RNA–Protein interactions for RNA: ENST00000536011.5

RTN3-207, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-207ENST00000536011 TECTAO75443 2155 aa14.53□□□□□ -0.08
RTN3-207ENST00000536011 A0A1B0GUA9 196 aa14.52□□□□□ -0.09
RTN3-207ENST00000536011 N4BP3O15049 544 aa14.52□□□□□ -0.09
RTN3-207ENST00000536011 NPTXRO95502 500 aa14.52□□□□□ -0.09
RTN3-207ENST00000536011 SSBP05455 408 aaKnown RBP eCLIP14.52□□□□□ -0.09
RTN3-207ENST00000536011 CNPP09543 421 aaKnown RBP14.52□□□□□ -0.09
RTN3-207ENST00000536011 SP100P23497 879 aaPredicted RBP14.52□□□□□ -0.09
RTN3-207ENST00000536011 GLUD2P49448 558 aa14.52□□□□□ -0.09
RTN3-207ENST00000536011 SCNN1GP51170 649 aa14.52□□□□□ -0.09
RTN3-207ENST00000536011 AFF1P51825 1210 aaKnown RBP14.52□□□□□ -0.09
RTN3-207ENST00000536011 CREMQ03060 361 aa14.52□□□□□ -0.09
RTN3-207ENST00000536011 DSC1Q08554 894 aa14.52□□□□□ -0.09
RTN3-207ENST00000536011 GRIK3Q13003 919 aa14.52□□□□□ -0.09
RTN3-207ENST00000536011 MTMR3Q13615 1198 aa14.52□□□□□ -0.09
RTN3-207ENST00000536011 ZNF174Q15697 407 aa14.52□□□□□ -0.09
RTN3-207ENST00000536011 MAPK6Q16659 721 aa14.52□□□□□ -0.09
RTN3-207ENST00000536011 CDCA2Q69YH5 1023 aaPredicted RBP14.52□□□□□ -0.09
RTN3-207ENST00000536011 POTEGQ6S5H5 508 aa14.52□□□□□ -0.09
RTN3-207ENST00000536011 COLGALT2Q8IYK4 626 aa14.52□□□□□ -0.09
RTN3-207ENST00000536011 PLCD3Q8N3E9 789 aa14.52□□□□□ -0.09
RTN3-207ENST00000536011 FBXL6Q8N531 539 aa14.52□□□□□ -0.09
RTN3-207ENST00000536011 ACSF2Q96CM8 615 aaPredicted RBP14.52□□□□□ -0.09
RTN3-207ENST00000536011 ZFP42Q96MM3 310 aa14.52□□□□□ -0.09
RTN3-207ENST00000536011 KLHL5Q96PQ7 755 aa14.52□□□□□ -0.09
RTN3-207ENST00000536011 ADPGKQ9BRR6 497 aa14.52□□□□□ -0.09
RTN3-207ENST00000536011 SORCS3Q9UPU3 1222 aa14.52□□□□□ -0.09
RTN3-207ENST00000536011 HES2Q9Y543 173 aa14.52□□□□□ -0.09
RTN3-207ENST00000536011 B4GALT5O43286 388 aa14.51□□□□□ -0.09
RTN3-207ENST00000536011 MED24O75448 989 aa14.51□□□□□ -0.09
RTN3-207ENST00000536011 NAMPTP43490 491 aa14.51□□□□□ -0.09
RTN3-207ENST00000536011 CLCN4P51793 760 aa14.51□□□□□ -0.09
RTN3-207ENST00000536011 PRPF4BQ13523 1007 aaKnown RBP14.51□□□□□ -0.09
RTN3-207ENST00000536011 FAM187BQ17R55 369 aa14.51□□□□□ -0.09
RTN3-207ENST00000536011 PADI6Q6TGC4 694 aa14.51□□□□□ -0.09
RTN3-207ENST00000536011 TMC5Q6UXY8 1006 aa14.51□□□□□ -0.09
RTN3-207ENST00000536011 C15orf39Q6ZRI6 1047 aa14.51□□□□□ -0.09
RTN3-207ENST00000536011 CCDC149Q6ZUS6 474 aa14.51□□□□□ -0.09
RTN3-207ENST00000536011 MAEAQ7L5Y9 396 aa14.51□□□□□ -0.09
RTN3-207ENST00000536011 APBB1IPQ7Z5R6 666 aaPredicted RBP14.51□□□□□ -0.09
RTN3-207ENST00000536011 DEPTORQ8TB45 409 aa14.51□□□□□ -0.09
RTN3-207ENST00000536011 IFT74Q96LB3 600 aa14.51□□□□□ -0.09
RTN3-207ENST00000536011 GPRC5CQ9NQ84 441 aa14.51□□□□□ -0.09
RTN3-207ENST00000536011 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.51□□□□□ -0.09
RTN3-207ENST00000536011 MARCH5Q9NX47 278 aa14.51□□□□□ -0.09
RTN3-207ENST00000536011 ZNF318Q5VUA4 2279 aa14.51□□□□□ -0.09
RTN3-207ENST00000536011 C2CD4DB7Z1M9 353 aa14.5□□□□□ -0.09
RTN3-207ENST00000536011 LAD1O00515 517 aa14.5□□□□□ -0.09
RTN3-207ENST00000536011 C2CD2LO14523 706 aa14.5□□□□□ -0.09
RTN3-207ENST00000536011 ST18O60284 1047 aa14.5□□□□□ -0.09
RTN3-207ENST00000536011 LILRB3O75022 631 aa14.5□□□□□ -0.09
RTN3-207ENST00000536011 C1RP00736 705 aa14.5□□□□□ -0.09
RTN3-207ENST00000536011 CYP11B2P19099 503 aa14.5□□□□□ -0.09
RTN3-207ENST00000536011 CCT6AP40227 531 aaKnown RBP14.5□□□□□ -0.09
RTN3-207ENST00000536011 EFNA5P52803 228 aa14.5□□□□□ -0.09
RTN3-207ENST00000536011 CYP26C1Q6V0L0 522 aa14.5□□□□□ -0.09
RTN3-207ENST00000536011 OTOP3Q7RTS5 596 aa14.5□□□□□ -0.09
RTN3-207ENST00000536011 GPR149Q86SP6 731 aa14.5□□□□□ -0.09
RTN3-207ENST00000536011 GPR65Q8IYL9 337 aa14.5□□□□□ -0.09
RTN3-207ENST00000536011 ZDHHC14Q8IZN3 488 aa14.5□□□□□ -0.09
RTN3-207ENST00000536011 C12orf76Q8N812 135 aaPredicted RBP14.5□□□□□ -0.09
RTN3-207ENST00000536011 KREMEN2Q8NCW0 462 aa14.5□□□□□ -0.09
RTN3-207ENST00000536011 KIFAP3Q92845 792 aa14.5□□□□□ -0.09
RTN3-207ENST00000536011 FZD8Q9H461 694 aa14.5□□□□□ -0.09
RTN3-207ENST00000536011 LRWD1Q9UFC0 647 aa14.5□□□□□ -0.09
RTN3-207ENST00000536011 PARP2Q9UGN5 583 aa14.5□□□□□ -0.09
RTN3-207ENST00000536011 TDRD15B5MCY1 1934 aaKnown RBP14.5□□□□□ -0.09
RTN3-207ENST00000536011 SF3B1O75533 1304 aaKnown RBP eCLIP14.49□□□□□ -0.096e-9■■■■■ 64.2
RTN3-207ENST00000536011 PHLPP2Q6ZVD8 1323 aa14.49□□□□□ -0.09
RTN3-207ENST00000536011 A0A087WWV3 80 aa14.49□□□□□ -0.09
RTN3-207ENST00000536011 GLUD1P00367 558 aa14.49□□□□□ -0.09
RTN3-207ENST00000536011 PRKCBP05771 671 aa14.49□□□□□ -0.09
RTN3-207ENST00000536011 AKAP5P24588 427 aa14.49□□□□□ -0.09
RTN3-207ENST00000536011 U2AF2P26368 475 aaKnown RBP eCLIP14.49□□□□□ -0.093e-6■■■□□ 15.2
RTN3-207ENST00000536011 PTPN5P54829 565 aa14.49□□□□□ -0.09
RTN3-207ENST00000536011 DSG1Q02413 1049 aa14.49□□□□□ -0.09
RTN3-207ENST00000536011 PDIA5Q14554 519 aa14.49□□□□□ -0.09
RTN3-207ENST00000536011 USP41Q3LFD5 358 aa14.49□□□□□ -0.09
RTN3-207ENST00000536011 DCAF4L1Q3SXM0 396 aa14.49□□□□□ -0.09
RTN3-207ENST00000536011 RNF168Q8IYW5 571 aaPredicted RBP14.49□□□□□ -0.09
RTN3-207ENST00000536011 CMASQ8NFW8 434 aaPredicted RBP14.49□□□□□ -0.09
RTN3-207ENST00000536011 MAN1C1Q9NR34 630 aa14.49□□□□□ -0.09
RTN3-207ENST00000536011 CDH22Q9UJ99 828 aa14.49□□□□□ -0.09
RTN3-207ENST00000536011 ADAM28Q9UKQ2 775 aa14.49□□□□□ -0.09
RTN3-207ENST00000536011 ZDBF2Q9HCK1 2354 aa14.48□□□□□ -0.09
RTN3-207ENST00000536011 ACKR2O00590 384 aa14.48□□□□□ -0.09
RTN3-207ENST00000536011 TEX28O15482 410 aa14.48□□□□□ -0.09
RTN3-207ENST00000536011 WEE2P0C1S8 567 aa14.48□□□□□ -0.09
RTN3-207ENST00000536011 NHLH1Q02575 133 aa14.48□□□□□ -0.09
RTN3-207ENST00000536011 RABEP1Q15276 862 aa14.48□□□□□ -0.09
RTN3-207ENST00000536011 KIAA0319Q5VV43 1072 aa14.48□□□□□ -0.09
RTN3-207ENST00000536011 FUT10Q6P4F1 479 aa14.48□□□□□ -0.09
RTN3-207ENST00000536011 CDR2LQ86X02 465 aaPredicted RBP14.48□□□□□ -0.09
RTN3-207ENST00000536011 SNX29Q8TEQ0 813 aa14.48□□□□□ -0.09
RTN3-207ENST00000536011 HDAC7Q8WUI4 952 aa14.48□□□□□ -0.09
RTN3-207ENST00000536011 STAMQ92783 540 aa14.48□□□□□ -0.09
RTN3-207ENST00000536011 ASIC4Q96FT7 647 aa14.48□□□□□ -0.09
RTN3-207ENST00000536011 RHOBTB2Q9BYZ6 727 aa14.48□□□□□ -0.09
RTN3-207ENST00000536011 IRF2BPLQ9H1B7 796 aa14.48□□□□□ -0.09
RTN3-207ENST00000536011 BHMT2Q9H2M3 363 aa14.48□□□□□ -0.09
RTN3-207ENST00000536011 PDZD7Q9H5P4 517 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms