RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 ZBP1Q9H171 429 aa19.7■□□□□ 0.74
TNFRSF1A-209ENST00000536717 LIG1P18858 919 aa19.69■□□□□ 0.74
TNFRSF1A-209ENST00000536717 EFNA5P52803 228 aa19.69■□□□□ 0.74
TNFRSF1A-209ENST00000536717 PEX3P56589 373 aa19.69■□□□□ 0.74
TNFRSF1A-209ENST00000536717 DSC1Q08554 894 aa19.69■□□□□ 0.74
TNFRSF1A-209ENST00000536717 ATL3Q6DD88 541 aa19.69■□□□□ 0.74
TNFRSF1A-209ENST00000536717 DDX53Q86TM3 631 aaKnown RBP19.69■□□□□ 0.74
TNFRSF1A-209ENST00000536717 CABP7Q86V35 215 aa19.69■□□□□ 0.74
TNFRSF1A-209ENST00000536717 COLGALT2Q8IYK4 626 aa19.69■□□□□ 0.74
TNFRSF1A-209ENST00000536717 HACE1Q8IYU2 909 aa19.69■□□□□ 0.74
TNFRSF1A-209ENST00000536717 VPS52Q8N1B4 723 aa19.69■□□□□ 0.74
TNFRSF1A-209ENST00000536717 MRPL43Q8N983 215 aaKnown RBP19.69■□□□□ 0.74
TNFRSF1A-209ENST00000536717 SYT2Q8N9I0 419 aaPredicted RBP19.69■□□□□ 0.74
TNFRSF1A-209ENST00000536717 CD207Q9UJ71 328 aa19.69■□□□□ 0.74
TNFRSF1A-209ENST00000536717 C2orf71A6NGG8 1288 aa19.68■□□□□ 0.74
TNFRSF1A-209ENST00000536717 NRP1O14786 923 aa19.68■□□□□ 0.74
TNFRSF1A-209ENST00000536717 N4BP3O15049 544 aa19.68■□□□□ 0.74
TNFRSF1A-209ENST00000536717 NPTX2P47972 431 aa19.68■□□□□ 0.74
TNFRSF1A-209ENST00000536717 SLC12A3P55017 1021 aa19.68■□□□□ 0.74
TNFRSF1A-209ENST00000536717 CEBPZQ03701 1054 aaKnown RBP19.68■□□□□ 0.74
TNFRSF1A-209ENST00000536717 SMAD4Q13485 552 aaKnown RBP19.68■□□□□ 0.74
TNFRSF1A-209ENST00000536717 SMC1AQ14683 1233 aaKnown RBP19.68■□□□□ 0.74
TNFRSF1A-209ENST00000536717 SMAD2Q15796 467 aaKnown RBP19.68■□□□□ 0.74
TNFRSF1A-209ENST00000536717 EEF1DP3Q658K8 133 aa19.68■□□□□ 0.74
TNFRSF1A-209ENST00000536717 LRRC15Q8TF66 581 aa19.68■□□□□ 0.74
TNFRSF1A-209ENST00000536717 USP28Q96RU2 1077 aa19.68■□□□□ 0.74
TNFRSF1A-209ENST00000536717 FAN1Q9Y2M0 1017 aa19.68■□□□□ 0.74
TNFRSF1A-209ENST00000536717 CLIC4Q9Y696 253 aa19.68■□□□□ 0.74
TNFRSF1A-209ENST00000536717 ZMYM2Q9UBW7 1377 aa19.68■□□□□ 0.74
TNFRSF1A-209ENST00000536717 FSD2A1L4K1 749 aa19.67■□□□□ 0.74
TNFRSF1A-209ENST00000536717 ALDH2P05091 517 aa19.67■□□□□ 0.74
TNFRSF1A-209ENST00000536717 CTSAP10619 480 aa19.67■□□□□ 0.74
TNFRSF1A-209ENST00000536717 GUCY2CP25092 1073 aa19.67■□□□□ 0.74
TNFRSF1A-209ENST00000536717 COASYQ13057 564 aa19.67■□□□□ 0.74
TNFRSF1A-209ENST00000536717 PTPAQ15257 358 aa19.67■□□□□ 0.74
TNFRSF1A-209ENST00000536717 NT5DC1Q5TFE4 455 aa19.67■□□□□ 0.74
TNFRSF1A-209ENST00000536717 TMEM184AQ6ZMB5 413 aa19.67■□□□□ 0.74
TNFRSF1A-209ENST00000536717 SMRP1Q8NCR6 262 aa19.67■□□□□ 0.74
TNFRSF1A-209ENST00000536717 AUTS2Q8WXX7 1259 aa19.67■□□□□ 0.74
TNFRSF1A-209ENST00000536717 CDK5RAP3Q96JB5 506 aa19.67■□□□□ 0.74
TNFRSF1A-209ENST00000536717 DRC1Q96MC2 740 aa19.67■□□□□ 0.74
TNFRSF1A-209ENST00000536717 MARCH5Q9NX47 278 aa19.67■□□□□ 0.74
TNFRSF1A-209ENST00000536717 KLK14Q9P0G3 267 aa19.67■□□□□ 0.74
TNFRSF1A-209ENST00000536717 ARHGAP28Q9P2N2 729 aa19.67■□□□□ 0.74
TNFRSF1A-209ENST00000536717 PARP2Q9UGN5 583 aa19.67■□□□□ 0.74
TNFRSF1A-209ENST00000536717 CFAP45Q9UL16 551 aa19.67■□□□□ 0.74
TNFRSF1A-209ENST00000536717 FAM50BQ9Y247 325 aa19.67■□□□□ 0.74
TNFRSF1A-209ENST00000536717 IRAK3Q9Y616 596 aa19.67■□□□□ 0.74
TNFRSF1A-209ENST00000536717 CCDC169A6NNP5 214 aa19.66■□□□□ 0.74
TNFRSF1A-209ENST00000536717 SFI1A8K8P3 1242 aa19.66■□□□□ 0.74
TNFRSF1A-209ENST00000536717 SLC26A4O43511 780 aa19.66■□□□□ 0.74
TNFRSF1A-209ENST00000536717 SSBP05455 408 aaKnown RBP eCLIP19.66■□□□□ 0.74
TNFRSF1A-209ENST00000536717 PLA2G4BP0C869 781 aa19.66■□□□□ 0.74
TNFRSF1A-209ENST00000536717 DNM1Q05193 864 aaKnown RBP19.66■□□□□ 0.74
TNFRSF1A-209ENST00000536717 RAD51AP2Q09MP3 1159 aa19.66■□□□□ 0.74
TNFRSF1A-209ENST00000536717 DMP1Q13316 513 aaPredicted RBP19.66■□□□□ 0.74
TNFRSF1A-209ENST00000536717 TMEM132AQ24JP5 1023 aa19.66■□□□□ 0.74
TNFRSF1A-209ENST00000536717 TAS1R3Q7RTX0 852 aa19.66■□□□□ 0.74
TNFRSF1A-209ENST00000536717 TIPINQ9BVW5 301 aa19.66■□□□□ 0.74
TNFRSF1A-209ENST00000536717 C17orf75Q9HAS0 396 aa19.66■□□□□ 0.74
TNFRSF1A-209ENST00000536717 SNTG2Q9NY99 539 aa19.66■□□□□ 0.74
TNFRSF1A-209ENST00000536717 PHLPP2Q6ZVD8 1323 aa19.66■□□□□ 0.74
TNFRSF1A-209ENST00000536717 PDCD11Q14690 1871 aaKnown RBP19.66■□□□□ 0.74
TNFRSF1A-209ENST00000536717 K7ERI5 159 aa19.66■□□□□ 0.74
TNFRSF1A-209ENST00000536717 CXCL14O95715 111 aa19.66■□□□□ 0.74
TNFRSF1A-209ENST00000536717 LONP1P36776 959 aaKnown RBP19.66■□□□□ 0.74
TNFRSF1A-209ENST00000536717 UBA7P41226 1012 aa19.66■□□□□ 0.74
TNFRSF1A-209ENST00000536717 KRT85P78386 507 aa19.66■□□□□ 0.74
TNFRSF1A-209ENST00000536717 KHSRPQ92945 711 aaKnown RBP eCLIP19.66■□□□□ 0.74
TNFRSF1A-209ENST00000536717 ADPGKQ9BRR6 497 aa19.66■□□□□ 0.74
TNFRSF1A-209ENST00000536717 TMEM134Q9H6X4 195 aa19.66■□□□□ 0.74
TNFRSF1A-209ENST00000536717 KMT5AQ9NQR1 393 aa19.66■□□□□ 0.74
TNFRSF1A-209ENST00000536717 BLOC1S4Q9NUP1 217 aa19.66■□□□□ 0.74
TNFRSF1A-209ENST00000536717 TFIP11Q9UBB9 837 aaKnown RBP19.66■□□□□ 0.74
TNFRSF1A-209ENST00000536717 PRG3Q9Y2Y8 225 aaPredicted RBP19.66■□□□□ 0.74
TNFRSF1A-209ENST00000536717 MTCL1Q9Y4B5 1905 aaKnown RBP19.65■□□□□ 0.74
TNFRSF1A-209ENST00000536717 PLXNA3P51805 1871 aa19.65■□□□□ 0.74
TNFRSF1A-209ENST00000536717 NASPP49321 788 aaPredicted RBP19.65■□□□□ 0.74
TNFRSF1A-209ENST00000536717 ZP2Q05996 745 aa19.65■□□□□ 0.74
TNFRSF1A-209ENST00000536717 GRIK3Q13003 919 aa19.65■□□□□ 0.74
TNFRSF1A-209ENST00000536717 KARSQ15046 597 aaKnown RBP19.65■□□□□ 0.74
TNFRSF1A-209ENST00000536717 STK38Q15208 465 aa19.65■□□□□ 0.74
TNFRSF1A-209ENST00000536717 ATF7IP2Q5U623 682 aa19.65■□□□□ 0.74
TNFRSF1A-209ENST00000536717 GJD3Q8N144 294 aa19.65■□□□□ 0.74
TNFRSF1A-209ENST00000536717 CALML4Q96GE6 196 aa19.65■□□□□ 0.74
TNFRSF1A-209ENST00000536717 CXCL16Q9H2A7 254 aa19.65■□□□□ 0.74
TNFRSF1A-209ENST00000536717 KCND2Q9NZV8 630 aa19.65■□□□□ 0.74
TNFRSF1A-209ENST00000536717 PRKAG3Q9UGI9 489 aa19.65■□□□□ 0.74
TNFRSF1A-209ENST00000536717 HCFC2Q9Y5Z7 792 aa19.65■□□□□ 0.74
TNFRSF1A-209ENST00000536717 TRIOO75962 3097 aa19.64■□□□□ 0.73
TNFRSF1A-209ENST00000536717 VWA8A3KMH1 1905 aa19.64■□□□□ 0.73
TNFRSF1A-209ENST00000536717 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.64■□□□□ 0.73
TNFRSF1A-209ENST00000536717 F8W810 466 aa19.64■□□□□ 0.73
TNFRSF1A-209ENST00000536717 CLASP2O75122 1294 aaKnown RBP19.64■□□□□ 0.73
TNFRSF1A-209ENST00000536717 RECQL4O94761 1208 aa19.64■□□□□ 0.73
TNFRSF1A-209ENST00000536717 EFEMP2O95967 443 aa19.64■□□□□ 0.73
TNFRSF1A-209ENST00000536717 MARCKSP29966 332 aaPredicted RBP19.64■□□□□ 0.73
TNFRSF1A-209ENST00000536717 CA8P35219 290 aa19.64■□□□□ 0.73
TNFRSF1A-209ENST00000536717 OR1G1P47890 313 aa19.64■□□□□ 0.73
TNFRSF1A-209ENST00000536717 BMS1Q14692 1282 aaKnown RBP19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms