RNA–Protein interactions for RNA: ENST00000545046.5

CHFR-224, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,186 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-224ENST00000545046 GRID2IPA4D2P6 1211 aa17.97■□□□□ 0.47
CHFR-224ENST00000545046 PDE2AO00408 941 aaPredicted RBP17.97■□□□□ 0.47
CHFR-224ENST00000545046 ATP8B1O43520 1251 aa17.97■□□□□ 0.47
CHFR-224ENST00000545046 ZRANB2O95218 330 aaKnown RBP eCLIP17.97■□□□□ 0.47
CHFR-224ENST00000545046 CXCR5P32302 372 aa17.97■□□□□ 0.47
CHFR-224ENST00000545046 USP8P40818 1118 aa17.97■□□□□ 0.47
CHFR-224ENST00000545046 GALCP54803 685 aa17.97■□□□□ 0.47
CHFR-224ENST00000545046 CAPSQ13938 189 aa17.97■□□□□ 0.47
CHFR-224ENST00000545046 CCL15Q16663 113 aa17.97■□□□□ 0.47
CHFR-224ENST00000545046 ATP8B4Q8TF62 1192 aa17.97■□□□□ 0.47
CHFR-224ENST00000545046 SCFD2Q8WU76 684 aa17.97■□□□□ 0.47
CHFR-224ENST00000545046 PRPF31Q8WWY3 499 aaKnown RBP17.97■□□□□ 0.47
CHFR-224ENST00000545046 PSPC1Q8WXF1 523 aaKnown RBP17.97■□□□□ 0.47
CHFR-224ENST00000545046 FNBP1Q96RU3 617 aa17.97■□□□□ 0.47
CHFR-224ENST00000545046 PNKPQ96T60 521 aa17.97■□□□□ 0.47
CHFR-224ENST00000545046 PSMB7Q99436 277 aa17.97■□□□□ 0.47
CHFR-224ENST00000545046 TOPORSQ9NS56 1045 aaPredicted RBP17.97■□□□□ 0.47
CHFR-224ENST00000545046 RNF14Q9UBS8 474 aa17.97■□□□□ 0.47
CHFR-224ENST00000545046 ADCY3O60266 1144 aa17.97■□□□□ 0.47
CHFR-224ENST00000545046 SLC26A2P50443 739 aa17.97■□□□□ 0.47
CHFR-224ENST00000545046 EFNA5P52803 228 aa17.97■□□□□ 0.47
CHFR-224ENST00000545046 FKBP1BP68106 108 aa17.97■□□□□ 0.47
CHFR-224ENST00000545046 ITIH3Q06033 890 aa17.97■□□□□ 0.47
CHFR-224ENST00000545046 CCDC70Q6NSX1 233 aa17.97■□□□□ 0.47
CHFR-224ENST00000545046 SV2AQ7L0J3 742 aa17.97■□□□□ 0.47
CHFR-224ENST00000545046 ZNF572Q7Z3I7 529 aaPredicted RBP17.97■□□□□ 0.47
CHFR-224ENST00000545046 DNAAF5Q86Y56 855 aa17.97■□□□□ 0.47
CHFR-224ENST00000545046 MS4A4AQ96JQ5 239 aa17.97■□□□□ 0.47
CHFR-224ENST00000545046 JPH2Q9BR39 696 aaPredicted RBP17.97■□□□□ 0.47
CHFR-224ENST00000545046 SMARCAD1Q9H4L7 1026 aa17.97■□□□□ 0.47
CHFR-224ENST00000545046 TMCO5BA8MYB1 307 aa17.96■□□□□ 0.47
CHFR-224ENST00000545046 BTBD19C9JJ37 291 aa17.96■□□□□ 0.47
CHFR-224ENST00000545046 SEC31AO94979 1220 aaKnown RBP17.96■□□□□ 0.47
CHFR-224ENST00000545046 MKRN3Q13064 507 aaKnown RBP17.96■□□□□ 0.47
CHFR-224ENST00000545046 PSMD6Q15008 389 aa17.96■□□□□ 0.47
CHFR-224ENST00000545046 ARMCX2Q7L311 632 aa17.96■□□□□ 0.47
CHFR-224ENST00000545046 OLIG1Q8TAK6 271 aa17.96■□□□□ 0.47
CHFR-224ENST00000545046 TAS1R2Q8TE23 839 aa17.96■□□□□ 0.47
CHFR-224ENST00000545046 CTNNBL1Q8WYA6 563 aaPredicted RBP17.96■□□□□ 0.47
CHFR-224ENST00000545046 TAF4BQ92750 862 aa17.96■□□□□ 0.47
CHFR-224ENST00000545046 COPS5Q92905 334 aa17.96■□□□□ 0.47
CHFR-224ENST00000545046 TARS2Q9BW92 718 aaKnown RBP17.96■□□□□ 0.47
CHFR-224ENST00000545046 SUGCTQ9HAC7 445 aa17.96■□□□□ 0.47
CHFR-224ENST00000545046 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.96■□□□□ 0.47
CHFR-224ENST00000545046 DIS3Q9Y2L1 958 aaKnown RBP17.96■□□□□ 0.47
CHFR-224ENST00000545046 TMEM253P0C7T8 217 aa17.96■□□□□ 0.46
CHFR-224ENST00000545046 MCM3P25205 808 aa17.96■□□□□ 0.46
CHFR-224ENST00000545046 GCLCP48506 637 aaPredicted RBP17.96■□□□□ 0.46
CHFR-224ENST00000545046 MXD4Q14582 209 aaPredicted RBP17.96■□□□□ 0.46
CHFR-224ENST00000545046 PLCB4Q15147 1175 aa17.96■□□□□ 0.46
CHFR-224ENST00000545046 ANKRD23Q86SG2 305 aa17.96■□□□□ 0.46
CHFR-224ENST00000545046 TRIM50Q86XT4 487 aa17.96■□□□□ 0.46
CHFR-224ENST00000545046 FAM71AQ8IYT1 594 aa17.96■□□□□ 0.46
CHFR-224ENST00000545046 HNRNPLLQ8WVV9 542 aaKnown RBP17.96■□□□□ 0.46
CHFR-224ENST00000545046 KAT5Q92993 513 aa17.96■□□□□ 0.46
CHFR-224ENST00000545046 MSTO1Q9BUK6 570 aa17.96■□□□□ 0.46
CHFR-224ENST00000545046 GBA2Q9HCG7 927 aaPredicted RBP17.96■□□□□ 0.46
CHFR-224ENST00000545046 PDGFCQ9NRA1 345 aa17.96■□□□□ 0.46
CHFR-224ENST00000545046 IVNS1ABPQ9Y6Y0 642 aa17.96■□□□□ 0.46
CHFR-224ENST00000545046 STRNO43815 780 aa17.95■□□□□ 0.46
CHFR-224ENST00000545046 ZC3H11AO75152 810 aaKnown RBP eCLIP17.95■□□□□ 0.46
CHFR-224ENST00000545046 TNNI1P19237 187 aa17.95■□□□□ 0.46
CHFR-224ENST00000545046 ACOT2P49753 483 aa17.95■□□□□ 0.46
CHFR-224ENST00000545046 NLRP11P59045 1033 aaKnown RBP17.95■□□□□ 0.46
CHFR-224ENST00000545046 CBX1P83916 185 aa17.95■□□□□ 0.46
CHFR-224ENST00000545046 C2orf54Q08AI8 447 aa17.95■□□□□ 0.46
CHFR-224ENST00000545046 ZNF792Q3KQV3 632 aa17.95■□□□□ 0.46
CHFR-224ENST00000545046 CFAP221Q4G0U5 840 aa17.95■□□□□ 0.46
CHFR-224ENST00000545046 SYCE1Q8N0S2 351 aa17.95■□□□□ 0.46
CHFR-224ENST00000545046 TPCN2Q8NHX9 752 aa17.95■□□□□ 0.46
CHFR-224ENST00000545046 ZBTB45Q96K62 511 aaPredicted RBP17.95■□□□□ 0.46
CHFR-224ENST00000545046 FAM81BQ96LP2 452 aa17.95■□□□□ 0.46
CHFR-224ENST00000545046 KREMEN1Q96MU8 473 aa17.95■□□□□ 0.46
CHFR-224ENST00000545046 ANKFY1Q9P2R3 1169 aa17.95■□□□□ 0.46
CHFR-224ENST00000545046 TRPC6Q9Y210 931 aa17.95■□□□□ 0.46
CHFR-224ENST00000545046 ADORA2AP29274 412 aa17.94■□□□□ 0.46
CHFR-224ENST00000545046 RPS6KA1Q15418 735 aa17.94■□□□□ 0.46
CHFR-224ENST00000545046 WDR93Q6P2C0 686 aa17.94■□□□□ 0.46
CHFR-224ENST00000545046 MMGT1Q8N4V1 131 aa17.94■□□□□ 0.46
CHFR-224ENST00000545046 C2orf69Q8N8R5 385 aa17.94■□□□□ 0.46
CHFR-224ENST00000545046 SHC3Q92529 594 aa17.94■□□□□ 0.46
CHFR-224ENST00000545046 A0A0B4J269 797 aa17.94■□□□□ 0.46
CHFR-224ENST00000545046 TARSL2A2RTX5 802 aaKnown RBP17.94■□□□□ 0.46
CHFR-224ENST00000545046 NCANO14594 1321 aa17.94■□□□□ 0.46
CHFR-224ENST00000545046 HBP1O60381 514 aa17.94■□□□□ 0.46
CHFR-224ENST00000545046 CLDN10P78369 228 aa17.94■□□□□ 0.46
CHFR-224ENST00000545046 LAMTOR4Q0VGL1 99 aa17.94■□□□□ 0.46
CHFR-224ENST00000545046 DRP2Q13474 957 aa17.94■□□□□ 0.46
CHFR-224ENST00000545046 PRPF4BQ13523 1007 aaKnown RBP17.94■□□□□ 0.46
CHFR-224ENST00000545046 ENOSF1Q7L5Y1 443 aa17.94■□□□□ 0.46
CHFR-224ENST00000545046 ZBTB8OSQ8IWT0 167 aa17.94■□□□□ 0.46
CHFR-224ENST00000545046 RPUSD2Q8IZ73 545 aaKnown RBP17.94■□□□□ 0.46
CHFR-224ENST00000545046 ABRAQ8N0Z2 381 aa17.94■□□□□ 0.46
CHFR-224ENST00000545046 SPATA4Q8NEY3 305 aa17.94■□□□□ 0.46
CHFR-224ENST00000545046 HELQQ8TDG4 1101 aa17.94■□□□□ 0.46
CHFR-224ENST00000545046 SLC20A1Q8WUM9 679 aa17.94■□□□□ 0.46
CHFR-224ENST00000545046 BRI3BPQ8WY22 251 aa17.94■□□□□ 0.46
CHFR-224ENST00000545046 HAPLN2Q9GZV7 340 aa17.94■□□□□ 0.46
CHFR-224ENST00000545046 VTA1Q9NP79 307 aa17.94■□□□□ 0.46
CHFR-224ENST00000545046 RBAKQ9NYW8 714 aaPredicted RBP17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms