RNA–Protein interactions for RNA: ENST00000542179.1

LDHA-220, Transcript of lactate dehydrogenase A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDHA, Length 1,288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-220ENST00000542179 MRPL4Q9BYD3 311 aaKnown RBP10.08□□□□□ -0.8
LDHA-220ENST00000542179 IRX2Q9BZI1 471 aaPredicted RBP10.08□□□□□ -0.8
LDHA-220ENST00000542179 IFT122Q9HBG6 1241 aa10.08□□□□□ -0.8
LDHA-220ENST00000542179 C17orf102A2RUQ5 167 aa10.07□□□□□ -0.8
LDHA-220ENST00000542179 GTPBP10A4D1E9 387 aaKnown RBP10.07□□□□□ -0.8
LDHA-220ENST00000542179 EXTL3O43909 919 aa10.07□□□□□ -0.8
LDHA-220ENST00000542179 CABYRO75952 493 aa10.07□□□□□ -0.8
LDHA-220ENST00000542179 LDHAP00338 332 aaKnown RBP10.07□□□□□ -0.8
LDHA-220ENST00000542179 PGK1P00558 417 aa10.07□□□□□ -0.8
LDHA-220ENST00000542179 AFPP02771 609 aaKnown RBP10.07□□□□□ -0.8
LDHA-220ENST00000542179 INHAP05111 366 aa10.07□□□□□ -0.8
LDHA-220ENST00000542179 SFPQP23246 707 aaKnown RBP eCLIP10.07□□□□□ -0.8
LDHA-220ENST00000542179 GRK4P32298 578 aa10.07□□□□□ -0.8
LDHA-220ENST00000542179 PHKA2P46019 1235 aa10.07□□□□□ -0.8
LDHA-220ENST00000542179 GPC3P51654 580 aa10.07□□□□□ -0.8
LDHA-220ENST00000542179 MBTD1Q05BQ5 628 aa10.07□□□□□ -0.8
LDHA-220ENST00000542179 KCNH2Q12809 1159 aa10.07□□□□□ -0.8
LDHA-220ENST00000542179 PCBP1Q15365 356 aaKnown RBP eCLIP10.07□□□□□ -0.86e-20■□□□□ 9.8
LDHA-220ENST00000542179 TSHZ1Q6ZSZ6 1077 aa10.07□□□□□ -0.8
LDHA-220ENST00000542179 SRGAP1Q7Z6B7 1085 aa10.07□□□□□ -0.8
LDHA-220ENST00000542179 RNF180Q86T96 592 aa10.07□□□□□ -0.8
LDHA-220ENST00000542179 GPD1LQ8N335 351 aa10.07□□□□□ -0.8
LDHA-220ENST00000542179 NME8Q8N427 588 aa10.07□□□□□ -0.8
LDHA-220ENST00000542179 C7orf31Q8N865 590 aa10.07□□□□□ -0.8
LDHA-220ENST00000542179 CACTINQ8WUQ7 758 aaKnown RBP10.07□□□□□ -0.8
LDHA-220ENST00000542179 POMGNT1Q8WZA1 660 aa10.07□□□□□ -0.8
LDHA-220ENST00000542179 ZBTB10Q96DT7 871 aa10.07□□□□□ -0.8
LDHA-220ENST00000542179 CCDC51Q96ER9 411 aa10.07□□□□□ -0.8
LDHA-220ENST00000542179 BICD1Q96G01 975 aa10.07□□□□□ -0.8
LDHA-220ENST00000542179 PRIMPOLQ96LW4 560 aa10.07□□□□□ -0.8
LDHA-220ENST00000542179 MFSD14AQ96MC6 490 aa10.07□□□□□ -0.8
LDHA-220ENST00000542179 NLRP4Q96MN2 994 aa10.07□□□□□ -0.8
LDHA-220ENST00000542179 TARS2Q9BW92 718 aaKnown RBP10.07□□□□□ -0.8
LDHA-220ENST00000542179 EDEM3Q9BZQ6 932 aa10.07□□□□□ -0.8
LDHA-220ENST00000542179 HMX1Q9NP08 348 aaPredicted RBP10.07□□□□□ -0.8
LDHA-220ENST00000542179 PRMT7Q9NVM4 692 aaPredicted RBP10.07□□□□□ -0.8
LDHA-220ENST00000542179 HDAC6Q9UBN7 1215 aa10.07□□□□□ -0.8
LDHA-220ENST00000542179 SIK3Q9Y2K2 1263 aa10.07□□□□□ -0.8
LDHA-220ENST00000542179 A0A087WZ62 844 aa10.06□□□□□ -0.8
LDHA-220ENST00000542179 A0A0B4J269 797 aa10.06□□□□□ -0.8
LDHA-220ENST00000542179 A0A1W2PQJ5 194 aa10.06□□□□□ -0.8
LDHA-220ENST00000542179 AKR1B15C9JRZ8 316 aaPredicted RBP10.06□□□□□ -0.8
LDHA-220ENST00000542179 PES1O00541 588 aaKnown RBP10.06□□□□□ -0.8
LDHA-220ENST00000542179 PMM2O15305 246 aa10.06□□□□□ -0.8
LDHA-220ENST00000542179 P4HA2O15460 535 aa10.06□□□□□ -0.8
LDHA-220ENST00000542179 TOM1L1O75674 476 aa10.06□□□□□ -0.8
LDHA-220ENST00000542179 GYPCP04921 128 aa10.06□□□□□ -0.8
LDHA-220ENST00000542179 RPLP2P05387 115 aaKnown RBP10.06□□□□□ -0.8
LDHA-220ENST00000542179 PRKCBP05771 671 aa10.06□□□□□ -0.8
LDHA-220ENST00000542179 ASGR1P07306 291 aa10.06□□□□□ -0.8
LDHA-220ENST00000542179 GJB1P08034 283 aa10.06□□□□□ -0.8
LDHA-220ENST00000542179 CYP2C9P11712 490 aa10.06□□□□□ -0.8
LDHA-220ENST00000542179 KRT13P13646 458 aa10.06□□□□□ -0.8
LDHA-220ENST00000542179 PROZP22891 400 aa10.06□□□□□ -0.8
LDHA-220ENST00000542179 RBL2Q08999 1139 aa10.06□□□□□ -0.8
LDHA-220ENST00000542179 KCNMA1Q12791 1236 aa10.06□□□□□ -0.8
LDHA-220ENST00000542179 BFSP1Q12934 665 aa10.06□□□□□ -0.8
LDHA-220ENST00000542179 ARID5BQ14865 1188 aa10.06□□□□□ -0.8
LDHA-220ENST00000542179 SYCP1Q15431 976 aa10.06□□□□□ -0.8
LDHA-220ENST00000542179 KCNA10Q16322 511 aa10.06□□□□□ -0.8
LDHA-220ENST00000542179 SNRNP35Q16560 246 aaKnown RBP10.06□□□□□ -0.8
LDHA-220ENST00000542179 PTPN21Q16825 1174 aa10.06□□□□□ -0.8
LDHA-220ENST00000542179 TAF2Q6P1X5 1199 aa10.06□□□□□ -0.8
LDHA-220ENST00000542179 CXCL17Q6UXB2 119 aa10.06□□□□□ -0.8
LDHA-220ENST00000542179 USP37Q86T82 979 aa10.06□□□□□ -0.8
LDHA-220ENST00000542179 PPFIBP1Q86W92 1011 aa10.06□□□□□ -0.8
LDHA-220ENST00000542179 CNGA4Q8IV77 575 aa10.06□□□□□ -0.8
LDHA-220ENST00000542179 TC2NQ8N9U0 490 aa10.06□□□□□ -0.8
LDHA-220ENST00000542179 ACO2Q99798 780 aaKnown RBP10.06□□□□□ -0.8
LDHA-220ENST00000542179 FDXACB1Q9BRP7 624 aaPredicted RBP10.06□□□□□ -0.8
LDHA-220ENST00000542179 TSEN34Q9BSV6 310 aaKnown RBP10.06□□□□□ -0.8
LDHA-220ENST00000542179 TTYH3Q9C0H2 523 aa10.06□□□□□ -0.8
LDHA-220ENST00000542179 ADAMTS10Q9H324 1103 aa10.06□□□□□ -0.8
LDHA-220ENST00000542179 KCNF1Q9H3M0 494 aa10.06□□□□□ -0.8
LDHA-220ENST00000542179 TMX1Q9H3N1 280 aa10.06□□□□□ -0.8
LDHA-220ENST00000542179 PCIF1Q9H4Z3 704 aa10.06□□□□□ -0.8
LDHA-220ENST00000542179 PTPRHQ9HD43 1115 aa10.06□□□□□ -0.8
LDHA-220ENST00000542179 GTF2IRD1Q9UHL9 959 aa10.06□□□□□ -0.8
LDHA-220ENST00000542179 CAPN11Q9UMQ6 739 aa10.06□□□□□ -0.8
LDHA-220ENST00000542179 AKT3Q9Y243 479 aa10.06□□□□□ -0.8
LDHA-220ENST00000542179 ZKSCAN5Q9Y2L8 839 aa10.06□□□□□ -0.8
LDHA-220ENST00000542179 PTPN22Q9Y2R2 807 aa10.06□□□□□ -0.8
LDHA-220ENST00000542179 TRIM17Q9Y577 477 aa10.06□□□□□ -0.8
LDHA-220ENST00000542179 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.06□□□□□ -0.87e-16■■□□□ 12.4
LDHA-220ENST00000542179 SCN10AQ9Y5Y9 1956 aa10.06□□□□□ -0.8
LDHA-220ENST00000542179 KAT6AQ92794 2004 aa10.06□□□□□ -0.8
LDHA-220ENST00000542179 EVPLQ92817 2033 aa10.06□□□□□ -0.8
LDHA-220ENST00000542179 MOXD2PA6NHM9 499 aa10.05□□□□□ -0.8
LDHA-220ENST00000542179 ZNF233A6NK53 670 aa10.05□□□□□ -0.8
LDHA-220ENST00000542179 INO80B-WBP1J3KQ70 363 aa10.05□□□□□ -0.8
LDHA-220ENST00000542179 TULP1O00294 542 aaPredicted RBP10.05□□□□□ -0.8
LDHA-220ENST00000542179 ABLIM1O14639 778 aa10.05□□□□□ -0.8
LDHA-220ENST00000542179 CLDN3O15551 220 aa10.05□□□□□ -0.8
LDHA-220ENST00000542179 TREHO43280 583 aa10.05□□□□□ -0.8
LDHA-220ENST00000542179 STX10O60499 249 aa10.05□□□□□ -0.8
LDHA-220ENST00000542179 GPR32O75388 356 aa10.05□□□□□ -0.8
LDHA-220ENST00000542179 VTNP04004 478 aa10.05□□□□□ -0.8
LDHA-220ENST00000542179 EDN1P05305 212 aa10.05□□□□□ -0.8
LDHA-220ENST00000542179 TPM1P09493 284 aa10.05□□□□□ -0.8
LDHA-220ENST00000542179 IQCF3P0C7M6 154 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms