RNA–Protein interactions for RNA: ENST00000542238.5

RTN3-211, Transcript of reticulon 3, humanhuman

TSL 3

Gene RTN3, Length 735 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-211ENST00000542238 GVINP1Q7Z2Y8 2422 aa17.16■□□□□ 0.34
RTN3-211ENST00000542238 ZBTB39O15060 712 aa17.16■□□□□ 0.34
RTN3-211ENST00000542238 NARSO43776 548 aaKnown RBP17.16■□□□□ 0.34
RTN3-211ENST00000542238 N4BP1O75113 896 aaKnown RBP17.16■□□□□ 0.34
RTN3-211ENST00000542238 RFPL2O75678 378 aa17.16■□□□□ 0.34
RTN3-211ENST00000542238 SPATA31D3P0C874 917 aa17.16■□□□□ 0.34
RTN3-211ENST00000542238 MYBP10242 640 aa17.16■□□□□ 0.34
RTN3-211ENST00000542238 POU5F1BQ06416 359 aa17.16■□□□□ 0.34
RTN3-211ENST00000542238 USP41Q3LFD5 358 aa17.16■□□□□ 0.34
RTN3-211ENST00000542238 SPATA31D4Q6ZUB0 917 aa17.16■□□□□ 0.34
RTN3-211ENST00000542238 PALB2Q86YC2 1186 aa17.16■□□□□ 0.34
RTN3-211ENST00000542238 POTEDQ86YR6 584 aa17.16■□□□□ 0.34
RTN3-211ENST00000542238 SLC44A3Q8N4M1 653 aa17.16■□□□□ 0.34
RTN3-211ENST00000542238 RSAD2Q8WXG1 361 aa17.16■□□□□ 0.34
RTN3-211ENST00000542238 ZFP42Q96MM3 310 aa17.16■□□□□ 0.34
RTN3-211ENST00000542238 CCDC43Q96MW1 224 aaKnown RBP17.16■□□□□ 0.34
RTN3-211ENST00000542238 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.16■□□□□ 0.34
RTN3-211ENST00000542238 WDR87Q6ZQQ6 2873 aa17.15■□□□□ 0.34
RTN3-211ENST00000542238 EFEMP2O95967 443 aa17.15■□□□□ 0.34
RTN3-211ENST00000542238 CREMQ03060 361 aa17.15■□□□□ 0.34
RTN3-211ENST00000542238 IFNLR1Q8IU57 520 aaPredicted RBP17.15■□□□□ 0.34
RTN3-211ENST00000542238 GPR65Q8IYL9 337 aa17.15■□□□□ 0.34
RTN3-211ENST00000542238 NT5C3AQ9H0P0 336 aa17.15■□□□□ 0.34
RTN3-211ENST00000542238 XPNPEP1Q9NQW7 623 aa17.15■□□□□ 0.34
RTN3-211ENST00000542238 CHST7Q9NS84 486 aa17.15■□□□□ 0.34
RTN3-211ENST00000542238 MIOSQ9NXC5 875 aa17.15■□□□□ 0.34
RTN3-211ENST00000542238 ZDHHC7Q9NXF8 308 aa17.15■□□□□ 0.34
RTN3-211ENST00000542238 STK36Q9NRP7 1315 aa17.15■□□□□ 0.34
RTN3-211ENST00000542238 VPS13AQ96RL7 3174 aa17.15■□□□□ 0.34
RTN3-211ENST00000542238 DGAT1O75907 488 aa17.14■□□□□ 0.33
RTN3-211ENST00000542238 SLITRK3O94933 977 aa17.14■□□□□ 0.33
RTN3-211ENST00000542238 SRFP11831 508 aa17.14■□□□□ 0.33
RTN3-211ENST00000542238 ARF4P18085 180 aaPredicted RBP17.14■□□□□ 0.33
RTN3-211ENST00000542238 MBTD1Q05BQ5 628 aa17.14■□□□□ 0.33
RTN3-211ENST00000542238 SPIRE1Q08AE8 756 aa17.14■□□□□ 0.33
RTN3-211ENST00000542238 SCRN1Q12765 414 aa17.14■□□□□ 0.33
RTN3-211ENST00000542238 FUT10Q6P4F1 479 aa17.14■□□□□ 0.33
RTN3-211ENST00000542238 KCNG4Q8TDN1 519 aa17.14■□□□□ 0.33
RTN3-211ENST00000542238 OXER1Q8TDS5 423 aa17.14■□□□□ 0.33
RTN3-211ENST00000542238 WASF1Q92558 559 aa17.14■□□□□ 0.33
RTN3-211ENST00000542238 ZNF707Q96C28 371 aaPredicted RBP17.14■□□□□ 0.33
RTN3-211ENST00000542238 MYADMQ96S97 322 aa17.14■□□□□ 0.33
RTN3-211ENST00000542238 EIF2AK1Q9BQI3 630 aaKnown RBP17.14■□□□□ 0.33
RTN3-211ENST00000542238 SEMA4AQ9H3S1 761 aa17.14■□□□□ 0.33
RTN3-211ENST00000542238 ANKEF1Q9NU02 776 aa17.14■□□□□ 0.33
RTN3-211ENST00000542238 FNIP2Q9P278 1114 aa17.14■□□□□ 0.33
RTN3-211ENST00000542238 ADAM28Q9UKQ2 775 aa17.14■□□□□ 0.33
RTN3-211ENST00000542238 CA14Q9ULX7 337 aa17.14■□□□□ 0.33
RTN3-211ENST00000542238 PCDHA12Q9UN75 941 aa17.14■□□□□ 0.33
RTN3-211ENST00000542238 ZNF292O60281 2723 aa17.13■□□□□ 0.33
RTN3-211ENST00000542238 DMDP11532 3685 aa17.13■□□□□ 0.33
RTN3-211ENST00000542238 KRBA1A5PL33 1030 aa17.13■□□□□ 0.33
RTN3-211ENST00000542238 F8W810 466 aa17.13■□□□□ 0.33
RTN3-211ENST00000542238 TGM5O43548 720 aa17.13■□□□□ 0.33
RTN3-211ENST00000542238 TADA2AO75478 443 aa17.13■□□□□ 0.33
RTN3-211ENST00000542238 LYPLA2O95372 231 aa17.13■□□□□ 0.33
RTN3-211ENST00000542238 LAMP2P13473 410 aa17.13■□□□□ 0.33
RTN3-211ENST00000542238 AKAP5P24588 427 aa17.13■□□□□ 0.33
RTN3-211ENST00000542238 GRIK3Q13003 919 aa17.13■□□□□ 0.33
RTN3-211ENST00000542238 CAPSQ13938 189 aa17.13■□□□□ 0.33
RTN3-211ENST00000542238 SLC27A1Q6PCB7 646 aa17.13■□□□□ 0.33
RTN3-211ENST00000542238 GLYCTKQ8IVS8 523 aa17.13■□□□□ 0.33
RTN3-211ENST00000542238 RIN2Q8WYP3 895 aaPredicted RBP17.13■□□□□ 0.33
RTN3-211ENST00000542238 B3GALT6Q96L58 329 aa17.13■□□□□ 0.33
RTN3-211ENST00000542238 NFKBIZQ9BYH8 718 aa17.13■□□□□ 0.33
RTN3-211ENST00000542238 GPR62Q9BZJ7 368 aa17.13■□□□□ 0.33
RTN3-211ENST00000542238 PRKD2Q9BZL6 878 aa17.13■□□□□ 0.33
RTN3-211ENST00000542238 NXF3Q9H4D5 531 aaKnown RBP17.13■□□□□ 0.33
RTN3-211ENST00000542238 TBC1D17Q9HA65 648 aa17.13■□□□□ 0.33
RTN3-211ENST00000542238 BRMS1Q9HCU9 246 aa17.13■□□□□ 0.33
RTN3-211ENST00000542238 PARP2Q9UGN5 583 aa17.13■□□□□ 0.33
RTN3-211ENST00000542238 PAPLNO95428 1278 aa17.12■□□□□ 0.33
RTN3-211ENST00000542238 NPTXRO95502 500 aa17.12■□□□□ 0.33
RTN3-211ENST00000542238 KRT2P35908 639 aa17.12■□□□□ 0.33
RTN3-211ENST00000542238 ARL2P36404 184 aa17.12■□□□□ 0.33
RTN3-211ENST00000542238 ID4P47928 161 aa17.12■□□□□ 0.33
RTN3-211ENST00000542238 AMHR2Q16671 573 aa17.12■□□□□ 0.33
RTN3-211ENST00000542238 GET4Q7L5D6 327 aaPredicted RBP17.12■□□□□ 0.33
RTN3-211ENST00000542238 ERMP1Q7Z2K6 904 aa17.12■□□□□ 0.33
RTN3-211ENST00000542238 ASAP3Q8TDY4 903 aa17.12■□□□□ 0.33
RTN3-211ENST00000542238 HSD17B14Q9BPX1 270 aa17.12■□□□□ 0.33
RTN3-211ENST00000542238 GJB4Q9NTQ9 266 aa17.12■□□□□ 0.33
RTN3-211ENST00000542238 ZMYM2Q9UBW7 1377 aa17.12■□□□□ 0.33
RTN3-211ENST00000542238 EP300Q09472 2414 aaPredicted RBP17.11■□□□□ 0.33
RTN3-211ENST00000542238 A0A1B0GUA9 196 aa17.11■□□□□ 0.33
RTN3-211ENST00000542238 PFKFB2O60825 505 aa17.11■□□□□ 0.33
RTN3-211ENST00000542238 GLRA2P23416 452 aa17.11■□□□□ 0.33
RTN3-211ENST00000542238 CALCRLQ16602 461 aa17.11■□□□□ 0.33
RTN3-211ENST00000542238 PHLDB3Q6NSJ2 640 aa17.11■□□□□ 0.33
RTN3-211ENST00000542238 LILRA6Q6PI73 481 aa17.11■□□□□ 0.33
RTN3-211ENST00000542238 GSTCDQ8NEC7 633 aa17.11■□□□□ 0.33
RTN3-211ENST00000542238 GPR152Q8TDT2 470 aa17.11■□□□□ 0.33
RTN3-211ENST00000542238 POLR3FQ9H1D9 316 aaPredicted RBP17.11■□□□□ 0.33
RTN3-211ENST00000542238 TTC12Q9H892 705 aaPredicted RBP17.11■□□□□ 0.33
RTN3-211ENST00000542238 KLK14Q9P0G3 267 aa17.11■□□□□ 0.33
RTN3-211ENST00000542238 ORC3Q9UBD5 711 aaPredicted RBP17.11■□□□□ 0.33
RTN3-211ENST00000542238 ZFP37Q9Y6Q3 630 aaPredicted RBP17.11■□□□□ 0.33
RTN3-211ENST00000542238 SF3B1O75533 1304 aaKnown RBP eCLIP17.11■□□□□ 0.332e-10■■■■■ 69.9
RTN3-211ENST00000542238 B4GALT5O43286 388 aa17.1■□□□□ 0.33
RTN3-211ENST00000542238 ZMYND10O75800 440 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms