RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 ZC2HC1CQ53FD0 456 aaPredicted RBP10.7□□□□□ -0.7
YBX3-212ENST00000542002 RESP18Q5W5W9 173 aa10.7□□□□□ -0.7
YBX3-212ENST00000542002 CCDC73Q6ZRK6 1079 aa10.7□□□□□ -0.7
YBX3-212ENST00000542002 SV2BQ7L1I2 683 aa10.7□□□□□ -0.7
YBX3-212ENST00000542002 HAUS6Q7Z4H7 955 aa10.7□□□□□ -0.7
YBX3-212ENST00000542002 ADGRD2Q7Z7M1 963 aa10.7□□□□□ -0.7
YBX3-212ENST00000542002 ZBTB33Q86T24 672 aa10.7□□□□□ -0.7
YBX3-212ENST00000542002 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.7□□□□□ -0.7
YBX3-212ENST00000542002 COLGALT2Q8IYK4 626 aa10.7□□□□□ -0.7
YBX3-212ENST00000542002 THNSL1Q8IYQ7 743 aa10.7□□□□□ -0.7
YBX3-212ENST00000542002 CEP120Q8N960 986 aa10.7□□□□□ -0.7
YBX3-212ENST00000542002 KCNG4Q8TDN1 519 aa10.7□□□□□ -0.7
YBX3-212ENST00000542002 LEO1Q8WVC0 666 aaPredicted RBP10.7□□□□□ -0.7
YBX3-212ENST00000542002 RABGGTAQ92696 567 aa10.7□□□□□ -0.7
YBX3-212ENST00000542002 ZNF558Q96NG5 402 aa10.7□□□□□ -0.7
YBX3-212ENST00000542002 FGFBP2Q9BYJ0 223 aa10.7□□□□□ -0.7
YBX3-212ENST00000542002 TRIM6Q9C030 488 aaPredicted RBP10.7□□□□□ -0.7
YBX3-212ENST00000542002 GBP3Q9H0R5 595 aa10.7□□□□□ -0.7
YBX3-212ENST00000542002 IKZF4Q9H2S9 585 aa10.7□□□□□ -0.7
YBX3-212ENST00000542002 PARVGQ9HBI0 331 aa10.7□□□□□ -0.7
YBX3-212ENST00000542002 UBN1Q9NPG3 1134 aa10.7□□□□□ -0.7
YBX3-212ENST00000542002 AAASQ9NRG9 546 aa10.7□□□□□ -0.7
YBX3-212ENST00000542002 SPG21Q9NZD8 308 aa10.7□□□□□ -0.7
YBX3-212ENST00000542002 CACNG4Q9UBN1 327 aa10.7□□□□□ -0.7
YBX3-212ENST00000542002 STK17AQ9UEE5 414 aa10.7□□□□□ -0.7
YBX3-212ENST00000542002 PARP2Q9UGN5 583 aa10.7□□□□□ -0.7
YBX3-212ENST00000542002 CFAP45Q9UL16 551 aa10.7□□□□□ -0.7
YBX3-212ENST00000542002 GIT1Q9Y2X7 761 aa10.7□□□□□ -0.7
YBX3-212ENST00000542002 PRRC2BQ5JSZ5 2229 aaKnown RBP10.7□□□□□ -0.7
YBX3-212ENST00000542002 FNDC1Q4ZHG4 1894 aaPredicted RBP10.7□□□□□ -0.7
YBX3-212ENST00000542002 PHLPP2Q6ZVD8 1323 aa10.69□□□□□ -0.7
YBX3-212ENST00000542002 HIDE1A8MVS5 230 aa10.69□□□□□ -0.7
YBX3-212ENST00000542002 NRP1O14786 923 aa10.69□□□□□ -0.7
YBX3-212ENST00000542002 FSCN2O14926 492 aa10.69□□□□□ -0.7
YBX3-212ENST00000542002 LINC01565O15544 149 aa10.69□□□□□ -0.7
YBX3-212ENST00000542002 TRAK2O60296 914 aa10.69□□□□□ -0.7
YBX3-212ENST00000542002 FAM13AO94988 1023 aa10.69□□□□□ -0.7
YBX3-212ENST00000542002 KRT18P05783 430 aaKnown RBP10.69□□□□□ -0.7
YBX3-212ENST00000542002 LTBRP36941 435 aa10.69□□□□□ -0.7
YBX3-212ENST00000542002 ALDH7A1P49419 539 aaKnown RBP10.69□□□□□ -0.7
YBX3-212ENST00000542002 SMTNP53814 917 aa10.69□□□□□ -0.7
YBX3-212ENST00000542002 RNASELQ05823 741 aaKnown RBP10.69□□□□□ -0.7
YBX3-212ENST00000542002 DSC1Q08554 894 aa10.69□□□□□ -0.7
YBX3-212ENST00000542002 COL19A1Q14993 1142 aa10.69□□□□□ -0.7
YBX3-212ENST00000542002 SKIV2LQ15477 1246 aaKnown RBP10.69□□□□□ -0.7
YBX3-212ENST00000542002 NAB2Q15742 525 aa10.69□□□□□ -0.7
YBX3-212ENST00000542002 SEZ6Q53EL9 994 aa10.69□□□□□ -0.7
YBX3-212ENST00000542002 SLC39A4Q6P5W5 647 aa10.69□□□□□ -0.7
YBX3-212ENST00000542002 ALKAL1Q6UXT8 129 aa10.69□□□□□ -0.7
YBX3-212ENST00000542002 TAS1R1Q7RTX1 841 aa10.69□□□□□ -0.7
YBX3-212ENST00000542002 ZNF720Q7Z2F6 126 aa10.69□□□□□ -0.7
YBX3-212ENST00000542002 MRPS27Q92552 414 aaKnown RBP10.69□□□□□ -0.7
YBX3-212ENST00000542002 KCNN1Q92952 543 aa10.69□□□□□ -0.7
YBX3-212ENST00000542002 IGSF21Q96ID5 467 aa10.69□□□□□ -0.7
YBX3-212ENST00000542002 PAAF1Q9BRP4 392 aa10.69□□□□□ -0.7
YBX3-212ENST00000542002 STRA6Q9BX79 667 aa10.69□□□□□ -0.7
YBX3-212ENST00000542002 MRPL9Q9BYD2 267 aaKnown RBP10.69□□□□□ -0.7
YBX3-212ENST00000542002 MRPL4Q9BYD3 311 aaKnown RBP10.69□□□□□ -0.7
YBX3-212ENST00000542002 LMAN2LQ9H0V9 348 aa10.69□□□□□ -0.7
YBX3-212ENST00000542002 CDT1Q9H211 546 aa10.69□□□□□ -0.7
YBX3-212ENST00000542002 ZHX3Q9H4I2 956 aa10.69□□□□□ -0.7
YBX3-212ENST00000542002 GDPD2Q9HCC8 539 aa10.69□□□□□ -0.7
YBX3-212ENST00000542002 KBTBD4Q9NVX7 518 aa10.69□□□□□ -0.7
YBX3-212ENST00000542002 TBC1D7Q9P0N9 293 aa10.69□□□□□ -0.7
YBX3-212ENST00000542002 LARSQ9P2J5 1176 aaKnown RBP10.69□□□□□ -0.7
YBX3-212ENST00000542002 TBX20Q9UMR3 447 aa10.69□□□□□ -0.7
YBX3-212ENST00000542002 GDAQ9Y2T3 454 aa10.69□□□□□ -0.7
YBX3-212ENST00000542002 COL4A4P53420 1690 aaPredicted RBP10.69□□□□□ -0.7
YBX3-212ENST00000542002 MYO9BQ13459 2157 aa10.69□□□□□ -0.7
YBX3-212ENST00000542002 FRMD3A2A2Y4 597 aa10.68□□□□□ -0.7
YBX3-212ENST00000542002 TISP43B9A030 160 aa10.68□□□□□ -0.7
YBX3-212ENST00000542002 ANKRD63C9JTQ0 380 aa10.68□□□□□ -0.7
YBX3-212ENST00000542002 PER2O15055 1255 aa10.68□□□□□ -0.7
YBX3-212ENST00000542002 POLR2DO15514 142 aaKnown RBP10.68□□□□□ -0.7
YBX3-212ENST00000542002 RECQL4O94761 1208 aa10.68□□□□□ -0.7
YBX3-212ENST00000542002 EFEMP2O95967 443 aa10.68□□□□□ -0.7
YBX3-212ENST00000542002 ALDH2P05091 517 aa10.68□□□□□ -0.7
YBX3-212ENST00000542002 CASP1P29466 404 aa10.68□□□□□ -0.7
YBX3-212ENST00000542002 TXLNAP40222 546 aa10.68□□□□□ -0.7
YBX3-212ENST00000542002 CASP5P51878 434 aa10.68□□□□□ -0.7
YBX3-212ENST00000542002 OSTNP61366 133 aa10.68□□□□□ -0.7
YBX3-212ENST00000542002 RBM10P98175 930 aaKnown RBP10.68□□□□□ -0.7
YBX3-212ENST00000542002 GTF2BQ00403 316 aa10.68□□□□□ -0.7
YBX3-212ENST00000542002 UBE3AQ05086 875 aa10.68□□□□□ -0.7
YBX3-212ENST00000542002 DLX2Q07687 328 aaPredicted RBP10.68□□□□□ -0.7
YBX3-212ENST00000542002 KCNA1Q09470 495 aa10.68□□□□□ -0.7
YBX3-212ENST00000542002 TMEM132AQ24JP5 1023 aa10.68□□□□□ -0.7
YBX3-212ENST00000542002 CTC1Q2NKJ3 1217 aa10.68□□□□□ -0.7
YBX3-212ENST00000542002 RBM23Q86U06 439 aaKnown RBP10.68□□□□□ -0.7
YBX3-212ENST00000542002 SFR1Q86XK3 245 aa10.68□□□□□ -0.7
YBX3-212ENST00000542002 TMEM130Q8N3G9 435 aa10.68□□□□□ -0.7
YBX3-212ENST00000542002 GLIS3Q8NEA6 775 aa10.68□□□□□ -0.7
YBX3-212ENST00000542002 URGCPQ8TCY9 931 aa10.68□□□□□ -0.7
YBX3-212ENST00000542002 AUTS2Q8WXX7 1259 aa10.68□□□□□ -0.7
YBX3-212ENST00000542002 HPS3Q969F9 1004 aa10.68□□□□□ -0.7
YBX3-212ENST00000542002 DHX58Q96C10 678 aa10.68□□□□□ -0.7
YBX3-212ENST00000542002 NSUN3Q9H649 340 aaKnown RBP10.68□□□□□ -0.7
YBX3-212ENST00000542002 IGFLR1Q9H665 355 aa10.68□□□□□ -0.7
YBX3-212ENST00000542002 MARCH5Q9NX47 278 aa10.68□□□□□ -0.7
YBX3-212ENST00000542002 KANSL3Q9P2N6 904 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms