RNA–Protein interactions for RNA: ENST00000546215.5

SCARB1-211, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARB1, Length 1,597 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-211ENST00000546215 IKZF4Q9H2S9 585 aa22.77■■□□□ 1.24
SCARB1-211ENST00000546215 MSRAQ9UJ68 235 aa22.77■■□□□ 1.24
SCARB1-211ENST00000546215 PCDHA5Q9Y5H7 936 aa22.77■■□□□ 1.24
SCARB1-211ENST00000546215 FNDC1Q4ZHG4 1894 aaPredicted RBP22.77■■□□□ 1.24
SCARB1-211ENST00000546215 DNAJB2P25686 324 aa22.76■■□□□ 1.23
SCARB1-211ENST00000546215 HOXD13P35453 343 aa22.76■■□□□ 1.23
SCARB1-211ENST00000546215 MCL1Q07820 350 aa22.76■■□□□ 1.23
SCARB1-211ENST00000546215 ZNF568Q3ZCX4 644 aa22.76■■□□□ 1.23
SCARB1-211ENST00000546215 CLLU1OSQ5K130 101 aa22.76■■□□□ 1.23
SCARB1-211ENST00000546215 SP7Q8TDD2 431 aaPredicted RBP22.76■■□□□ 1.23
SCARB1-211ENST00000546215 SCFD1Q8WVM8 642 aa22.76■■□□□ 1.23
SCARB1-211ENST00000546215 TCHPQ9BT92 498 aa22.76■■□□□ 1.23
SCARB1-211ENST00000546215 ANKRD63C9JTQ0 380 aa22.76■■□□□ 1.23
SCARB1-211ENST00000546215 CLDN3O15551 220 aa22.76■■□□□ 1.23
SCARB1-211ENST00000546215 HOXA2O43364 376 aa22.76■■□□□ 1.23
SCARB1-211ENST00000546215 MCF2P10911 925 aa22.76■■□□□ 1.23
SCARB1-211ENST00000546215 ITGA4P13612 1032 aa22.76■■□□□ 1.23
SCARB1-211ENST00000546215 ZBTB33Q86T24 672 aa22.76■■□□□ 1.23
SCARB1-211ENST00000546215 GPT2Q8TD30 523 aa22.76■■□□□ 1.23
SCARB1-211ENST00000546215 CCDC47Q96A33 483 aaKnown RBP22.76■■□□□ 1.23
SCARB1-211ENST00000546215 CASD1Q96PB1 797 aa22.76■■□□□ 1.23
SCARB1-211ENST00000546215 GSDMAQ96QA5 445 aa22.76■■□□□ 1.23
SCARB1-211ENST00000546215 TMEM206Q9H813 350 aa22.76■■□□□ 1.23
SCARB1-211ENST00000546215 ANKFY1Q9P2R3 1169 aa22.76■■□□□ 1.23
SCARB1-211ENST00000546215 EXOC7Q9UPT5 735 aa22.76■■□□□ 1.23
SCARB1-211ENST00000546215 TISP43B9A030 160 aa22.75■■□□□ 1.23
SCARB1-211ENST00000546215 SMC2O95347 1197 aa22.75■■□□□ 1.23
SCARB1-211ENST00000546215 CA3P07451 260 aa22.75■■□□□ 1.23
SCARB1-211ENST00000546215 NOLC1Q14978 699 aaKnown RBP eCLIP22.75■■□□□ 1.23
SCARB1-211ENST00000546215 BMT2Q1RMZ1 405 aa22.75■■□□□ 1.23
SCARB1-211ENST00000546215 APBB1IPQ7Z5R6 666 aaPredicted RBP22.75■■□□□ 1.23
SCARB1-211ENST00000546215 LRCH3Q96II8 777 aa22.75■■□□□ 1.23
SCARB1-211ENST00000546215 TMEM117Q9H0C3 514 aa22.75■■□□□ 1.23
SCARB1-211ENST00000546215 STYXL1Q9Y6J8 313 aa22.75■■□□□ 1.23
SCARB1-211ENST00000546215 CDH23Q9H251 3354 aa22.74■■□□□ 1.23
SCARB1-211ENST00000546215 OFD1O75665 1012 aa22.74■■□□□ 1.23
SCARB1-211ENST00000546215 ARHGEF15O94989 841 aa22.74■■□□□ 1.23
SCARB1-211ENST00000546215 AKAP5P24588 427 aa22.74■■□□□ 1.23
SCARB1-211ENST00000546215 MCM4P33991 863 aa22.74■■□□□ 1.23
SCARB1-211ENST00000546215 CMTR2Q8IYT2 770 aaKnown RBP22.74■■□□□ 1.23
SCARB1-211ENST00000546215 HACE1Q8IYU2 909 aa22.74■■□□□ 1.23
SCARB1-211ENST00000546215 CEP120Q8N960 986 aa22.74■■□□□ 1.23
SCARB1-211ENST00000546215 HELQQ8TDG4 1101 aa22.74■■□□□ 1.23
SCARB1-211ENST00000546215 SMARCE1Q969G3 411 aa22.74■■□□□ 1.23
SCARB1-211ENST00000546215 TIFAQ96CG3 184 aa22.74■■□□□ 1.23
SCARB1-211ENST00000546215 APOL6Q9BWW8 343 aa22.74■■□□□ 1.23
SCARB1-211ENST00000546215 NKX2-4Q9H2Z4 354 aa22.74■■□□□ 1.23
SCARB1-211ENST00000546215 RSAD1Q9HA92 442 aa22.74■■□□□ 1.23
SCARB1-211ENST00000546215 UBN1Q9NPG3 1134 aa22.74■■□□□ 1.23
SCARB1-211ENST00000546215 SNTG2Q9NY99 539 aa22.74■■□□□ 1.23
SCARB1-211ENST00000546215 GIT1Q9Y2X7 761 aa22.74■■□□□ 1.23
SCARB1-211ENST00000546215 UBE4BO95155 1302 aa22.74■■□□□ 1.23
SCARB1-211ENST00000546215 A0A0B4J269 797 aa22.73■■□□□ 1.23
SCARB1-211ENST00000546215 TBKBP1A7MCY6 615 aa22.73■■□□□ 1.23
SCARB1-211ENST00000546215 ADSSP30520 456 aa22.73■■□□□ 1.23
SCARB1-211ENST00000546215 BTG3Q14201 252 aaPredicted RBP22.73■■□□□ 1.23
SCARB1-211ENST00000546215 CAMK4Q16566 473 aa22.73■■□□□ 1.23
SCARB1-211ENST00000546215 PAN2Q504Q3 1202 aaKnown RBP22.73■■□□□ 1.23
SCARB1-211ENST00000546215 SYCP3Q8IZU3 236 aa22.73■■□□□ 1.23
SCARB1-211ENST00000546215 RMND1Q9NWS8 449 aa22.73■■□□□ 1.23
SCARB1-211ENST00000546215 ZMYM2Q9UBW7 1377 aa22.73■■□□□ 1.23
SCARB1-211ENST00000546215 HARSP12081 509 aaKnown RBP22.72■■□□□ 1.23
SCARB1-211ENST00000546215 GRM5P41594 1212 aa22.72■■□□□ 1.23
SCARB1-211ENST00000546215 AFF1P51825 1210 aaKnown RBP22.72■■□□□ 1.23
SCARB1-211ENST00000546215 SLFN12LQ6IEE8 588 aa22.72■■□□□ 1.23
SCARB1-211ENST00000546215 GLB1LQ6UWU2 654 aa22.72■■□□□ 1.23
SCARB1-211ENST00000546215 ABI1Q8IZP0 508 aa22.72■■□□□ 1.23
SCARB1-211ENST00000546215 PARP2Q9UGN5 583 aa22.72■■□□□ 1.23
SCARB1-211ENST00000546215 GDAQ9Y2T3 454 aa22.72■■□□□ 1.23
SCARB1-211ENST00000546215 LINC01553A4QN01 128 aa22.72■■□□□ 1.23
SCARB1-211ENST00000546215 RECQL4O94761 1208 aa22.72■■□□□ 1.23
SCARB1-211ENST00000546215 MATR3P43243 847 aaKnown RBP eCLIP22.72■■□□□ 1.238e-7■■□□□ 13.5
SCARB1-211ENST00000546215 TAP1Q03518 808 aa22.72■■□□□ 1.23
SCARB1-211ENST00000546215 LRRC55Q6ZSA7 311 aa22.72■■□□□ 1.23
SCARB1-211ENST00000546215 NELFCDQ8IXH7 590 aa22.72■■□□□ 1.23
SCARB1-211ENST00000546215 TMEM192Q8IY95 271 aa22.72■■□□□ 1.23
SCARB1-211ENST00000546215 THNSL1Q8IYQ7 743 aa22.72■■□□□ 1.23
SCARB1-211ENST00000546215 RSPH1Q8WYR4 309 aa22.72■■□□□ 1.23
SCARB1-211ENST00000546215 GBP3Q9H0R5 595 aa22.72■■□□□ 1.23
SCARB1-211ENST00000546215 CLSTN2Q9H4D0 955 aa22.72■■□□□ 1.23
SCARB1-211ENST00000546215 ARL5CA6NH57 179 aa22.71■■□□□ 1.23
SCARB1-211ENST00000546215 INPPL1O15357 1258 aa22.71■■□□□ 1.23
SCARB1-211ENST00000546215 TGFB1I1O43294 461 aa22.71■■□□□ 1.23
SCARB1-211ENST00000546215 FAM189A1O60320 539 aa22.71■■□□□ 1.23
SCARB1-211ENST00000546215 LINC00271P0C7V0 271 aa22.71■■□□□ 1.23
SCARB1-211ENST00000546215 KNOP1Q1ED39 458 aaKnown RBP22.71■■□□□ 1.23
SCARB1-211ENST00000546215 NOMO2Q5JPE7 1267 aa22.71■■□□□ 1.23
SCARB1-211ENST00000546215 FIBCD1Q8N539 461 aa22.71■■□□□ 1.23
SCARB1-211ENST00000546215 GSTCDQ8NEC7 633 aa22.71■■□□□ 1.23
SCARB1-211ENST00000546215 ZFP42Q96MM3 310 aa22.71■■□□□ 1.23
SCARB1-211ENST00000546215 GAD1Q99259 594 aa22.71■■□□□ 1.23
SCARB1-211ENST00000546215 SLC28A3Q9HAS3 691 aa22.71■■□□□ 1.23
SCARB1-211ENST00000546215 OGTO15294 1046 aa22.7■■□□□ 1.22
SCARB1-211ENST00000546215 MLH1P40692 756 aa22.7■■□□□ 1.22
SCARB1-211ENST00000546215 FXR1P51114 621 aaKnown RBP eCLIP22.7■■□□□ 1.22
SCARB1-211ENST00000546215 OSTNP61366 133 aa22.7■■□□□ 1.22
SCARB1-211ENST00000546215 SEZ6Q53EL9 994 aa22.7■■□□□ 1.22
SCARB1-211ENST00000546215 ZNF658Q5TYW1 1059 aaPredicted RBP22.7■■□□□ 1.22
SCARB1-211ENST00000546215 PPP2R2DQ66LE6 453 aa22.7■■□□□ 1.22
SCARB1-211ENST00000546215 SPRED2Q7Z698 418 aa22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms