RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 MCM4P33991 863 aa16.96■□□□□ 0.31
DDB1-218ENST00000540784 GATMP50440 423 aa16.96■□□□□ 0.31
DDB1-218ENST00000540784 BTG3Q14201 252 aaPredicted RBP16.96■□□□□ 0.31
DDB1-218ENST00000540784 CAMK4Q16566 473 aa16.96■□□□□ 0.31
DDB1-218ENST00000540784 GLB1LQ6UWU2 654 aa16.96■□□□□ 0.31
DDB1-218ENST00000540784 AGMOQ6ZNB7 445 aa16.96■□□□□ 0.31
DDB1-218ENST00000540784 SCFD1Q8WVM8 642 aa16.96■□□□□ 0.31
DDB1-218ENST00000540784 ERCC4Q92889 916 aaPredicted RBP16.96■□□□□ 0.31
DDB1-218ENST00000540784 TIFAQ96CG3 184 aa16.96■□□□□ 0.31
DDB1-218ENST00000540784 TMEM117Q9H0C3 514 aa16.96■□□□□ 0.31
DDB1-218ENST00000540784 CDT1Q9H211 546 aa16.96■□□□□ 0.31
DDB1-218ENST00000540784 NXF3Q9H4D5 531 aaKnown RBP16.96■□□□□ 0.31
DDB1-218ENST00000540784 SLC28A3Q9HAS3 691 aa16.96■□□□□ 0.31
DDB1-218ENST00000540784 SNTG2Q9NY99 539 aa16.96■□□□□ 0.31
DDB1-218ENST00000540784 YBX2Q9Y2T7 364 aaKnown RBP16.96■□□□□ 0.31
DDB1-218ENST00000540784 GIT1Q9Y2X7 761 aa16.96■□□□□ 0.31
DDB1-218ENST00000540784 MYH11P35749 1972 aa16.96■□□□□ 0.31
DDB1-218ENST00000540784 MICAL3Q7RTP6 2002 aa16.96■□□□□ 0.3
DDB1-218ENST00000540784 CA3P07451 260 aa16.95■□□□□ 0.3
DDB1-218ENST00000540784 HARSP12081 509 aaKnown RBP16.95■□□□□ 0.3
DDB1-218ENST00000540784 AKAP5P24588 427 aa16.95■□□□□ 0.3
DDB1-218ENST00000540784 DNAJB2P25686 324 aa16.95■□□□□ 0.3
DDB1-218ENST00000540784 MCL1Q07820 350 aa16.95■□□□□ 0.3
DDB1-218ENST00000540784 PAN2Q504Q3 1202 aaKnown RBP16.95■□□□□ 0.3
DDB1-218ENST00000540784 CLLU1OSQ5K130 101 aa16.95■□□□□ 0.3
DDB1-218ENST00000540784 THNSL1Q8IYQ7 743 aa16.95■□□□□ 0.3
DDB1-218ENST00000540784 CMTR2Q8IYT2 770 aaKnown RBP16.95■□□□□ 0.3
DDB1-218ENST00000540784 FIBCD1Q8N539 461 aa16.95■□□□□ 0.3
DDB1-218ENST00000540784 SPATA20Q8TB22 786 aa16.95■□□□□ 0.3
DDB1-218ENST00000540784 HELQQ8TDG4 1101 aa16.95■□□□□ 0.3
DDB1-218ENST00000540784 CASD1Q96PB1 797 aa16.95■□□□□ 0.3
DDB1-218ENST00000540784 CCDC94Q9BW85 323 aaPredicted RBP16.95■□□□□ 0.3
DDB1-218ENST00000540784 NKX2-4Q9H2Z4 354 aa16.95■□□□□ 0.3
DDB1-218ENST00000540784 RSAD1Q9HA92 442 aa16.95■□□□□ 0.3
DDB1-218ENST00000540784 RNF19AQ9NV58 838 aa16.95■□□□□ 0.3
DDB1-218ENST00000540784 GDAQ9Y2T3 454 aa16.95■□□□□ 0.3
DDB1-218ENST00000540784 TTC3P53804 2025 aa16.95■□□□□ 0.3
DDB1-218ENST00000540784 RANBP2P49792 3224 aaKnown RBP16.94■□□□□ 0.3
DDB1-218ENST00000540784 A0A0B4J269 797 aa16.94■□□□□ 0.3
DDB1-218ENST00000540784 LCHNA4D1U4 455 aa16.94■□□□□ 0.3
DDB1-218ENST00000540784 MEIS3P2A8K0S8 358 aa16.94■□□□□ 0.3
DDB1-218ENST00000540784 SOX1O00570 391 aaPredicted RBP16.94■□□□□ 0.3
DDB1-218ENST00000540784 ABLIM1O14639 778 aa16.94■□□□□ 0.3
DDB1-218ENST00000540784 KIF20AO95235 890 aa16.94■□□□□ 0.3
DDB1-218ENST00000540784 HOXD13P35453 343 aa16.94■□□□□ 0.3
DDB1-218ENST00000540784 GRM5P41594 1212 aa16.94■□□□□ 0.3
DDB1-218ENST00000540784 OSTNP61366 133 aa16.94■□□□□ 0.3
DDB1-218ENST00000540784 NOLC1Q14978 699 aaKnown RBP eCLIP16.94■□□□□ 0.33e-6■□□□□ 10.5
DDB1-218ENST00000540784 KYAT1Q16773 422 aa16.94■□□□□ 0.3
DDB1-218ENST00000540784 NOMO2Q5JPE7 1267 aa16.94■□□□□ 0.3
DDB1-218ENST00000540784 SLC39A4Q6P5W5 647 aa16.94■□□□□ 0.3
DDB1-218ENST00000540784 NELFCDQ8IXH7 590 aa16.94■□□□□ 0.3
DDB1-218ENST00000540784 KIAA0895Q8NCT3 520 aa16.94■□□□□ 0.3
DDB1-218ENST00000540784 URGCPQ8TCY9 931 aa16.94■□□□□ 0.3
DDB1-218ENST00000540784 GPT2Q8TD30 523 aa16.94■□□□□ 0.3
DDB1-218ENST00000540784 SP7Q8TDD2 431 aaPredicted RBP16.94■□□□□ 0.3
DDB1-218ENST00000540784 RSPH1Q8WYR4 309 aa16.94■□□□□ 0.3
DDB1-218ENST00000540784 POMGNT1Q8WZA1 660 aa16.94■□□□□ 0.3
DDB1-218ENST00000540784 ACAP3Q96P50 834 aa16.94■□□□□ 0.3
DDB1-218ENST00000540784 MSTO1Q9BUK6 570 aa16.94■□□□□ 0.3
DDB1-218ENST00000540784 GTPBP4Q9BZE4 634 aaKnown RBP16.94■□□□□ 0.3
DDB1-218ENST00000540784 IKZF4Q9H2S9 585 aa16.94■□□□□ 0.3
DDB1-218ENST00000540784 KLK14Q9P0G3 267 aa16.94■□□□□ 0.3
DDB1-218ENST00000540784 KANSL3Q9P2N6 904 aa16.94■□□□□ 0.3
DDB1-218ENST00000540784 INPP5FQ9Y2H2 1132 aa16.94■□□□□ 0.3
DDB1-218ENST00000540784 STYXL1Q9Y6J8 313 aa16.94■□□□□ 0.3
DDB1-218ENST00000540784 UBE4BO95155 1302 aa16.94■□□□□ 0.3
DDB1-218ENST00000540784 ARL5CA6NH57 179 aa16.93■□□□□ 0.3
DDB1-218ENST00000540784 YARSP54577 528 aaKnown RBP16.93■□□□□ 0.3
DDB1-218ENST00000540784 SNRPFP62306 86 aaKnown RBP16.93■□□□□ 0.3
DDB1-218ENST00000540784 KNOP1Q1ED39 458 aaKnown RBP16.93■□□□□ 0.3
DDB1-218ENST00000540784 BMT2Q1RMZ1 405 aa16.93■□□□□ 0.3
DDB1-218ENST00000540784 ZNF658Q5TYW1 1059 aaPredicted RBP16.93■□□□□ 0.3
DDB1-218ENST00000540784 LRCH3Q96II8 777 aa16.93■□□□□ 0.3
DDB1-218ENST00000540784 GAD1Q99259 594 aa16.93■□□□□ 0.3
DDB1-218ENST00000540784 HAPLN2Q9GZV7 340 aa16.93■□□□□ 0.3
DDB1-218ENST00000540784 GBP3Q9H0R5 595 aa16.93■□□□□ 0.3
DDB1-218ENST00000540784 CLSTN2Q9H4D0 955 aa16.93■□□□□ 0.3
DDB1-218ENST00000540784 RC3H2Q9HBD1 1191 aaKnown RBP16.93■□□□□ 0.3
DDB1-218ENST00000540784 TYW1Q9NV66 732 aaKnown RBP16.93■□□□□ 0.3
DDB1-218ENST00000540784 AGO2Q9UKV8 859 aaKnown RBP16.93■□□□□ 0.3
DDB1-218ENST00000540784 LINC01553A4QN01 128 aa16.92■□□□□ 0.3
DDB1-218ENST00000540784 TISP43B9A030 160 aa16.92■□□□□ 0.3
DDB1-218ENST00000540784 OGTO15294 1046 aa16.92■□□□□ 0.3
DDB1-218ENST00000540784 RECQL4O94761 1208 aa16.92■□□□□ 0.3
DDB1-218ENST00000540784 MBD3O95983 291 aa16.92■□□□□ 0.3
DDB1-218ENST00000540784 CLTAP09496 248 aa16.92■□□□□ 0.3
DDB1-218ENST00000540784 GARTP22102 1010 aa16.92■□□□□ 0.3
DDB1-218ENST00000540784 TAP1Q03518 808 aa16.92■□□□□ 0.3
DDB1-218ENST00000540784 RNASELQ05823 741 aaKnown RBP16.92■□□□□ 0.3
DDB1-218ENST00000540784 SEZ6Q53EL9 994 aa16.92■□□□□ 0.3
DDB1-218ENST00000540784 SPOUT1Q5T280 376 aaKnown RBP16.92■□□□□ 0.3
DDB1-218ENST00000540784 PPP2R2DQ66LE6 453 aa16.92■□□□□ 0.3
DDB1-218ENST00000540784 ISM2Q6H9L7 571 aa16.92■□□□□ 0.3
DDB1-218ENST00000540784 HS2ST1Q7LGA3 356 aa16.92■□□□□ 0.3
DDB1-218ENST00000540784 MRPL9Q9BYD2 267 aaKnown RBP16.92■□□□□ 0.3
DDB1-218ENST00000540784 TOPORSQ9NS56 1045 aaPredicted RBP16.92■□□□□ 0.3
DDB1-218ENST00000540784 KIAA1468Q9P260 1216 aa16.92■□□□□ 0.3
DDB1-218ENST00000540784 MAN1B1Q9UKM7 699 aa16.92■□□□□ 0.3
DDB1-218ENST00000540784 MAPK8IP1Q9UQF2 711 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms