RNA–Protein interactions for RNA: ENST00000543374.1

MRPL48-212, Transcript of mitochondrial ribosomal protein L48, humanhuman

TSL 3

Gene MRPL48, Length 463 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL48-212ENST00000543374 H2AFY2Q9P0M6 372 aaPredicted RBP6.29□□□□□ -1.4
MRPL48-212ENST00000543374 DKK2Q9UBU2 259 aa6.29□□□□□ -1.4
MRPL48-212ENST00000543374 PIPSLA2A3N6 862 aa6.28□□□□□ -1.4
MRPL48-212ENST00000543374 TBKBP1A7MCY6 615 aa6.28□□□□□ -1.4
MRPL48-212ENST00000543374 LTA4HP09960 611 aaKnown RBP6.28□□□□□ -1.4
MRPL48-212ENST00000543374 ZSCAN20P17040 1043 aaPredicted RBP6.28□□□□□ -1.4
MRPL48-212ENST00000543374 ELLP55199 621 aaPredicted RBP6.28□□□□□ -1.4
MRPL48-212ENST00000543374 MGAT5Q09328 741 aa6.28□□□□□ -1.4
MRPL48-212ENST00000543374 UBE3CQ15386 1083 aa6.28□□□□□ -1.4
MRPL48-212ENST00000543374 ZKSCAN2Q63HK3 967 aa6.28□□□□□ -1.4
MRPL48-212ENST00000543374 XYLT1Q86Y38 959 aa6.28□□□□□ -1.4
MRPL48-212ENST00000543374 NTN5Q8WTR8 489 aaPredicted RBP6.28□□□□□ -1.4
MRPL48-212ENST00000543374 CHTF18Q8WVB6 975 aa6.28□□□□□ -1.4
MRPL48-212ENST00000543374 LINC00476Q8WZB0 136 aa6.28□□□□□ -1.4
MRPL48-212ENST00000543374 FDXACB1Q9BRP7 624 aaPredicted RBP6.28□□□□□ -1.4
MRPL48-212ENST00000543374 THG1LQ9NWX6 298 aaKnown RBP6.28□□□□□ -1.4
MRPL48-212ENST00000543374 POGKQ9P215 609 aa6.28□□□□□ -1.4
MRPL48-212ENST00000543374 EPN1Q9Y6I3 576 aaPredicted RBP6.28□□□□□ -1.4
MRPL48-212ENST00000543374 LEFTY2O00292 366 aa6.27□□□□□ -1.41
MRPL48-212ENST00000543374 CDK4P11802 303 aa6.27□□□□□ -1.41
MRPL48-212ENST00000543374 DDX6P26196 483 aaKnown RBP eCLIP6.27□□□□□ -1.41
MRPL48-212ENST00000543374 SCNN1BP51168 640 aa6.27□□□□□ -1.41
MRPL48-212ENST00000543374 RNASE9P60153 205 aaKnown RBP6.27□□□□□ -1.41
MRPL48-212ENST00000543374 FRMD7Q6ZUT3 714 aa6.27□□□□□ -1.41
MRPL48-212ENST00000543374 RD3Q7Z3Z2 195 aa6.27□□□□□ -1.41
MRPL48-212ENST00000543374 MSL3Q8N5Y2 521 aaKnown RBP6.27□□□□□ -1.41
MRPL48-212ENST00000543374 ZFP28Q8NHY6 868 aa6.27□□□□□ -1.41
MRPL48-212ENST00000543374 PRSS38A1L453 326 aa6.26□□□□□ -1.41
MRPL48-212ENST00000543374 KPNA6O60684 536 aa6.26□□□□□ -1.41
MRPL48-212ENST00000543374 SEC24CP53992 1094 aa6.26□□□□□ -1.41
MRPL48-212ENST00000543374 BMS1Q14692 1282 aaKnown RBP6.26□□□□□ -1.41
MRPL48-212ENST00000543374 PRR16Q569H4 304 aa6.26□□□□□ -1.41
MRPL48-212ENST00000543374 ZBTB41Q5SVQ8 909 aa6.26□□□□□ -1.41
MRPL48-212ENST00000543374 C11orf74Q86VG3 221 aa6.26□□□□□ -1.41
MRPL48-212ENST00000543374 AHI1Q8N157 1196 aa6.26□□□□□ -1.41
MRPL48-212ENST00000543374 NXPE1Q8N323 547 aa6.26□□□□□ -1.41
MRPL48-212ENST00000543374 CPEB3Q8NE35 698 aaKnown RBP6.26□□□□□ -1.41
MRPL48-212ENST00000543374 OR10H5Q8NGA6 315 aa6.26□□□□□ -1.41
MRPL48-212ENST00000543374 OR14C36Q8NHC7 312 aa6.26□□□□□ -1.41
MRPL48-212ENST00000543374 PRSS50Q9UI38 385 aa6.26□□□□□ -1.41
MRPL48-212ENST00000543374 TGM5O43548 720 aa6.25□□□□□ -1.41
MRPL48-212ENST00000543374 RAB11FIP3O75154 756 aa6.25□□□□□ -1.41
MRPL48-212ENST00000543374 CLK3P49761 638 aaKnown RBP6.25□□□□□ -1.41
MRPL48-212ENST00000543374 PPARAQ07869 468 aa6.25□□□□□ -1.41
MRPL48-212ENST00000543374 BMT2Q1RMZ1 405 aa6.25□□□□□ -1.41
MRPL48-212ENST00000543374 HDGFL2Q7Z4V5 671 aaPredicted RBP6.25□□□□□ -1.41
MRPL48-212ENST00000543374 LRRTM3Q86VH5 581 aa6.25□□□□□ -1.41
MRPL48-212ENST00000543374 PPM1KQ8N3J5 372 aa6.25□□□□□ -1.41
MRPL48-212ENST00000543374 CAGE1Q8TC20 777 aa6.25□□□□□ -1.41
MRPL48-212ENST00000543374 TFAP2CQ92754 450 aa6.25□□□□□ -1.41
MRPL48-212ENST00000543374 DNAJC2Q99543 621 aaKnown RBP6.25□□□□□ -1.41
MRPL48-212ENST00000543374 RNF181Q9P0P0 153 aa6.25□□□□□ -1.41
MRPL48-212ENST00000543374 FPGT-TNNI3KV9GXZ4 949 aa6.25□□□□□ -1.41
MRPL48-212ENST00000543374 PRAMEF4O60810 478 aa6.24□□□□□ -1.41
MRPL48-212ENST00000543374 ESRRBO95718 433 aa6.24□□□□□ -1.41
MRPL48-212ENST00000543374 CXCR5P32302 372 aa6.24□□□□□ -1.41
MRPL48-212ENST00000543374 PTTG1IPP53801 180 aa6.24□□□□□ -1.41
MRPL48-212ENST00000543374 TERF2Q15554 542 aa6.24□□□□□ -1.41
MRPL48-212ENST00000543374 COLEC12Q5KU26 742 aa6.24□□□□□ -1.41
MRPL48-212ENST00000543374 FBXO42Q6P3S6 717 aa6.24□□□□□ -1.41
MRPL48-212ENST00000543374 SMC1BQ8NDV3 1235 aa6.24□□□□□ -1.41
MRPL48-212ENST00000543374 SNX33Q8WV41 574 aa6.24□□□□□ -1.41
MRPL48-212ENST00000543374 MTFR1LQ9H019 292 aa6.24□□□□□ -1.41
MRPL48-212ENST00000543374 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.24□□□□□ -1.41
MRPL48-212ENST00000543374 SPATA31A6Q5VVP1 1343 aa6.24□□□□□ -1.41
MRPL48-212ENST00000543374 ZNF891A8MT65 544 aaPredicted RBP6.23□□□□□ -1.41
MRPL48-212ENST00000543374 ITGA10O75578 1167 aa6.23□□□□□ -1.41
MRPL48-212ENST00000543374 CDK11BP21127 795 aaKnown RBP6.23□□□□□ -1.41
MRPL48-212ENST00000543374 SPDYE7PQ495Y7 208 aa6.23□□□□□ -1.41
MRPL48-212ENST00000543374 PDCD4Q53EL6 469 aaKnown RBP6.23□□□□□ -1.41
MRPL48-212ENST00000543374 GJC2Q5T442 439 aaPredicted RBP6.23□□□□□ -1.41
MRPL48-212ENST00000543374 HOMER1Q86YM7 354 aa6.23□□□□□ -1.41
MRPL48-212ENST00000543374 SYT12Q8IV01 421 aa6.23□□□□□ -1.41
MRPL48-212ENST00000543374 ATP11BQ9Y2G3 1177 aa6.23□□□□□ -1.41
MRPL48-212ENST00000543374 PHF2O75151 1096 aa6.22□□□□□ -1.41
MRPL48-212ENST00000543374 FOSP01100 380 aaPredicted RBP6.22□□□□□ -1.41
MRPL48-212ENST00000543374 TYRP1P17643 537 aa6.22□□□□□ -1.41
MRPL48-212ENST00000543374 CRHR1P34998 444 aa6.22□□□□□ -1.41
MRPL48-212ENST00000543374 LSSP48449 732 aa6.22□□□□□ -1.41
MRPL48-212ENST00000543374 MPP3Q13368 585 aa6.22□□□□□ -1.41
MRPL48-212ENST00000543374 FAM102AQ5T9C2 384 aaPredicted RBP6.22□□□□□ -1.41
MRPL48-212ENST00000543374 BTNL9Q6UXG8 535 aa6.22□□□□□ -1.41
MRPL48-212ENST00000543374 OR2W6PQ8NHA6 318 aa6.22□□□□□ -1.41
MRPL48-212ENST00000543374 NINJ1Q92982 152 aa6.22□□□□□ -1.41
MRPL48-212ENST00000543374 ZSWIM4Q9H7M6 989 aa6.22□□□□□ -1.41
MRPL48-212ENST00000543374 GPRC5DQ9NZD1 345 aa6.22□□□□□ -1.41
MRPL48-212ENST00000543374 EVLQ9UI08 416 aaPredicted RBP6.22□□□□□ -1.41
MRPL48-212ENST00000543374 TMPRSS11EQ9UL52 423 aa6.22□□□□□ -1.41
MRPL48-212ENST00000543374 ZMYM3Q14202 1370 aa6.21□□□□□ -1.41
MRPL48-212ENST00000543374 PJA2O43164 708 aa6.21□□□□□ -1.42
MRPL48-212ENST00000543374 C1RP00736 705 aa6.21□□□□□ -1.42
MRPL48-212ENST00000543374 EGR2P11161 476 aaPredicted RBP6.21□□□□□ -1.42
MRPL48-212ENST00000543374 ZNF37AP17032 561 aaPredicted RBP6.21□□□□□ -1.42
MRPL48-212ENST00000543374 MANFP55145 182 aaKnown RBP6.21□□□□□ -1.42
MRPL48-212ENST00000543374 FOXI1Q12951 378 aa6.21□□□□□ -1.42
MRPL48-212ENST00000543374 RESTQ13127 1097 aa6.21□□□□□ -1.42
MRPL48-212ENST00000543374 SIMC1Q8NDZ2 872 aa6.21□□□□□ -1.42
MRPL48-212ENST00000543374 NAF1Q96HR8 494 aaKnown RBP6.21□□□□□ -1.42
MRPL48-212ENST00000543374 ANO3Q9BYT9 981 aa6.21□□□□□ -1.42
MRPL48-212ENST00000543374 REXO4Q9GZR2 422 aaKnown RBP6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms