RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 AZI2Q9H6S1 392 aa9.32□□□□□ -0.92
DDB1-217ENST00000540166 RAVER2Q9HCJ3 691 aaKnown RBP9.32□□□□□ -0.92
DDB1-217ENST00000540166 ZNF112Q9UJU3 913 aa9.32□□□□□ -0.92
DDB1-217ENST00000540166 COL24A1Q17RW2 1714 aa9.32□□□□□ -0.92
DDB1-217ENST00000540166 SLC15A5A6NIM6 579 aa9.31□□□□□ -0.92
DDB1-217ENST00000540166 LRRC53A6NM62 1247 aa9.31□□□□□ -0.92
DDB1-217ENST00000540166 CCDC188H7C350 402 aa9.31□□□□□ -0.92
DDB1-217ENST00000540166 DDAH1O94760 285 aa9.31□□□□□ -0.92
DDB1-217ENST00000540166 FDX1P10109 184 aa9.31□□□□□ -0.92
DDB1-217ENST00000540166 ZBTB16Q05516 673 aa9.31□□□□□ -0.92
DDB1-217ENST00000540166 ASIC2Q16515 512 aa9.31□□□□□ -0.92
DDB1-217ENST00000540166 ZNF662Q6ZS27 426 aa9.31□□□□□ -0.92
DDB1-217ENST00000540166 ADAT2Q7Z6V5 191 aaKnown RBP9.31□□□□□ -0.92
DDB1-217ENST00000540166 TBC1D5Q92609 795 aa9.31□□□□□ -0.92
DDB1-217ENST00000540166 ZNF570Q96NI8 536 aa9.31□□□□□ -0.92
DDB1-217ENST00000540166 SPATC1LQ9H0A9 340 aa9.31□□□□□ -0.92
DDB1-217ENST00000540166 INTUQ9ULD6 942 aa9.31□□□□□ -0.92
DDB1-217ENST00000540166 SPDYE3A6NKU9 549 aa9.31□□□□□ -0.92
DDB1-217ENST00000540166 ZBBXA8MT70 800 aa9.31□□□□□ -0.92
DDB1-217ENST00000540166 CCNE1P24864 410 aa9.31□□□□□ -0.92
DDB1-217ENST00000540166 ZNF76P36508 570 aa9.31□□□□□ -0.92
DDB1-217ENST00000540166 TECP42680 631 aa9.31□□□□□ -0.92
DDB1-217ENST00000540166 USP4Q13107 963 aa9.31□□□□□ -0.92
DDB1-217ENST00000540166 C12orf60Q5U649 245 aa9.31□□□□□ -0.92
DDB1-217ENST00000540166 VPS52Q8N1B4 723 aa9.31□□□□□ -0.92
DDB1-217ENST00000540166 C1orf131Q8NDD1 294 aaKnown RBP9.31□□□□□ -0.92
DDB1-217ENST00000540166 RAB34Q9BZG1 259 aa9.31□□□□□ -0.92
DDB1-217ENST00000540166 ABCF3Q9NUQ8 709 aa9.31□□□□□ -0.92
DDB1-217ENST00000540166 AMACRQ9UHK6 382 aa9.31□□□□□ -0.92
DDB1-217ENST00000540166 FEM1BQ9UK73 627 aa9.31□□□□□ -0.92
DDB1-217ENST00000540166 ARL2BPQ9Y2Y0 163 aa9.31□□□□□ -0.92
DDB1-217ENST00000540166 DAAM1Q9Y4D1 1078 aa9.31□□□□□ -0.92
DDB1-217ENST00000540166 POLR2AP24928 1970 aaKnown RBP9.31□□□□□ -0.92
DDB1-217ENST00000540166 TCP11X1B4DZS4 312 aa9.31□□□□□ -0.92
DDB1-217ENST00000540166 RASGRF2O14827 1237 aa9.31□□□□□ -0.92
DDB1-217ENST00000540166 SGPL1O95470 568 aa9.31□□□□□ -0.92
DDB1-217ENST00000540166 CALCOCO2Q13137 446 aa9.31□□□□□ -0.92
DDB1-217ENST00000540166 SKIV2LQ15477 1246 aaKnown RBP9.31□□□□□ -0.92
DDB1-217ENST00000540166 MEA1Q16626 185 aa9.31□□□□□ -0.92
DDB1-217ENST00000540166 ZNF449Q6P9G9 518 aa9.31□□□□□ -0.92
DDB1-217ENST00000540166 CHRDL2Q6WN34 429 aa9.31□□□□□ -0.92
DDB1-217ENST00000540166 APBB1IPQ7Z5R6 666 aaPredicted RBP9.31□□□□□ -0.92
DDB1-217ENST00000540166 ARHGAP18Q8N392 663 aa9.31□□□□□ -0.92
DDB1-217ENST00000540166 GALNT15Q8N3T1 639 aa9.31□□□□□ -0.92
DDB1-217ENST00000540166 SRBD1Q8N5C6 995 aaKnown RBP9.31□□□□□ -0.92
DDB1-217ENST00000540166 CCDC97Q96F63 343 aaPredicted RBP9.31□□□□□ -0.92
DDB1-217ENST00000540166 TLR10Q9BXR5 811 aa9.31□□□□□ -0.92
DDB1-217ENST00000540166 NDST4Q9H3R1 872 aa9.31□□□□□ -0.92
DDB1-217ENST00000540166 GABRQQ9UN88 632 aa9.31□□□□□ -0.92
DDB1-217ENST00000540166 PCDHGC5Q9Y5F6 944 aa9.31□□□□□ -0.92
DDB1-217ENST00000540166 TCRBV5S4A2TA0A5A2 114 aa9.3□□□□□ -0.92
DDB1-217ENST00000540166 RCAN1P53805 252 aa9.3□□□□□ -0.92
DDB1-217ENST00000540166 USH1GQ495M9 461 aa9.3□□□□□ -0.92
DDB1-217ENST00000540166 PHLDB3Q6NSJ2 640 aa9.3□□□□□ -0.92
DDB1-217ENST00000540166 ADSSL1Q8N142 457 aa9.3□□□□□ -0.92
DDB1-217ENST00000540166 PNMA1Q8ND90 353 aa9.3□□□□□ -0.92
DDB1-217ENST00000540166 GDAP1Q8TB36 358 aa9.3□□□□□ -0.92
DDB1-217ENST00000540166 CCDC77Q9BR77 488 aa9.3□□□□□ -0.92
DDB1-217ENST00000540166 MTA3Q9BTC8 594 aa9.3□□□□□ -0.92
DDB1-217ENST00000540166 C11orf49Q9H6J7 331 aa9.3□□□□□ -0.92
DDB1-217ENST00000540166 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.3□□□□□ -0.92
DDB1-217ENST00000540166 ANKRD36CQ5JPF3 1778 aa9.3□□□□□ -0.92
DDB1-217ENST00000540166 PAPPA2Q9BXP8 1791 aa9.3□□□□□ -0.92
DDB1-217ENST00000540166 OPHN1O60890 802 aa9.3□□□□□ -0.92
DDB1-217ENST00000540166 ADORA2AP29274 412 aa9.3□□□□□ -0.92
DDB1-217ENST00000540166 RFC5P40937 340 aa9.3□□□□□ -0.92
DDB1-217ENST00000540166 ZNF268Q14587 947 aaPredicted RBP9.3□□□□□ -0.92
DDB1-217ENST00000540166 SPRED3Q2MJR0 410 aa9.3□□□□□ -0.92
DDB1-217ENST00000540166 ARL6IP4Q66PJ3 421 aaKnown RBP9.3□□□□□ -0.92
DDB1-217ENST00000540166 SH3BP5LQ7L8J4 393 aa9.3□□□□□ -0.92
DDB1-217ENST00000540166 OTUD6AQ7L8S5 288 aa9.3□□□□□ -0.92
DDB1-217ENST00000540166 SDCCAG8Q86SQ7 713 aaPredicted RBP9.3□□□□□ -0.92
DDB1-217ENST00000540166 CLEC10AQ8IUN9 316 aa9.3□□□□□ -0.92
DDB1-217ENST00000540166 USP38Q8NB14 1042 aa9.3□□□□□ -0.92
DDB1-217ENST00000540166 SPATA20Q8TB22 786 aa9.3□□□□□ -0.92
DDB1-217ENST00000540166 EPAS1Q99814 870 aa9.3□□□□□ -0.92
DDB1-217ENST00000540166 C6orf50Q9HD87 102 aa9.3□□□□□ -0.92
DDB1-217ENST00000540166 MLXIPLQ9NP71 852 aa9.3□□□□□ -0.92
DDB1-217ENST00000540166 FGFR1OP2Q9NVK5 253 aa9.3□□□□□ -0.92
DDB1-217ENST00000540166 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.3□□□□□ -0.929e-7■■■□□ 16.8
DDB1-217ENST00000540166 ANAPC4Q9UJX5 808 aa9.3□□□□□ -0.92
DDB1-217ENST00000540166 PLAGL2Q9UPG8 496 aa9.3□□□□□ -0.92
DDB1-217ENST00000540166 SMIM22K7EJ46 135 aa9.3□□□□□ -0.92
DDB1-217ENST00000540166 ATP5HO75947 161 aa9.3□□□□□ -0.92
DDB1-217ENST00000540166 LMNAP02545 664 aaKnown RBP9.3□□□□□ -0.92
DDB1-217ENST00000540166 GOLGA8HP0CJ92 632 aa9.3□□□□□ -0.92
DDB1-217ENST00000540166 POLR2FP61218 127 aaKnown RBP9.3□□□□□ -0.92
DDB1-217ENST00000540166 PKN1Q16512 942 aa9.3□□□□□ -0.92
DDB1-217ENST00000540166 GNASQ5JWF2 1037 aa9.3□□□□□ -0.92
DDB1-217ENST00000540166 ERMARDQ5T6L9 678 aa9.3□□□□□ -0.92
DDB1-217ENST00000540166 SH3RF1Q7Z6J0 888 aa9.3□□□□□ -0.92
DDB1-217ENST00000540166 MYLK4Q86YV6 388 aaPredicted RBP9.3□□□□□ -0.92
DDB1-217ENST00000540166 SLC17A8Q8NDX2 589 aa9.3□□□□□ -0.92
DDB1-217ENST00000540166 RPS6KC1Q96S38 1066 aa9.3□□□□□ -0.92
DDB1-217ENST00000540166 CENPKQ9BS16 269 aa9.3□□□□□ -0.92
DDB1-217ENST00000540166 EHMT1Q9H9B1 1298 aa9.3□□□□□ -0.92
DDB1-217ENST00000540166 RNF146Q9NTX7 359 aa9.3□□□□□ -0.92
DDB1-217ENST00000540166 ADAMTS1Q9UHI8 967 aa9.3□□□□□ -0.92
DDB1-217ENST00000540166 DICER1Q9UPY3 1922 aaKnown RBP9.3□□□□□ -0.92
DDB1-217ENST00000540166 POTEFA5A3E0 1075 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms