RNA–Protein interactions for RNA: ENST00000539177.1

CCDC144NL-202, Transcript of coiled-coil domain containing 144 family, N-terminal like, humanhuman

TSL 3

Gene CCDC144NL, Length 443 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NL-202ENST00000539177 ZMYND10O75800 440 aa16.33■□□□□ 0.2
CCDC144NL-202ENST00000539177 CD72P21854 359 aa16.33■□□□□ 0.2
CCDC144NL-202ENST00000539177 CSTF1Q05048 431 aaKnown RBP16.33■□□□□ 0.2
CCDC144NL-202ENST00000539177 KRT32Q14532 448 aa16.33■□□□□ 0.2
CCDC144NL-202ENST00000539177 MLF2Q15773 248 aaPredicted RBP16.33■□□□□ 0.2
CCDC144NL-202ENST00000539177 TSGA10IPQ3SY00 556 aa16.33■□□□□ 0.2
CCDC144NL-202ENST00000539177 PRSS55Q6UWB4 352 aaPredicted RBP16.33■□□□□ 0.2
CCDC144NL-202ENST00000539177 CNNM3Q8NE01 707 aa16.33■□□□□ 0.2
CCDC144NL-202ENST00000539177 COLEC11Q9BWP8 271 aa16.33■□□□□ 0.2
CCDC144NL-202ENST00000539177 SLKQ9H2G2 1235 aaPredicted RBP16.33■□□□□ 0.2
CCDC144NL-202ENST00000539177 CHST7Q9NS84 486 aa16.33■□□□□ 0.2
CCDC144NL-202ENST00000539177 WRAP73Q9P2S5 460 aaPredicted RBP16.33■□□□□ 0.2
CCDC144NL-202ENST00000539177 SLC37A4O43826 429 aa16.32■□□□□ 0.2
CCDC144NL-202ENST00000539177 TSPAN1O60635 241 aa16.32■□□□□ 0.2
CCDC144NL-202ENST00000539177 PAPLNO95428 1278 aa16.32■□□□□ 0.2
CCDC144NL-202ENST00000539177 HMGB1P09429 215 aaKnown RBP16.32■□□□□ 0.2
CCDC144NL-202ENST00000539177 QARSP47897 775 aaKnown RBP16.32■□□□□ 0.2
CCDC144NL-202ENST00000539177 CCT2P78371 535 aaKnown RBP16.32■□□□□ 0.2
CCDC144NL-202ENST00000539177 EMC2Q15006 297 aa16.32■□□□□ 0.2
CCDC144NL-202ENST00000539177 NTRK3Q16288 839 aa16.32■□□□□ 0.2
CCDC144NL-202ENST00000539177 USP41Q3LFD5 358 aa16.32■□□□□ 0.2
CCDC144NL-202ENST00000539177 LILRA6Q6PI73 481 aa16.32■□□□□ 0.2
CCDC144NL-202ENST00000539177 HASPINQ8TF76 798 aa16.32■□□□□ 0.2
CCDC144NL-202ENST00000539177 KXD1Q9BQD3 176 aa16.32■□□□□ 0.2
CCDC144NL-202ENST00000539177 NXF3Q9H4D5 531 aaKnown RBP16.32■□□□□ 0.2
CCDC144NL-202ENST00000539177 DHX33Q9H6R0 707 aaKnown RBP16.32■□□□□ 0.2
CCDC144NL-202ENST00000539177 NCOA5Q9HCD5 579 aaKnown RBP16.32■□□□□ 0.2
CCDC144NL-202ENST00000539177 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.32■□□□□ 0.2
CCDC144NL-202ENST00000539177 DDX25Q9UHL0 483 aaKnown RBP16.32■□□□□ 0.2
CCDC144NL-202ENST00000539177 ADAM28Q9UKQ2 775 aa16.32■□□□□ 0.2
CCDC144NL-202ENST00000539177 CDH7Q9ULB5 785 aa16.32■□□□□ 0.2
CCDC144NL-202ENST00000539177 POLIQ9UNA4 740 aa16.32■□□□□ 0.2
CCDC144NL-202ENST00000539177 KMT2BQ9UMN6 2715 aaPredicted RBP16.32■□□□□ 0.2
CCDC144NL-202ENST00000539177 TPRP12270 2363 aaKnown RBP16.31■□□□□ 0.2
CCDC144NL-202ENST00000539177 RALGAPA1Q6GYQ0 2036 aa16.31■□□□□ 0.2
CCDC144NL-202ENST00000539177 SPTLC1O15269 473 aa16.31■□□□□ 0.2
CCDC144NL-202ENST00000539177 AKAP5P24588 427 aa16.31■□□□□ 0.2
CCDC144NL-202ENST00000539177 ATXN1P54253 815 aaKnown RBP16.31■□□□□ 0.2
CCDC144NL-202ENST00000539177 NOTUMQ6P988 496 aa16.31■□□□□ 0.2
CCDC144NL-202ENST00000539177 TSSK4Q6SA08 328 aa16.31■□□□□ 0.2
CCDC144NL-202ENST00000539177 FERMT3Q86UX7 667 aa16.31■□□□□ 0.2
CCDC144NL-202ENST00000539177 SKAP1Q86WV1 359 aa16.31■□□□□ 0.2
CCDC144NL-202ENST00000539177 CDR2LQ86X02 465 aaPredicted RBP16.31■□□□□ 0.2
CCDC144NL-202ENST00000539177 ATRIPQ8WXE1 791 aa16.31■□□□□ 0.2
CCDC144NL-202ENST00000539177 JAKMIP1Q96N16 626 aaKnown RBP16.31■□□□□ 0.2
CCDC144NL-202ENST00000539177 TRIM6Q9C030 488 aaPredicted RBP16.31■□□□□ 0.2
CCDC144NL-202ENST00000539177 KLK14Q9P0G3 267 aa16.31■□□□□ 0.2
CCDC144NL-202ENST00000539177 FNIP2Q9P278 1114 aa16.31■□□□□ 0.2
CCDC144NL-202ENST00000539177 FBXO4Q9UKT5 387 aa16.31■□□□□ 0.2
CCDC144NL-202ENST00000539177 PCDHA4Q9UN74 947 aa16.31■□□□□ 0.2
CCDC144NL-202ENST00000539177 SMG5Q9UPR3 1016 aaKnown RBP16.31■□□□□ 0.2
CCDC144NL-202ENST00000539177 TRIP11Q15643 1979 aa16.3■□□□□ 0.2
CCDC144NL-202ENST00000539177 EPG5Q9HCE0 2579 aa16.3■□□□□ 0.2
CCDC144NL-202ENST00000539177 CYP3A7-CYP3A51PA0A087WV96 503 aa16.3■□□□□ 0.2
CCDC144NL-202ENST00000539177 FAM170BA6NMN3 283 aa16.3■□□□□ 0.2
CCDC144NL-202ENST00000539177 INO80B-WBP1J3KQ70 363 aa16.3■□□□□ 0.2
CCDC144NL-202ENST00000539177 CCL16O15467 120 aa16.3■□□□□ 0.2
CCDC144NL-202ENST00000539177 IFNAR1P17181 557 aa16.3■□□□□ 0.2
CCDC144NL-202ENST00000539177 CYP3A7P24462 503 aa16.3■□□□□ 0.2
CCDC144NL-202ENST00000539177 RFC5P40937 340 aa16.3■□□□□ 0.2
CCDC144NL-202ENST00000539177 ZNF528Q3MIS6 628 aa16.3■□□□□ 0.2
CCDC144NL-202ENST00000539177 SLC44A4Q53GD3 710 aa16.3■□□□□ 0.2
CCDC144NL-202ENST00000539177 RTP2Q5QGT7 225 aa16.3■□□□□ 0.2
CCDC144NL-202ENST00000539177 LIN9Q5TKA1 542 aa16.3■□□□□ 0.2
CCDC144NL-202ENST00000539177 ITFG1Q8TB96 612 aa16.3■□□□□ 0.2
CCDC144NL-202ENST00000539177 TCP11Q8WWU5 503 aa16.3■□□□□ 0.2
CCDC144NL-202ENST00000539177 FGF13Q92913 245 aa16.3■□□□□ 0.2
CCDC144NL-202ENST00000539177 MBOAT7Q96N66 472 aa16.3■□□□□ 0.2
CCDC144NL-202ENST00000539177 DDX23Q9BUQ8 820 aaKnown RBP16.3■□□□□ 0.2
CCDC144NL-202ENST00000539177 C22orf23Q9BZE7 217 aa16.3■□□□□ 0.2
CCDC144NL-202ENST00000539177 CSRNP2Q9H175 543 aa16.3■□□□□ 0.2
CCDC144NL-202ENST00000539177 LTB4R2Q9NPC1 389 aa16.3■□□□□ 0.2
CCDC144NL-202ENST00000539177 FBXW11Q9UKB1 542 aa16.3■□□□□ 0.2
CCDC144NL-202ENST00000539177 VAV3Q9UKW4 847 aa16.3■□□□□ 0.2
CCDC144NL-202ENST00000539177 CDV3Q9UKY7 258 aaKnown RBP16.3■□□□□ 0.2
CCDC144NL-202ENST00000539177 USP18Q9UMW8 372 aa16.3■□□□□ 0.2
CCDC144NL-202ENST00000539177 ZFP37Q9Y6Q3 630 aaPredicted RBP16.3■□□□□ 0.2
CCDC144NL-202ENST00000539177 TICRRQ7Z2Z1 1910 aa16.29■□□□□ 0.2
CCDC144NL-202ENST00000539177 DCDC2BA2VCK2 349 aa16.29■□□□□ 0.2
CCDC144NL-202ENST00000539177 TADA2AO75478 443 aa16.29■□□□□ 0.2
CCDC144NL-202ENST00000539177 AXLP30530 894 aa16.29■□□□□ 0.2
CCDC144NL-202ENST00000539177 PRKCQQ04759 706 aa16.29■□□□□ 0.2
CCDC144NL-202ENST00000539177 INF2Q27J81 1249 aa16.29■□□□□ 0.2
CCDC144NL-202ENST00000539177 XKR9Q5GH70 373 aa16.29■□□□□ 0.2
CCDC144NL-202ENST00000539177 PPM1LQ5SGD2 360 aa16.29■□□□□ 0.2
CCDC144NL-202ENST00000539177 BLOC1S2Q6QNY1 142 aa16.29■□□□□ 0.2
CCDC144NL-202ENST00000539177 MTSS1LQ765P7 747 aa16.29■□□□□ 0.2
CCDC144NL-202ENST00000539177 CEP57Q86XR8 500 aa16.29■□□□□ 0.2
CCDC144NL-202ENST00000539177 BLIDQ8IZY5 108 aa16.29■□□□□ 0.2
CCDC144NL-202ENST00000539177 GSTCDQ8NEC7 633 aa16.29■□□□□ 0.2
CCDC144NL-202ENST00000539177 MTRQ99707 1265 aa16.29■□□□□ 0.2
CCDC144NL-202ENST00000539177 PAAF1Q9BRP4 392 aa16.29■□□□□ 0.2
CCDC144NL-202ENST00000539177 LXNQ9BS40 222 aa16.29■□□□□ 0.2
CCDC144NL-202ENST00000539177 PHF20Q9BVI0 1012 aa16.29■□□□□ 0.2
CCDC144NL-202ENST00000539177 SH3GLB2Q9NR46 395 aa16.29■□□□□ 0.2
CCDC144NL-202ENST00000539177 GIT1Q9Y2X7 761 aa16.29■□□□□ 0.2
CCDC144NL-202ENST00000539177 PCDHGA2Q9Y5H1 932 aa16.29■□□□□ 0.2
CCDC144NL-202ENST00000539177 SF3B1O75533 1304 aaKnown RBP eCLIP16.28■□□□□ 0.26e-8■■■■■ 80.2
CCDC144NL-202ENST00000539177 ZBTB39O15060 712 aa16.28■□□□□ 0.2
CCDC144NL-202ENST00000539177 ASAP2O43150 1006 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms