLTAP09496 248 aa25.27■■□□□ 1.64
SMARCD1-203ENST00000547247 FXR1P51114 621 aaKnown RBP eCLIP25.27■■□□□ 1.64
SMARCD1-203ENST00000547247 YARSP54577 528 aaKnown RBP25.27■■□□□ 1.64
SMARCD1-203ENST00000547247 SEZ6Q53EL9 994 aa25.27■■□□□ 1.64
SMARCD1-203ENST00000547247 HELQQ8TDG4 1101 aa25.27■■□□□ 1.64
SMARCD1-203ENST00000547247 ZNF689Q96CS4 500 aaPredicted RBP25.27■■□□□ 1.64
SMARCD1-203ENST00000547247 TMEM117Q9H0C3 514 aa25.27■■□□□ 1.64
SMARCD1-203ENST00000547247 PCIF1Q9H4Z3 704 aa25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms