RNA–Protein interactions for RNA: ENST00000541953.5

CLSTN3-213, Transcript of calsyntenin 3, humanhuman

TSL 5

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-213ENST00000541953 NECAB1Q8N987 351 aa17.22■□□□□ 0.35
CLSTN3-213ENST00000541953 CMASQ8NFW8 434 aaPredicted RBP17.22■□□□□ 0.35
CLSTN3-213ENST00000541953 TCP11Q8WWU5 503 aa17.22■□□□□ 0.35
CLSTN3-213ENST00000541953 ACSF2Q96CM8 615 aaPredicted RBP17.22■□□□□ 0.35
CLSTN3-213ENST00000541953 CSRNP2Q9H175 543 aa17.22■□□□□ 0.35
CLSTN3-213ENST00000541953 RXFP1Q9HBX9 757 aa17.22■□□□□ 0.35
CLSTN3-213ENST00000541953 GPRC5CQ9NQ84 441 aa17.22■□□□□ 0.35
CLSTN3-213ENST00000541953 CHST7Q9NS84 486 aa17.22■□□□□ 0.35
CLSTN3-213ENST00000541953 KLK14Q9P0G3 267 aa17.22■□□□□ 0.35
CLSTN3-213ENST00000541953 KANSL3Q9P2N6 904 aa17.22■□□□□ 0.35
CLSTN3-213ENST00000541953 PPME1Q9Y570 386 aa17.22■□□□□ 0.35
CLSTN3-213ENST00000541953 CLUHO75153 1309 aa17.21■□□□□ 0.35
CLSTN3-213ENST00000541953 CARNS1A5YM72 827 aa17.21■□□□□ 0.35
CLSTN3-213ENST00000541953 DKC1O60832 514 aaKnown RBP eCLIP17.21■□□□□ 0.35
CLSTN3-213ENST00000541953 GLUD1P00367 558 aa17.21■□□□□ 0.35
CLSTN3-213ENST00000541953 CFHP08603 1231 aa17.21■□□□□ 0.35
CLSTN3-213ENST00000541953 ARL2P36404 184 aa17.21■□□□□ 0.35
CLSTN3-213ENST00000541953 DSG1Q02413 1049 aa17.21■□□□□ 0.35
CLSTN3-213ENST00000541953 NOTUMQ6P988 496 aa17.21■□□□□ 0.35
CLSTN3-213ENST00000541953 PALB2Q86YC2 1186 aa17.21■□□□□ 0.35
CLSTN3-213ENST00000541953 PIGOQ8TEQ8 1089 aa17.21■□□□□ 0.35
CLSTN3-213ENST00000541953 HSD17B14Q9BPX1 270 aa17.21■□□□□ 0.35
CLSTN3-213ENST00000541953 WDR6Q9NNW5 1121 aaKnown RBP17.21■□□□□ 0.35
CLSTN3-213ENST00000541953 ORC3Q9UBD5 711 aaPredicted RBP17.21■□□□□ 0.35
CLSTN3-213ENST00000541953 USP20Q9Y2K6 914 aa17.21■□□□□ 0.35
CLSTN3-213ENST00000541953 VWA8A3KMH1 1905 aa17.21■□□□□ 0.35
CLSTN3-213ENST00000541953 EPB41L2O43491 1005 aaKnown RBP17.2■□□□□ 0.34
CLSTN3-213ENST00000541953 GAS2O43903 313 aaKnown RBP17.2■□□□□ 0.34
CLSTN3-213ENST00000541953 NPTXRO95502 500 aa17.2■□□□□ 0.34
CLSTN3-213ENST00000541953 EDN1P05305 212 aa17.2■□□□□ 0.34
CLSTN3-213ENST00000541953 ADH1AP07327 375 aa17.2■□□□□ 0.34
CLSTN3-213ENST00000541953 GBP2P32456 591 aaPredicted RBP17.2■□□□□ 0.34
CLSTN3-213ENST00000541953 CCDC105Q8IYK2 499 aa17.2■□□□□ 0.34
CLSTN3-213ENST00000541953 IRF2BPLQ9H1B7 796 aa17.2■□□□□ 0.34
CLSTN3-213ENST00000541953 POLR3FQ9H1D9 316 aaPredicted RBP17.2■□□□□ 0.34
CLSTN3-213ENST00000541953 POTEMA6NI47 508 aa17.19■□□□□ 0.34
CLSTN3-213ENST00000541953 ASAP2O43150 1006 aa17.19■□□□□ 0.34
CLSTN3-213ENST00000541953 TGM5O43548 720 aa17.19■□□□□ 0.34
CLSTN3-213ENST00000541953 MARCH6O60337 910 aa17.19■□□□□ 0.34
CLSTN3-213ENST00000541953 CDKL5O76039 1030 aa17.19■□□□□ 0.34
CLSTN3-213ENST00000541953 LYPLA2O95372 231 aa17.19■□□□□ 0.34
CLSTN3-213ENST00000541953 IGFBP6P24592 240 aaPredicted RBP17.19■□□□□ 0.34
CLSTN3-213ENST00000541953 RARRES1P49788 294 aa17.19■□□□□ 0.34
CLSTN3-213ENST00000541953 ST3GAL1Q11201 340 aa17.19■□□□□ 0.34
CLSTN3-213ENST00000541953 RTP2Q5QGT7 225 aa17.19■□□□□ 0.34
CLSTN3-213ENST00000541953 FUT10Q6P4F1 479 aa17.19■□□□□ 0.34
CLSTN3-213ENST00000541953 PRSS55Q6UWB4 352 aaPredicted RBP17.19■□□□□ 0.34
CLSTN3-213ENST00000541953 OTUD6AQ7L8S5 288 aa17.19■□□□□ 0.34
CLSTN3-213ENST00000541953 CNNM3Q8NE01 707 aa17.19■□□□□ 0.34
CLSTN3-213ENST00000541953 HASPINQ8TF76 798 aa17.19■□□□□ 0.34
CLSTN3-213ENST00000541953 SMG7Q92540 1137 aaKnown RBP17.19■□□□□ 0.34
CLSTN3-213ENST00000541953 CCDC51Q96ER9 411 aa17.19■□□□□ 0.34
CLSTN3-213ENST00000541953 TMEM60Q9H2L4 133 aa17.19■□□□□ 0.34
CLSTN3-213ENST00000541953 FBXL21Q9UKT6 434 aa17.19■□□□□ 0.34
CLSTN3-213ENST00000541953 CA14Q9ULX7 337 aa17.19■□□□□ 0.34
CLSTN3-213ENST00000541953 MYH15Q9Y2K3 1946 aa17.18■□□□□ 0.34
CLSTN3-213ENST00000541953 JAK2O60674 1132 aa17.18■□□□□ 0.34
CLSTN3-213ENST00000541953 USO1O60763 962 aaKnown RBP17.18■□□□□ 0.34
CLSTN3-213ENST00000541953 PAPLNO95428 1278 aa17.18■□□□□ 0.34
CLSTN3-213ENST00000541953 AXLP30530 894 aa17.18■□□□□ 0.34
CLSTN3-213ENST00000541953 KRT2P35908 639 aa17.18■□□□□ 0.34
CLSTN3-213ENST00000541953 MXD4Q14582 209 aaPredicted RBP17.18■□□□□ 0.34
CLSTN3-213ENST00000541953 ANGPT1Q15389 498 aa17.18■□□□□ 0.34
CLSTN3-213ENST00000541953 ME3Q16798 604 aa17.18■□□□□ 0.34
CLSTN3-213ENST00000541953 LILRA6Q6PI73 481 aa17.18■□□□□ 0.34
CLSTN3-213ENST00000541953 GET4Q7L5D6 327 aaPredicted RBP17.18■□□□□ 0.34
CLSTN3-213ENST00000541953 MAEAQ7L5Y9 396 aa17.18■□□□□ 0.34
CLSTN3-213ENST00000541953 EXOC8Q8IYI6 725 aa17.18■□□□□ 0.34
CLSTN3-213ENST00000541953 SLFN12Q8IYM2 578 aa17.18■□□□□ 0.34
CLSTN3-213ENST00000541953 DTWD2Q8NBA8 298 aa17.18■□□□□ 0.34
CLSTN3-213ENST00000541953 RIN2Q8WYP3 895 aaPredicted RBP17.18■□□□□ 0.34
CLSTN3-213ENST00000541953 NT5C3AQ9H0P0 336 aa17.18■□□□□ 0.34
CLSTN3-213ENST00000541953 UBN1Q9NPG3 1134 aa17.18■□□□□ 0.34
CLSTN3-213ENST00000541953 EPS15L1Q9UBC2 864 aa17.18■□□□□ 0.34
CLSTN3-213ENST00000541953 BTBD18B2RXH4 712 aa17.17■□□□□ 0.34
CLSTN3-213ENST00000541953 ADAM12O43184 909 aa17.17■□□□□ 0.34
CLSTN3-213ENST00000541953 DGAT1O75907 488 aa17.17■□□□□ 0.34
CLSTN3-213ENST00000541953 SPATA31C1P0DKV0 1188 aa17.17■□□□□ 0.34
CLSTN3-213ENST00000541953 NTHL1P78549 312 aa17.17■□□□□ 0.34
CLSTN3-213ENST00000541953 CALCRLQ16602 461 aa17.17■□□□□ 0.34
CLSTN3-213ENST00000541953 SLC44A3Q8N4M1 653 aa17.17■□□□□ 0.34
CLSTN3-213ENST00000541953 BSNDQ8WZ55 320 aa17.17■□□□□ 0.34
CLSTN3-213ENST00000541953 MTMR9Q96QG7 549 aa17.17■□□□□ 0.34
CLSTN3-213ENST00000541953 RPP25Q9BUL9 199 aaKnown RBP17.17■□□□□ 0.34
CLSTN3-213ENST00000541953 TTC12Q9H892 705 aaPredicted RBP17.17■□□□□ 0.34
CLSTN3-213ENST00000541953 ANKEF1Q9NU02 776 aa17.17■□□□□ 0.34
CLSTN3-213ENST00000541953 IGSF9Q9P2J2 1179 aa17.17■□□□□ 0.34
CLSTN3-213ENST00000541953 STK39Q9UEW8 545 aa17.17■□□□□ 0.34
CLSTN3-213ENST00000541953 ADAM28Q9UKQ2 775 aa17.17■□□□□ 0.34
CLSTN3-213ENST00000541953 PCDHA12Q9UN75 941 aa17.17■□□□□ 0.34
CLSTN3-213ENST00000541953 GIT1Q9Y2X7 761 aa17.17■□□□□ 0.34
CLSTN3-213ENST00000541953 NOTCH4Q99466 2003 aa17.16■□□□□ 0.34
CLSTN3-213ENST00000541953 A0A1B0GUA9 196 aa17.16■□□□□ 0.34
CLSTN3-213ENST00000541953 CASTOR2A6NHX0 329 aa17.16■□□□□ 0.34
CLSTN3-213ENST00000541953 PTGESO14684 152 aa17.16■□□□□ 0.34
CLSTN3-213ENST00000541953 KIF4AO95239 1232 aa17.16■□□□□ 0.34
CLSTN3-213ENST00000541953 TXKP42681 527 aa17.16■□□□□ 0.34
CLSTN3-213ENST00000541953 POU5F1BQ06416 359 aa17.16■□□□□ 0.34
CLSTN3-213ENST00000541953 TFDP1Q14186 410 aa17.16■□□□□ 0.34
CLSTN3-213ENST00000541953 SLC27A1Q6PCB7 646 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms