RNA–Protein interactions for RNA: ENST00000544669.5

CPSF7-223, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,800 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-223ENST00000544669 BBOF1Q8ND07 529 aa14.01□□□□□ -0.17
CPSF7-223ENST00000544669 SYTL5Q8TDW5 730 aaPredicted RBP14.01□□□□□ -0.17
CPSF7-223ENST00000544669 KCNN1Q92952 543 aa14.01□□□□□ -0.17
CPSF7-223ENST00000544669 MFSD14AQ96MC6 490 aa14.01□□□□□ -0.17
CPSF7-223ENST00000544669 FBXL18Q96ME1 805 aa14.01□□□□□ -0.17
CPSF7-223ENST00000544669 DPH5Q9H2P9 285 aa14.01□□□□□ -0.17
CPSF7-223ENST00000544669 PCIF1Q9H4Z3 704 aa14.01□□□□□ -0.17
CPSF7-223ENST00000544669 POLD4Q9HCU8 107 aa14.01□□□□□ -0.17
CPSF7-223ENST00000544669 AVENQ9NQS1 362 aaPredicted RBP14.01□□□□□ -0.17
CPSF7-223ENST00000544669 ZDHHC18Q9NUE0 388 aa14.01□□□□□ -0.17
CPSF7-223ENST00000544669 ZNF219Q9P2Y4 722 aaPredicted RBP14.01□□□□□ -0.17
CPSF7-223ENST00000544669 NOVA2Q9UNW9 492 aaKnown RBP14.01□□□□□ -0.17
CPSF7-223ENST00000544669 ATP8A1Q9Y2Q0 1164 aa14.01□□□□□ -0.17
CPSF7-223ENST00000544669 PCDHA10Q9Y5I2 948 aa14.01□□□□□ -0.17
CPSF7-223ENST00000544669 ZNF646O15015 1829 aaPredicted RBP14□□□□□ -0.17
CPSF7-223ENST00000544669 H0YHG0 523 aa14□□□□□ -0.17
CPSF7-223ENST00000544669 DDX39AO00148 427 aaKnown RBP14□□□□□ -0.17
CPSF7-223ENST00000544669 RARGP13631 454 aa14□□□□□ -0.17
CPSF7-223ENST00000544669 POLD1P28340 1107 aa14□□□□□ -0.17
CPSF7-223ENST00000544669 CNGA1P29973 690 aa14□□□□□ -0.17
CPSF7-223ENST00000544669 CCND2P30279 289 aa14□□□□□ -0.17
CPSF7-223ENST00000544669 CHRNA5P30532 468 aa14□□□□□ -0.17
CPSF7-223ENST00000544669 CETN2P41208 172 aa14□□□□□ -0.17
CPSF7-223ENST00000544669 PEX5P50542 639 aa14□□□□□ -0.17
CPSF7-223ENST00000544669 OAZ1P54368 228 aa14□□□□□ -0.17
CPSF7-223ENST00000544669 PEX3P56589 373 aa14□□□□□ -0.17
CPSF7-223ENST00000544669 ACAD10Q6JQN1 1059 aa14□□□□□ -0.17
CPSF7-223ENST00000544669 CCDC137Q6PK04 289 aaKnown RBP14□□□□□ -0.17
CPSF7-223ENST00000544669 CCDC121Q6ZUS5 278 aa14□□□□□ -0.17
CPSF7-223ENST00000544669 SUGP1Q8IWZ8 645 aaKnown RBP14□□□□□ -0.17
CPSF7-223ENST00000544669 NIM1KQ8IY84 436 aa14□□□□□ -0.17
CPSF7-223ENST00000544669 PPM1KQ8N3J5 372 aa14□□□□□ -0.17
CPSF7-223ENST00000544669 ANKS4BQ8N8V4 417 aa14□□□□□ -0.17
CPSF7-223ENST00000544669 ZNF564Q8TBZ8 553 aaPredicted RBP14□□□□□ -0.17
CPSF7-223ENST00000544669 PARD3BQ8TEW8 1205 aa14□□□□□ -0.17
CPSF7-223ENST00000544669 TLCD1Q96CP7 247 aa14□□□□□ -0.17
CPSF7-223ENST00000544669 IFT74Q96LB3 600 aa14□□□□□ -0.17
CPSF7-223ENST00000544669 AGBL1Q96MI9 1066 aa14□□□□□ -0.17
CPSF7-223ENST00000544669 CBWD1Q9BRT8 395 aa14□□□□□ -0.17
CPSF7-223ENST00000544669 MOV10L1Q9BXT6 1211 aaKnown RBP14□□□□□ -0.17
CPSF7-223ENST00000544669 ZNF341Q9BYN7 854 aa14□□□□□ -0.17
CPSF7-223ENST00000544669 LRRC19Q9H756 370 aa14□□□□□ -0.17
CPSF7-223ENST00000544669 KMT5AQ9NQR1 393 aa14□□□□□ -0.17
CPSF7-223ENST00000544669 RAB20Q9NX57 234 aa14□□□□□ -0.17
CPSF7-223ENST00000544669 NOCTQ9UK39 431 aaKnown RBP14□□□□□ -0.17
CPSF7-223ENST00000544669 COG5Q9UP83 839 aa14□□□□□ -0.17
CPSF7-223ENST00000544669 C5orf60A6NFR6 353 aa13.99□□□□□ -0.17
CPSF7-223ENST00000544669 DGAT1O75907 488 aa13.99□□□□□ -0.17
CPSF7-223ENST00000544669 ALAS1P13196 640 aa13.99□□□□□ -0.17
CPSF7-223ENST00000544669 CYP11B1P15538 503 aa13.99□□□□□ -0.17
CPSF7-223ENST00000544669 COMTP21964 271 aa13.99□□□□□ -0.17
CPSF7-223ENST00000544669 MESDQ14696 234 aa13.99□□□□□ -0.17
CPSF7-223ENST00000544669 PGM5Q15124 567 aa13.99□□□□□ -0.17
CPSF7-223ENST00000544669 FAM102BQ5T8I3 360 aa13.99□□□□□ -0.17
CPSF7-223ENST00000544669 DCAF12L1Q5VU92 463 aa13.99□□□□□ -0.17
CPSF7-223ENST00000544669 MSL1Q68DK7 614 aa13.99□□□□□ -0.17
CPSF7-223ENST00000544669 TRIM72Q6ZMU5 477 aa13.99□□□□□ -0.17
CPSF7-223ENST00000544669 MMS22LQ6ZRQ5 1243 aa13.99□□□□□ -0.17
CPSF7-223ENST00000544669 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.99□□□□□ -0.17
CPSF7-223ENST00000544669 SLC13A5Q86YT5 568 aaPredicted RBP13.99□□□□□ -0.17
CPSF7-223ENST00000544669 ARHGEF19Q8IW93 802 aa13.99□□□□□ -0.17
CPSF7-223ENST00000544669 CCDC105Q8IYK2 499 aa13.99□□□□□ -0.17
CPSF7-223ENST00000544669 ATP8B4Q8TF62 1192 aa13.99□□□□□ -0.17
CPSF7-223ENST00000544669 CD101Q93033 1021 aa13.99□□□□□ -0.17
CPSF7-223ENST00000544669 CELF4Q9BZC1 486 aaKnown RBP13.99□□□□□ -0.17
CPSF7-223ENST00000544669 NEUROG2Q9H2A3 272 aa13.99□□□□□ -0.17
CPSF7-223ENST00000544669 PLEKHA4Q9H4M7 779 aa13.99□□□□□ -0.17
CPSF7-223ENST00000544669 STK32BQ9NY57 414 aa13.99□□□□□ -0.17
CPSF7-223ENST00000544669 WHRNQ9P202 907 aa13.99□□□□□ -0.17
CPSF7-223ENST00000544669 TRPC6Q9Y210 931 aa13.99□□□□□ -0.17
CPSF7-223ENST00000544669 SCN9AQ15858 1988 aa13.99□□□□□ -0.17
CPSF7-223ENST00000544669 RGS16O15492 202 aaPredicted RBP13.99□□□□□ -0.17
CPSF7-223ENST00000544669 C21orf2O43822 256 aa13.99□□□□□ -0.17
CPSF7-223ENST00000544669 ECEL1O95672 775 aa13.99□□□□□ -0.17
CPSF7-223ENST00000544669 ITIH2P19823 946 aa13.99□□□□□ -0.17
CPSF7-223ENST00000544669 COILP38432 576 aaPredicted RBP13.99□□□□□ -0.17
CPSF7-223ENST00000544669 PTGIRP43119 386 aa13.99□□□□□ -0.17
CPSF7-223ENST00000544669 PLTPP55058 493 aa13.99□□□□□ -0.17
CPSF7-223ENST00000544669 MAGOHP61326 146 aaKnown RBP13.99□□□□□ -0.17
CPSF7-223ENST00000544669 DLG4P78352 724 aa13.99□□□□□ -0.17
CPSF7-223ENST00000544669 PTP4A2Q12974 167 aa13.99□□□□□ -0.17
CPSF7-223ENST00000544669 ZYXQ15942 572 aaKnown RBP13.99□□□□□ -0.17
CPSF7-223ENST00000544669 SKIDA1Q1XH10 827 aa13.99□□□□□ -0.17
CPSF7-223ENST00000544669 WDR44Q5JSH3 913 aa13.99□□□□□ -0.17
CPSF7-223ENST00000544669 ARHGEF16Q5VV41 709 aa13.99□□□□□ -0.17
CPSF7-223ENST00000544669 RNF207Q6ZRF8 634 aa13.99□□□□□ -0.17
CPSF7-223ENST00000544669 CCDC50Q8IVM0 306 aa13.99□□□□□ -0.17
CPSF7-223ENST00000544669 CACNA2D3Q8IZS8 1091 aa13.99□□□□□ -0.17
CPSF7-223ENST00000544669 GPD1LQ8N335 351 aa13.99□□□□□ -0.17
CPSF7-223ENST00000544669 TMEM161BQ8NDZ6 487 aa13.99□□□□□ -0.17
CPSF7-223ENST00000544669 ALG3Q92685 438 aa13.99□□□□□ -0.17
CPSF7-223ENST00000544669 ZNF653Q96CK0 615 aa13.99□□□□□ -0.17
CPSF7-223ENST00000544669 CYFIP2Q96F07 1278 aa13.99□□□□□ -0.17
CPSF7-223ENST00000544669 VCPIP1Q96JH7 1222 aa13.99□□□□□ -0.17
CPSF7-223ENST00000544669 CABS1Q96KC9 395 aa13.99□□□□□ -0.17
CPSF7-223ENST00000544669 RMDN3Q96TC7 470 aa13.99□□□□□ -0.17
CPSF7-223ENST00000544669 NUP85Q9BW27 656 aa13.99□□□□□ -0.17
CPSF7-223ENST00000544669 NSRP1Q9H0G5 558 aaKnown RBP13.99□□□□□ -0.17
CPSF7-223ENST00000544669 BCAS3Q9H6U6 928 aa13.99□□□□□ -0.17
CPSF7-223ENST00000544669 AS3MTQ9HBK9 375 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms