RNA–Protein interactions for RNA: ENST00000543789.6

CDKN3-207, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-207ENST00000543789 LYPLA2O95372 231 aa25.14■■□□□ 1.62
CDKN3-207ENST00000543789 C1RP00736 705 aa25.14■■□□□ 1.62
CDKN3-207ENST00000543789 ARL2P36404 184 aa25.14■■□□□ 1.62
CDKN3-207ENST00000543789 SMG7Q92540 1137 aaKnown RBP25.14■■□□□ 1.62
CDKN3-207ENST00000543789 WASF1Q92558 559 aa25.14■■□□□ 1.62
CDKN3-207ENST00000543789 NFKBIZQ9BYH8 718 aa25.14■■□□□ 1.62
CDKN3-207ENST00000543789 PLEKHA4Q9H4M7 779 aa25.14■■□□□ 1.62
CDKN3-207ENST00000543789 PTPRZ1P23471 2315 aaPredicted RBP25.14■■□□□ 1.61
CDKN3-207ENST00000543789 CLUHO75153 1309 aa25.13■■□□□ 1.61
CDKN3-207ENST00000543789 CFAP54Q96N23 3096 aa25.13■■□□□ 1.61
CDKN3-207ENST00000543789 FAM205CA6NFA0 338 aa25.13■■□□□ 1.61
CDKN3-207ENST00000543789 NARSO43776 548 aaKnown RBP25.13■■□□□ 1.61
CDKN3-207ENST00000543789 SPATA31D3P0C874 917 aa25.13■■□□□ 1.61
CDKN3-207ENST00000543789 ARF4P18085 180 aaPredicted RBP25.13■■□□□ 1.61
CDKN3-207ENST00000543789 KRT2P35908 639 aa25.13■■□□□ 1.61
CDKN3-207ENST00000543789 NR5A1Q13285 461 aa25.13■■□□□ 1.61
CDKN3-207ENST00000543789 CAPSQ13938 189 aa25.13■■□□□ 1.61
CDKN3-207ENST00000543789 AMHR2Q16671 573 aa25.13■■□□□ 1.61
CDKN3-207ENST00000543789 SPATA31D4Q6ZUB0 917 aa25.13■■□□□ 1.61
CDKN3-207ENST00000543789 PALB2Q86YC2 1186 aa25.13■■□□□ 1.61
CDKN3-207ENST00000543789 CCDC105Q8IYK2 499 aa25.13■■□□□ 1.61
CDKN3-207ENST00000543789 RSAD2Q8WXG1 361 aa25.13■■□□□ 1.61
CDKN3-207ENST00000543789 NXF3Q9H4D5 531 aaKnown RBP25.13■■□□□ 1.61
CDKN3-207ENST00000543789 BRMS1Q9HCU9 246 aa25.13■■□□□ 1.61
CDKN3-207ENST00000543789 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP25.13■■□□□ 1.61
CDKN3-207ENST00000543789 EPS15L1Q9UBC2 864 aa25.13■■□□□ 1.61
CDKN3-207ENST00000543789 WNT16Q9UBV4 365 aa25.13■■□□□ 1.61
CDKN3-207ENST00000543789 CTDNEP1O95476 244 aa25.12■■□□□ 1.61
CDKN3-207ENST00000543789 AKAP5P24588 427 aa25.12■■□□□ 1.61
CDKN3-207ENST00000543789 USP41Q3LFD5 358 aa25.12■■□□□ 1.61
CDKN3-207ENST00000543789 GPR65Q8IYL9 337 aa25.12■■□□□ 1.61
CDKN3-207ENST00000543789 DTWD2Q8NBA8 298 aa25.12■■□□□ 1.61
CDKN3-207ENST00000543789 GSTCDQ8NEC7 633 aa25.12■■□□□ 1.61
CDKN3-207ENST00000543789 NXPE3Q969Y0 559 aa25.12■■□□□ 1.61
CDKN3-207ENST00000543789 ZNF707Q96C28 371 aaPredicted RBP25.12■■□□□ 1.61
CDKN3-207ENST00000543789 MYADMQ96S97 322 aa25.12■■□□□ 1.61
CDKN3-207ENST00000543789 GPR62Q9BZJ7 368 aa25.12■■□□□ 1.61
CDKN3-207ENST00000543789 NT5C3AQ9H0P0 336 aa25.12■■□□□ 1.61
CDKN3-207ENST00000543789 PIDD1Q9HB75 910 aa25.12■■□□□ 1.61
CDKN3-207ENST00000543789 STK25O00506 426 aa25.11■■□□□ 1.61
CDKN3-207ENST00000543789 PAPLNO95428 1278 aa25.11■■□□□ 1.61
CDKN3-207ENST00000543789 CFHP08603 1231 aa25.11■■□□□ 1.61
CDKN3-207ENST00000543789 GLRA2P23416 452 aa25.11■■□□□ 1.61
CDKN3-207ENST00000543789 CALCRLQ16602 461 aa25.11■■□□□ 1.61
CDKN3-207ENST00000543789 FUT10Q6P4F1 479 aa25.11■■□□□ 1.61
CDKN3-207ENST00000543789 SLC44A3Q8N4M1 653 aa25.11■■□□□ 1.61
CDKN3-207ENST00000543789 TNFRSF25Q93038 417 aa25.11■■□□□ 1.61
CDKN3-207ENST00000543789 B3GALT6Q96L58 329 aa25.11■■□□□ 1.61
CDKN3-207ENST00000543789 CCDC43Q96MW1 224 aaKnown RBP25.11■■□□□ 1.61
CDKN3-207ENST00000543789 FNIP2Q9P278 1114 aa25.11■■□□□ 1.61
CDKN3-207ENST00000543789 A0A1B0GUA9 196 aa25.1■■□□□ 1.61
CDKN3-207ENST00000543789 B4GALT5O43286 388 aa25.1■■□□□ 1.61
CDKN3-207ENST00000543789 TGM5O43548 720 aa25.1■■□□□ 1.61
CDKN3-207ENST00000543789 RARRES1P49788 294 aa25.1■■□□□ 1.61
CDKN3-207ENST00000543789 ANGPT1Q15389 498 aa25.1■■□□□ 1.61
CDKN3-207ENST00000543789 SLC27A1Q6PCB7 646 aa25.1■■□□□ 1.61
CDKN3-207ENST00000543789 RIN2Q8WYP3 895 aaPredicted RBP25.1■■□□□ 1.61
CDKN3-207ENST00000543789 TTC12Q9H892 705 aaPredicted RBP25.1■■□□□ 1.61
CDKN3-207ENST00000543789 ZDHHC7Q9NXF8 308 aa25.1■■□□□ 1.61
CDKN3-207ENST00000543789 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP25.1■■□□□ 1.61
CDKN3-207ENST00000543789 PARP2Q9UGN5 583 aa25.1■■□□□ 1.61
CDKN3-207ENST00000543789 ADAM28Q9UKQ2 775 aa25.1■■□□□ 1.61
CDKN3-207ENST00000543789 TADA2AO75478 443 aa25.09■■□□□ 1.61
CDKN3-207ENST00000543789 NPTXRO95502 500 aa25.09■■□□□ 1.61
CDKN3-207ENST00000543789 XRCC6P12956 609 aaKnown RBP eCLIP25.09■■□□□ 1.61
CDKN3-207ENST00000543789 FDPSP14324 419 aaKnown RBP25.09■■□□□ 1.61
CDKN3-207ENST00000543789 GRIK3Q13003 919 aa25.09■■□□□ 1.61
CDKN3-207ENST00000543789 LILRA6Q6PI73 481 aa25.09■■□□□ 1.61
CDKN3-207ENST00000543789 CDR2LQ86X02 465 aaPredicted RBP25.09■■□□□ 1.61
CDKN3-207ENST00000543789 PIGOQ8TEQ8 1089 aa25.09■■□□□ 1.61
CDKN3-207ENST00000543789 PRKD2Q9BZL6 878 aa25.09■■□□□ 1.61
CDKN3-207ENST00000543789 POLR3FQ9H1D9 316 aaPredicted RBP25.09■■□□□ 1.61
CDKN3-207ENST00000543789 KLK14Q9P0G3 267 aa25.09■■□□□ 1.61
CDKN3-207ENST00000543789 KRBA1A5PL33 1030 aa25.08■■□□□ 1.61
CDKN3-207ENST00000543789 TXKP42681 527 aa25.08■■□□□ 1.61
CDKN3-207ENST00000543789 CREMQ03060 361 aa25.08■■□□□ 1.61
CDKN3-207ENST00000543789 ANKRD1Q15327 319 aa25.08■■□□□ 1.61
CDKN3-207ENST00000543789 GLYCTKQ8IVS8 523 aa25.08■■□□□ 1.61
CDKN3-207ENST00000543789 RABGGTAQ92696 567 aa25.08■■□□□ 1.61
CDKN3-207ENST00000543789 PLXNA3P51805 1871 aa25.07■■□□□ 1.6
CDKN3-207ENST00000543789 A0A087WWV3 80 aa25.07■■□□□ 1.6
CDKN3-207ENST00000543789 SRFP11831 508 aa25.07■■□□□ 1.6
CDKN3-207ENST00000543789 LAMP2P13473 410 aa25.07■■□□□ 1.6
CDKN3-207ENST00000543789 RFX1P22670 979 aa25.07■■□□□ 1.6
CDKN3-207ENST00000543789 FOXK2Q01167 660 aa25.07■■□□□ 1.6
CDKN3-207ENST00000543789 ADSSL1Q8N142 457 aa25.07■■□□□ 1.6
CDKN3-207ENST00000543789 CA14Q9ULX7 337 aa25.07■■□□□ 1.6
CDKN3-207ENST00000543789 ZMYM2Q9UBW7 1377 aa25.06■■□□□ 1.6
CDKN3-207ENST00000543789 NEMFO60524 1076 aa25.06■■□□□ 1.6
CDKN3-207ENST00000543789 RPL17P18621 184 aaKnown RBP25.06■■□□□ 1.6
CDKN3-207ENST00000543789 HSP90AA2PQ14568 343 aaPredicted RBP25.06■■□□□ 1.6
CDKN3-207ENST00000543789 MAEAQ7L5Y9 396 aa25.06■■□□□ 1.6
CDKN3-207ENST00000543789 NECAB1Q8N987 351 aa25.06■■□□□ 1.6
CDKN3-207ENST00000543789 MTMR9Q96QG7 549 aa25.06■■□□□ 1.6
CDKN3-207ENST00000543789 DMDP11532 3685 aa25.06■■□□□ 1.6
CDKN3-207ENST00000543789 DENND4AQ7Z401 1863 aa25.05■■□□□ 1.6
CDKN3-207ENST00000543789 LRRIQ4A6NIV6 560 aa25.05■■□□□ 1.6
CDKN3-207ENST00000543789 BTBD18B2RXH4 712 aa25.05■■□□□ 1.6
CDKN3-207ENST00000543789 USO1O60763 962 aaKnown RBP25.05■■□□□ 1.6
CDKN3-207ENST00000543789 ZMYND10O75800 440 aa25.05■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms