RNA–Protein interactions for RNA: ENST00000546006.5

CCDC189-212, Transcript of coiled-coil domain containing 189, humanhuman

TSL 2

Gene CCDC189, Length 1,533 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189-212ENST00000546006 ZNF623O75123 536 aa20.26■□□□□ 0.83
CCDC189-212ENST00000546006 AMHP03971 560 aa20.26■□□□□ 0.83
CCDC189-212ENST00000546006 HARSP12081 509 aaKnown RBP20.26■□□□□ 0.83
CCDC189-212ENST00000546006 KCNJ6P48051 423 aa20.26■□□□□ 0.83
CCDC189-212ENST00000546006 ZSCAN23Q3MJ62 389 aa20.26■□□□□ 0.83
CCDC189-212ENST00000546006 CENPPQ6IPU0 288 aa20.26■□□□□ 0.83
CCDC189-212ENST00000546006 KLHL10Q6JEL2 608 aa20.26■□□□□ 0.83
CCDC189-212ENST00000546006 ARMCX5Q6P1M9 558 aa20.26■□□□□ 0.83
CCDC189-212ENST00000546006 ECHDC2Q86YB7 292 aa20.26■□□□□ 0.83
CCDC189-212ENST00000546006 SMG8Q8ND04 991 aaKnown RBP20.26■□□□□ 0.83
CCDC189-212ENST00000546006 CBWD1Q9BRT8 395 aa20.26■□□□□ 0.83
CCDC189-212ENST00000546006 MSTO1Q9BUK6 570 aa20.26■□□□□ 0.83
CCDC189-212ENST00000546006 MTIF3Q9H2K0 278 aaKnown RBP20.26■□□□□ 0.83
CCDC189-212ENST00000546006 TRAF3IP3Q9Y228 551 aa20.26■□□□□ 0.83
CCDC189-212ENST00000546006 IPPQ9Y573 584 aa20.26■□□□□ 0.83
CCDC189-212ENST00000546006 SYCE3A1L190 88 aa20.25■□□□□ 0.83
CCDC189-212ENST00000546006 CLIC2O15247 247 aa20.25■□□□□ 0.83
CCDC189-212ENST00000546006 STX1AQ16623 288 aa20.25■□□□□ 0.83
CCDC189-212ENST00000546006 ZCWPW2Q504Y3 356 aa20.25■□□□□ 0.83
CCDC189-212ENST00000546006 C9orf50Q5SZB4 431 aa20.25■□□□□ 0.83
CCDC189-212ENST00000546006 RASIP1Q5U651 963 aa20.25■□□□□ 0.83
CCDC189-212ENST00000546006 MRPL10Q7Z7H8 261 aaKnown RBP20.25■□□□□ 0.83
CCDC189-212ENST00000546006 C12orf56Q8IXR9 622 aa20.25■□□□□ 0.83
CCDC189-212ENST00000546006 P2RX5Q93086 422 aa20.25■□□□□ 0.83
CCDC189-212ENST00000546006 ELAC1Q9H777 363 aaKnown RBP20.25■□□□□ 0.83
CCDC189-212ENST00000546006 ANO10Q9NW15 660 aa20.25■□□□□ 0.83
CCDC189-212ENST00000546006 CXXC1Q9P0U4 656 aaPredicted RBP20.25■□□□□ 0.83
CCDC189-212ENST00000546006 DACH1Q9UI36 760 aa20.25■□□□□ 0.83
CCDC189-212ENST00000546006 EOMESO95936 686 aa20.24■□□□□ 0.83
CCDC189-212ENST00000546006 ATF7P17544 494 aaPredicted RBP20.24■□□□□ 0.83
CCDC189-212ENST00000546006 IBSPP21815 317 aaPredicted RBP20.24■□□□□ 0.83
CCDC189-212ENST00000546006 CCNE1P24864 410 aa20.24■□□□□ 0.83
CCDC189-212ENST00000546006 BMP8BP34820 402 aa20.24■□□□□ 0.83
CCDC189-212ENST00000546006 DEFB103AP81534 67 aa20.24■□□□□ 0.83
CCDC189-212ENST00000546006 TYRO3Q06418 890 aa20.24■□□□□ 0.83
CCDC189-212ENST00000546006 PAK1Q13153 545 aa20.24■□□□□ 0.83
CCDC189-212ENST00000546006 SHHQ15465 462 aa20.24■□□□□ 0.83
CCDC189-212ENST00000546006 ZNF598Q86UK7 904 aaKnown RBP20.24■□□□□ 0.83
CCDC189-212ENST00000546006 NELFBQ8WX92 580 aa20.24■□□□□ 0.83
CCDC189-212ENST00000546006 PGBD4Q96DM1 585 aa20.24■□□□□ 0.83
CCDC189-212ENST00000546006 NXF3Q9H4D5 531 aaKnown RBP20.24■□□□□ 0.83
CCDC189-212ENST00000546006 PCIF1Q9H4Z3 704 aa20.24■□□□□ 0.83
CCDC189-212ENST00000546006 RNF216Q9NWF9 866 aaPredicted RBP20.24■□□□□ 0.83
CCDC189-212ENST00000546006 TMEM161AQ9NX61 479 aa20.24■□□□□ 0.83
CCDC189-212ENST00000546006 AGO2Q9UKV8 859 aaKnown RBP20.24■□□□□ 0.83
CCDC189-212ENST00000546006 CTNND2Q9UQB3 1225 aa20.24■□□□□ 0.83
CCDC189-212ENST00000546006 HES2Q9Y543 173 aa20.24■□□□□ 0.83
CCDC189-212ENST00000546006 KIAA0391O15091 583 aaKnown RBP20.23■□□□□ 0.83
CCDC189-212ENST00000546006 OGTO15294 1046 aa20.23■□□□□ 0.83
CCDC189-212ENST00000546006 FAM189A1O60320 539 aa20.23■□□□□ 0.83
CCDC189-212ENST00000546006 GRM5P41594 1212 aa20.23■□□□□ 0.83
CCDC189-212ENST00000546006 PMS1P54277 932 aaKnown RBP20.23■□□□□ 0.83
CCDC189-212ENST00000546006 NFIL3Q16649 462 aa20.23■□□□□ 0.83
CCDC189-212ENST00000546006 ANKRD40Q6AI12 368 aa20.23■□□□□ 0.83
CCDC189-212ENST00000546006 NPAS4Q8IUM7 802 aa20.23■□□□□ 0.83
CCDC189-212ENST00000546006 THNSL1Q8IYQ7 743 aa20.23■□□□□ 0.83
CCDC189-212ENST00000546006 HACE1Q8IYU2 909 aa20.23■□□□□ 0.83
CCDC189-212ENST00000546006 CRIPAKQ8N1N5 446 aa20.23■□□□□ 0.83
CCDC189-212ENST00000546006 CEP120Q8N960 986 aa20.23■□□□□ 0.83
CCDC189-212ENST00000546006 TMEM174Q8WUU8 243 aa20.23■□□□□ 0.83
CCDC189-212ENST00000546006 TOP1MTQ969P6 601 aa20.23■□□□□ 0.83
CCDC189-212ENST00000546006 TSG101Q99816 390 aa20.23■□□□□ 0.83
CCDC189-212ENST00000546006 HSPBP1Q9NZL4 362 aa20.23■□□□□ 0.83
CCDC189-212ENST00000546006 PCDHB7Q9Y5E2 793 aa20.23■□□□□ 0.83
CCDC189-212ENST00000546006 TTC3P53804 2025 aa20.23■□□□□ 0.83
CCDC189-212ENST00000546006 NR3C1P04150 777 aa20.22■□□□□ 0.83
CCDC189-212ENST00000546006 STAG3L1P0CL83 205 aa20.22■□□□□ 0.83
CCDC189-212ENST00000546006 ITGA4P13612 1032 aa20.22■□□□□ 0.83
CCDC189-212ENST00000546006 LRRC63Q05C16 580 aa20.22■□□□□ 0.83
CCDC189-212ENST00000546006 MYBPC2Q14324 1141 aa20.22■□□□□ 0.83
CCDC189-212ENST00000546006 KYAT1Q16773 422 aa20.22■□□□□ 0.83
CCDC189-212ENST00000546006 EDRF1Q3B7T1 1238 aa20.22■□□□□ 0.83
CCDC189-212ENST00000546006 CT47A1Q5JQC4 288 aaPredicted RBP20.22■□□□□ 0.83
CCDC189-212ENST00000546006 SLC9A9Q8IVB4 645 aa20.22■□□□□ 0.83
CCDC189-212ENST00000546006 RNF169Q8NCN4 708 aa20.22■□□□□ 0.83
CCDC189-212ENST00000546006 RNPC3Q96LT9 517 aaKnown RBP20.22■□□□□ 0.83
CCDC189-212ENST00000546006 FUCA2Q9BTY2 467 aa20.22■□□□□ 0.83
CCDC189-212ENST00000546006 CCDC94Q9BW85 323 aaPredicted RBP20.22■□□□□ 0.83
CCDC189-212ENST00000546006 APOL6Q9BWW8 343 aa20.22■□□□□ 0.83
CCDC189-212ENST00000546006 RNF39Q9H2S5 420 aa20.22■□□□□ 0.83
CCDC189-212ENST00000546006 SNTG2Q9NY99 539 aa20.22■□□□□ 0.83
CCDC189-212ENST00000546006 LRFN2Q9ULH4 789 aa20.22■□□□□ 0.83
CCDC189-212ENST00000546006 SLC4A7Q9Y6M7 1214 aa20.22■□□□□ 0.83
CCDC189-212ENST00000546006 BICDL2A1A5D9 508 aa20.22■□□□□ 0.83
CCDC189-212ENST00000546006 TRIM49BA6NDI0 452 aa20.22■□□□□ 0.83
CCDC189-212ENST00000546006 LDHAP00338 332 aaKnown RBP20.22■□□□□ 0.83
CCDC189-212ENST00000546006 CCDC192P0DO97 292 aa20.22■□□□□ 0.83
CCDC189-212ENST00000546006 OSTNP61366 133 aa20.22■□□□□ 0.83
CCDC189-212ENST00000546006 SEZ6Q53EL9 994 aa20.22■□□□□ 0.83
CCDC189-212ENST00000546006 ZBTB41Q5SVQ8 909 aa20.22■□□□□ 0.83
CCDC189-212ENST00000546006 PRPF38BQ5VTL8 546 aaKnown RBP20.22■□□□□ 0.83
CCDC189-212ENST00000546006 FOXR2Q6PJQ5 311 aa20.22■□□□□ 0.83
CCDC189-212ENST00000546006 PHOSPHO2Q8TCD6 241 aa20.22■□□□□ 0.83
CCDC189-212ENST00000546006 LPPQ93052 612 aa20.22■□□□□ 0.83
CCDC189-212ENST00000546006 SAAL1Q96ER3 474 aa20.22■□□□□ 0.83
CCDC189-212ENST00000546006 SLC9A7Q96T83 725 aa20.22■□□□□ 0.83
CCDC189-212ENST00000546006 DMAC2Q9NW81 257 aa20.22■□□□□ 0.83
CCDC189-212ENST00000546006 RWDD2AQ9UIY3 292 aa20.22■□□□□ 0.83
CCDC189-212ENST00000546006 RANBP2P49792 3224 aaKnown RBP20.22■□□□□ 0.83
CCDC189-212ENST00000546006 MEIS3P2A8K0S8 358 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms