RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 CNGA1P29973 690 aa15.13■□□□□ 0.01
UBE3B-210ENST00000539599 VPS41P49754 854 aa15.13■□□□□ 0.01
UBE3B-210ENST00000539599 PEX5P50542 639 aa15.13■□□□□ 0.01
UBE3B-210ENST00000539599 CCDC137Q6PK04 289 aaKnown RBP15.13■□□□□ 0.01
UBE3B-210ENST00000539599 SEC14L1Q92503 715 aa15.13■□□□□ 0.01
UBE3B-210ENST00000539599 AZI2Q9H6S1 392 aa15.13■□□□□ 0.01
UBE3B-210ENST00000539599 TCEAL9Q9UHQ7 104 aa15.13■□□□□ 0.01
UBE3B-210ENST00000539599 RPTORQ8N122 1335 aa15.13■□□□□ 0.01
UBE3B-210ENST00000539599 ZNFX1Q9P2E3 1918 aaKnown RBP15.13■□□□□ 0.01
UBE3B-210ENST00000539599 ZNF862O60290 1169 aa15.13■□□□□ 0.01
UBE3B-210ENST00000539599 RARAP10276 462 aa15.13■□□□□ 0.01
UBE3B-210ENST00000539599 PPP2R2AP63151 447 aa15.13■□□□□ 0.01
UBE3B-210ENST00000539599 LRIG3Q6UXM1 1119 aa15.13■□□□□ 0.01
UBE3B-210ENST00000539599 CYFIP1Q7L576 1253 aa15.13■□□□□ 0.01
UBE3B-210ENST00000539599 POMGNT1Q8WZA1 660 aa15.13■□□□□ 0.01
UBE3B-210ENST00000539599 ATG4CQ96DT6 458 aa15.13■□□□□ 0.01
UBE3B-210ENST00000539599 SELENOSQ9BQE4 189 aa15.13■□□□□ 0.01
UBE3B-210ENST00000539599 PGAP2Q9UHJ9 254 aa15.13■□□□□ 0.01
UBE3B-210ENST00000539599 CYP11B1P15538 503 aa15.12■□□□□ 0.01
UBE3B-210ENST00000539599 DPEP1P16444 411 aa15.12■□□□□ 0.01
UBE3B-210ENST00000539599 GTF2BQ00403 316 aa15.12■□□□□ 0.01
UBE3B-210ENST00000539599 CXCL9Q07325 125 aa15.12■□□□□ 0.01
UBE3B-210ENST00000539599 SEZ6Q53EL9 994 aa15.12■□□□□ 0.01
UBE3B-210ENST00000539599 PASD1Q8IV76 773 aa15.12■□□□□ 0.01
UBE3B-210ENST00000539599 PRPF38AQ8NAV1 312 aaKnown RBP15.12■□□□□ 0.01
UBE3B-210ENST00000539599 TMEM161BQ8NDZ6 487 aa15.12■□□□□ 0.01
UBE3B-210ENST00000539599 HELQQ8TDG4 1101 aa15.12■□□□□ 0.01
UBE3B-210ENST00000539599 CPA5Q8WXQ8 436 aa15.12■□□□□ 0.01
UBE3B-210ENST00000539599 TXLNGYQ9BZA5 131 aa15.12■□□□□ 0.01
UBE3B-210ENST00000539599 TMEM206Q9H813 350 aa15.12■□□□□ 0.01
UBE3B-210ENST00000539599 FAM114A2Q9NRY5 505 aa15.12■□□□□ 0.01
UBE3B-210ENST00000539599 KCND2Q9NZV8 630 aa15.12■□□□□ 0.01
UBE3B-210ENST00000539599 TBX20Q9UMR3 447 aa15.12■□□□□ 0.01
UBE3B-210ENST00000539599 GOLGA6L10A0A0M3HER8 536 aa15.12■□□□□ 0.01
UBE3B-210ENST00000539599 ASNSP08243 561 aa15.12■□□□□ 0.01
UBE3B-210ENST00000539599 PMS2P54278 862 aa15.12■□□□□ 0.01
UBE3B-210ENST00000539599 BAATQ14032 418 aaPredicted RBP15.12■□□□□ 0.01
UBE3B-210ENST00000539599 KCNV1Q6PIU1 500 aa15.12■□□□□ 0.01
UBE3B-210ENST00000539599 CCDC105Q8IYK2 499 aa15.12■□□□□ 0.01
UBE3B-210ENST00000539599 FAM71AQ8IYT1 594 aa15.12■□□□□ 0.01
UBE3B-210ENST00000539599 FLAD1Q8NFF5 587 aa15.12■□□□□ 0.01
UBE3B-210ENST00000539599 FAM213AQ9BRX8 229 aa15.12■□□□□ 0.01
UBE3B-210ENST00000539599 DDX23Q9BUQ8 820 aaKnown RBP15.12■□□□□ 0.01
UBE3B-210ENST00000539599 CCDC113Q9H0I3 377 aa15.12■□□□□ 0.01
UBE3B-210ENST00000539599 GABBR1Q9UBS5 961 aa15.12■□□□□ 0.01
UBE3B-210ENST00000539599 DDX20Q9UHI6 824 aaKnown RBP15.12■□□□□ 0.01
UBE3B-210ENST00000539599 DBR1Q9UK59 544 aaKnown RBP15.12■□□□□ 0.01
UBE3B-210ENST00000539599 RTN2O75298 545 aa15.11■□□□□ 0.01
UBE3B-210ENST00000539599 PPFIA2O75334 1257 aa15.11■□□□□ 0.01
UBE3B-210ENST00000539599 NF2P35240 595 aa15.11■□□□□ 0.01
UBE3B-210ENST00000539599 GJC1P36383 396 aa15.11■□□□□ 0.01
UBE3B-210ENST00000539599 SLC20A2Q08357 652 aa15.11■□□□□ 0.01
UBE3B-210ENST00000539599 OTUD6AQ7L8S5 288 aa15.11■□□□□ 0.01
UBE3B-210ENST00000539599 RHOT2Q8IXI1 618 aa15.11■□□□□ 0.01
UBE3B-210ENST00000539599 OTUD6BQ8N6M0 293 aa15.11■□□□□ 0.01
UBE3B-210ENST00000539599 PARD3BQ8TEW8 1205 aa15.11■□□□□ 0.01
UBE3B-210ENST00000539599 PDCD2LQ9BRP1 358 aa15.11■□□□□ 0.01
UBE3B-210ENST00000539599 MLXIPLQ9NP71 852 aa15.11■□□□□ 0.01
UBE3B-210ENST00000539599 TTC7AQ9ULT0 858 aaPredicted RBP15.11■□□□□ 0.01
UBE3B-210ENST00000539599 MEFVO15553 781 aaPredicted RBP15.11■□□□□ 0.01
UBE3B-210ENST00000539599 PHF2O75151 1096 aa15.11■□□□□ 0.01
UBE3B-210ENST00000539599 CCDC172P0C7W6 258 aa15.11■□□□□ 0.01
UBE3B-210ENST00000539599 CETN1Q12798 172 aa15.11■□□□□ 0.01
UBE3B-210ENST00000539599 TNIP1Q15025 636 aa15.11■□□□□ 0.01
UBE3B-210ENST00000539599 ARHGEF16Q5VV41 709 aa15.11■□□□□ 0.01
UBE3B-210ENST00000539599 PCNX4Q63HM2 1172 aa15.11■□□□□ 0.01
UBE3B-210ENST00000539599 SV2AQ7L0J3 742 aa15.11■□□□□ 0.01
UBE3B-210ENST00000539599 SAMD7Q7Z3H4 446 aa15.11■□□□□ 0.01
UBE3B-210ENST00000539599 TTLL6Q8N841 843 aa15.11■□□□□ 0.01
UBE3B-210ENST00000539599 CEP170P1Q96L14 293 aa15.11■□□□□ 0.01
UBE3B-210ENST00000539599 RPAP3Q9H6T3 665 aaPredicted RBP15.11■□□□□ 0.01
UBE3B-210ENST00000539599 FAM107AO95990 144 aa15.1■□□□□ 0.01
UBE3B-210ENST00000539599 CREB1P16220 341 aa15.1■□□□□ 0.01
UBE3B-210ENST00000539599 IFNAR2P48551 515 aa15.1■□□□□ 0.01
UBE3B-210ENST00000539599 ADCY1Q08828 1119 aa15.1■□□□□ 0.01
UBE3B-210ENST00000539599 BYSLQ13895 437 aaKnown RBP15.1■□□□□ 0.01
UBE3B-210ENST00000539599 ZKSCAN4Q969J2 545 aaPredicted RBP15.1■□□□□ 0.01
UBE3B-210ENST00000539599 PSMD1Q99460 953 aa15.1■□□□□ 0.01
UBE3B-210ENST00000539599 HEMGNQ9BXL5 484 aa15.1■□□□□ 0.01
UBE3B-210ENST00000539599 RAB17Q9H0T7 212 aa15.1■□□□□ 0.01
UBE3B-210ENST00000539599 SLC38A10Q9HBR0 1119 aa15.1■□□□□ 0.01
UBE3B-210ENST00000539599 KMT5AQ9NQR1 393 aa15.1■□□□□ 0.01
UBE3B-210ENST00000539599 CHST7Q9NS84 486 aa15.1■□□□□ 0.01
UBE3B-210ENST00000539599 NCKAP1LP55160 1127 aa15.1■□□□□ 0.01
UBE3B-210ENST00000539599 SIX1Q15475 284 aaPredicted RBP15.1■□□□□ 0.01
UBE3B-210ENST00000539599 ZBTB41Q5SVQ8 909 aa15.1■□□□□ 0.01
UBE3B-210ENST00000539599 FAM182AQ5T1J6 154 aa15.1■□□□□ 0.01
UBE3B-210ENST00000539599 RNF207Q6ZRF8 634 aa15.1■□□□□ 0.01
UBE3B-210ENST00000539599 UBL4BQ8N7F7 174 aa15.1■□□□□ 0.01
UBE3B-210ENST00000539599 ZNF526Q8TF50 670 aaPredicted RBP15.1■□□□□ 0.01
UBE3B-210ENST00000539599 CD101Q93033 1021 aa15.1■□□□□ 0.01
UBE3B-210ENST00000539599 PXMP2Q9NR77 195 aa15.1■□□□□ 0.01
UBE3B-210ENST00000539599 KLHL11Q9NVR0 708 aa15.1■□□□□ 0.01
UBE3B-210ENST00000539599 PCDHA3Q9Y5H8 950 aa15.1■□□□□ 0.01
UBE3B-210ENST00000539599 PTPRJQ12913 1337 aa15.09■□□□□ 0.01
UBE3B-210ENST00000539599 GMNCA6NCL1 334 aa15.09■□□□□ 0.01
UBE3B-210ENST00000539599 HNRNPDLO14979 420 aaKnown RBP15.09■□□□□ 0.01
UBE3B-210ENST00000539599 TRAPPC3O43617 180 aa15.09■□□□□ 0.01
UBE3B-210ENST00000539599 KIAA0754O94854 1291 aa15.09■□□□□ 0.01
UBE3B-210ENST00000539599 IBSPP21815 317 aaPredicted RBP15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms