RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 SNX29Q8TEQ0 813 aa8.18□□□□□ -1.1
CPSF7-224ENST00000544990 PPM1EQ8WY54 764 aa8.18□□□□□ -1.1
CPSF7-224ENST00000544990 C17orf80Q9BSJ5 609 aa8.18□□□□□ -1.1
CPSF7-224ENST00000544990 IFT122Q9HBG6 1241 aa8.18□□□□□ -1.1
CPSF7-224ENST00000544990 MTCH2Q9Y6C9 303 aa8.18□□□□□ -1.1
CPSF7-224ENST00000544990 FNDC1Q4ZHG4 1894 aaPredicted RBP8.17□□□□□ -1.1
CPSF7-224ENST00000544990 COL6A3P12111 3177 aa8.17□□□□□ -1.1
CPSF7-224ENST00000544990 A0A087WWV3 80 aa8.17□□□□□ -1.1
CPSF7-224ENST00000544990 A0A0U1RQF3 1178 aa8.17□□□□□ -1.1
CPSF7-224ENST00000544990 EPOPA6NHQ4 379 aa8.17□□□□□ -1.1
CPSF7-224ENST00000544990 H3BNC9 293 aa8.17□□□□□ -1.1
CPSF7-224ENST00000544990 PRMT3O60678 531 aa8.17□□□□□ -1.1
CPSF7-224ENST00000544990 USO1O60763 962 aaKnown RBP8.17□□□□□ -1.1
CPSF7-224ENST00000544990 CSDE1O75534 798 aaKnown RBP8.17□□□□□ -1.1
CPSF7-224ENST00000544990 ERLIN2O94905 339 aa8.17□□□□□ -1.1
CPSF7-224ENST00000544990 DKK1O94907 266 aa8.17□□□□□ -1.1
CPSF7-224ENST00000544990 SYT1P21579 422 aa8.17□□□□□ -1.1
CPSF7-224ENST00000544990 FGFR4P22455 802 aa8.17□□□□□ -1.1
CPSF7-224ENST00000544990 CTNNB1P35222 781 aa8.17□□□□□ -1.1
CPSF7-224ENST00000544990 BMPR1AP36894 532 aa8.17□□□□□ -1.1
CPSF7-224ENST00000544990 GDF10P55107 478 aa8.17□□□□□ -1.1
CPSF7-224ENST00000544990 GPM6BQ13491 265 aa8.17□□□□□ -1.1
CPSF7-224ENST00000544990 CCDC85BQ15834 202 aaPredicted RBP8.17□□□□□ -1.1
CPSF7-224ENST00000544990 PTPROQ16827 1216 aa8.17□□□□□ -1.1
CPSF7-224ENST00000544990 PAN2Q504Q3 1202 aaKnown RBP8.17□□□□□ -1.1
CPSF7-224ENST00000544990 SPOUT1Q5T280 376 aaKnown RBP8.17□□□□□ -1.1
CPSF7-224ENST00000544990 TWF2Q6IBS0 349 aaKnown RBP8.17□□□□□ -1.1
CPSF7-224ENST00000544990 SPRED2Q7Z698 418 aa8.17□□□□□ -1.1
CPSF7-224ENST00000544990 ECHDC2Q86YB7 292 aa8.17□□□□□ -1.1
CPSF7-224ENST00000544990 ABI1Q8IZP0 508 aa8.17□□□□□ -1.1
CPSF7-224ENST00000544990 MICALL1Q8N3F8 863 aa8.17□□□□□ -1.1
CPSF7-224ENST00000544990 GDPD5Q8WTR4 605 aa8.17□□□□□ -1.1
CPSF7-224ENST00000544990 C11orf84Q9BUA3 381 aaPredicted RBP8.17□□□□□ -1.1
CPSF7-224ENST00000544990 PLVAPQ9BX97 442 aa8.17□□□□□ -1.1
CPSF7-224ENST00000544990 RC3H2Q9HBD1 1191 aaKnown RBP8.17□□□□□ -1.1
CPSF7-224ENST00000544990 XPNPEP1Q9NQW7 623 aa8.17□□□□□ -1.1
CPSF7-224ENST00000544990 AAASQ9NRG9 546 aa8.17□□□□□ -1.1
CPSF7-224ENST00000544990 DNM3Q9UQ16 869 aa8.17□□□□□ -1.1
CPSF7-224ENST00000544990 PIN4Q9Y237 131 aaKnown RBP8.17□□□□□ -1.1
CPSF7-224ENST00000544990 VWA3AA6NCI4 1184 aa8.16□□□□□ -1.1
CPSF7-224ENST00000544990 TBKBP1A7MCY6 615 aa8.16□□□□□ -1.1
CPSF7-224ENST00000544990 C5orf67F2Z3F1 127 aa8.16□□□□□ -1.1
CPSF7-224ENST00000544990 INO80B-WBP1J3KQ70 363 aa8.16□□□□□ -1.1
CPSF7-224ENST00000544990 LPXNO60711 386 aa8.16□□□□□ -1.1
CPSF7-224ENST00000544990 CYP11B2P19099 503 aa8.16□□□□□ -1.1
CPSF7-224ENST00000544990 AXLP30530 894 aa8.16□□□□□ -1.1
CPSF7-224ENST00000544990 ARL2P36404 184 aa8.16□□□□□ -1.1
CPSF7-224ENST00000544990 RAB27AP51159 221 aa8.16□□□□□ -1.1
CPSF7-224ENST00000544990 COL4A4P53420 1690 aaPredicted RBP8.16□□□□□ -1.1
CPSF7-224ENST00000544990 PTENP60484 403 aa8.16□□□□□ -1.1
CPSF7-224ENST00000544990 PPP2R5AQ15172 486 aa8.16□□□□□ -1.1
CPSF7-224ENST00000544990 NAALADL2Q58DX5 795 aa8.16□□□□□ -1.1
CPSF7-224ENST00000544990 FAM102BQ5T8I3 360 aa8.16□□□□□ -1.1
CPSF7-224ENST00000544990 MAEAQ7L5Y9 396 aa8.16□□□□□ -1.1
CPSF7-224ENST00000544990 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.16□□□□□ -1.1
CPSF7-224ENST00000544990 RNF169Q8NCN4 708 aa8.16□□□□□ -1.1
CPSF7-224ENST00000544990 RSPH1Q8WYR4 309 aa8.16□□□□□ -1.1
CPSF7-224ENST00000544990 P2RX5Q93086 422 aa8.16□□□□□ -1.1
CPSF7-224ENST00000544990 PGBD4Q96DM1 585 aa8.16□□□□□ -1.1
CPSF7-224ENST00000544990 CDK5RAP3Q96JB5 506 aa8.16□□□□□ -1.1
CPSF7-224ENST00000544990 PRIMPOLQ96LW4 560 aa8.16□□□□□ -1.1
CPSF7-224ENST00000544990 AK8Q96MA6 479 aa8.16□□□□□ -1.1
CPSF7-224ENST00000544990 NFKBIZQ9BYH8 718 aa8.16□□□□□ -1.1
CPSF7-224ENST00000544990 TMEM117Q9H0C3 514 aa8.16□□□□□ -1.1
CPSF7-224ENST00000544990 NT5C3AQ9H0P0 336 aa8.16□□□□□ -1.1
CPSF7-224ENST00000544990 LMAN2LQ9H0V9 348 aa8.16□□□□□ -1.1
CPSF7-224ENST00000544990 POLR3FQ9H1D9 316 aaPredicted RBP8.16□□□□□ -1.1
CPSF7-224ENST00000544990 BHMT2Q9H2M3 363 aa8.16□□□□□ -1.1
CPSF7-224ENST00000544990 ZSCAN16Q9H4T2 348 aaPredicted RBP8.16□□□□□ -1.1
CPSF7-224ENST00000544990 AGPAT5Q9NUQ2 364 aa8.16□□□□□ -1.1
CPSF7-224ENST00000544990 DDX19AQ9NUU7 478 aaKnown RBP8.16□□□□□ -1.1
CPSF7-224ENST00000544990 ZNF358Q9NW07 568 aa8.16□□□□□ -1.1
CPSF7-224ENST00000544990 PCDHB12Q9Y5F1 795 aa8.16□□□□□ -1.1
CPSF7-224ENST00000544990 LAMA2P24043 3122 aaKnown RBP8.16□□□□□ -1.1
CPSF7-224ENST00000544990 LRRIQ4A6NIV6 560 aa8.15□□□□□ -1.1
CPSF7-224ENST00000544990 SLC26A4O43511 780 aa8.15□□□□□ -1.1
CPSF7-224ENST00000544990 STX6O43752 255 aa8.15□□□□□ -1.1
CPSF7-224ENST00000544990 LILRA1O75019 489 aa8.15□□□□□ -1.1
CPSF7-224ENST00000544990 ZNF623O75123 536 aa8.15□□□□□ -1.1
CPSF7-224ENST00000544990 EYA4O95677 639 aa8.15□□□□□ -1.1
CPSF7-224ENST00000544990 FGFR1P11362 822 aa8.15□□□□□ -1.1
CPSF7-224ENST00000544990 GLRA2P23416 452 aa8.15□□□□□ -1.1
CPSF7-224ENST00000544990 CDC25AP30304 524 aa8.15□□□□□ -1.1
CPSF7-224ENST00000544990 CAPSQ13938 189 aa8.15□□□□□ -1.1
CPSF7-224ENST00000544990 SF3A1Q15459 793 aaKnown RBP8.15□□□□□ -1.1
CPSF7-224ENST00000544990 ZRSR1Q15695 479 aaKnown RBP8.15□□□□□ -1.1
CPSF7-224ENST00000544990 IL17AQ16552 155 aa8.15□□□□□ -1.1
CPSF7-224ENST00000544990 ECM1Q16610 540 aa8.15□□□□□ -1.1
CPSF7-224ENST00000544990 ZBTB8OSQ8IWT0 167 aa8.15□□□□□ -1.1
CPSF7-224ENST00000544990 TSEN2Q8NCE0 465 aaKnown RBP8.15□□□□□ -1.1
CPSF7-224ENST00000544990 CNNM3Q8NE01 707 aa8.15□□□□□ -1.1
CPSF7-224ENST00000544990 ASAP3Q8TDY4 903 aa8.15□□□□□ -1.1
CPSF7-224ENST00000544990 KIFAP3Q92845 792 aa8.15□□□□□ -1.1
CPSF7-224ENST00000544990 MRPL38Q96DV4 380 aaKnown RBP8.15□□□□□ -1.1
CPSF7-224ENST00000544990 CALML4Q96GE6 196 aa8.15□□□□□ -1.1
CPSF7-224ENST00000544990 IFT74Q96LB3 600 aa8.15□□□□□ -1.1
CPSF7-224ENST00000544990 MRPL9Q9BYD2 267 aaKnown RBP8.15□□□□□ -1.1
CPSF7-224ENST00000544990 C2orf40Q9H1Z8 148 aa8.15□□□□□ -1.1
CPSF7-224ENST00000544990 MINDY3Q9H8M7 445 aa8.15□□□□□ -1.1
CPSF7-224ENST00000544990 FAM105AQ9NUU6 356 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms